Rissa tridactyla (black-legged kittiwake): 128917533
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Entry
128917533 CDS
T09443
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128917533 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
128917533
NCBI-ProteinID:
XP_054076742
LinkDB
All DBs
Position
14:3033500..3078363
Genome browser
AA seq
2549 aa
AA seq
DB search
MERLLAPGFLVLLLPALTRGLRCTQLAESCLNGGKCETFLNGTEVCQCSGAYVGERCQLP
NPCLSSPCKNAGTCTPVVRGSTVDYTCACRLGFTDELCLTPRDNVCLSNPCRNGGTCDLL
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYICRCTAGFHGANCKQDVN
ECNISPSVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQIGDTT
YDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFHGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFSGAHCEIDIDECNPDPCHYGTCKDSIAAFTCLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCLCLKGTTGPNCEINLDDCASSPCDYGKCIDKIN
GYECTCEPGYTGRMCNINIDECSSNPCHNGGTCKDGINGFTCLCPEGFHDPKCLSEVNEC
NSNPCIHGKCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGSPCKN
GGECQESEDYESFSCSCPSGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFT
GRNCDTDIDDCKPNPCHNGGSCSDGVGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCVCPPGFTGSYCEH
DINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCAPAFTG
PECQYPASSPCTSTPCYNGGTCEFFSDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDI
IPPKIEEKCEIAVCAGYAGNKICDAKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMSSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTKNSQLYPMYVVV
AVLVLLVFIGVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNN
VEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKP
STKGLSCNGKDAKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQDMAMGNSSRMAFDSVPPRLSHLPVSSPS
TVMSNAPMNFSVGGAAGLNGQCDWLTRLQNGMVQNQYNPMRGNMQPGAHQQTQNLQHGMM
TSLHNGLPTTSLSQMMSYQAMPNTRLASQPHLMQSQQLQQMQQQQLQQQNMQPQQQPQQQ
QPQPQQQQPQQHHNPSSNASGHIGQNFLGTELSQPDMQPVSSNTMAVHTILPQDSQMLPT
SLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPH
SNVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7650 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctcctggcgcccggcttcctggtgctcctgctgcccgccctgacgcgaggt
ttacggtgcacacagcttgctgaatcctgcctcaacgggggcaagtgtgaaacttttctc
aatgggacggaggtgtgccagtgtagcggtgcctacgtgggcgagcggtgccagttgccc
aacccctgcctcagctccccctgcaagaacgccggcacctgcaccccggtggtgcgcggc
agcaccgtggactacacctgcgcctgccgcctgggcttcaccgacgagctctgcctgacg
ccccgcgacaacgtctgcctcagcaacccctgccgcaacgggggcacctgcgacctgctg
acgctcagcgagtacaagtgccgctgcccaccgggctggtcaggcaaaacctgccagcag
gccgacccctgtgcctccaacccctgcgccaacggcggccagtgcgtccccttcgaagcc
cactacatctgccggtgcaccgccggcttccacggggccaactgcaagcaggacgtgaac
gaatgcaacatctcaccctccgtctgcaagaacggcgggagctgcaccaacgaggtgggc
acctaccagtgctcctgcaagccggcgtacaccgggcagaactgcgagcacctctacgtg
ccctgcaacccctcgccctgccagaacggggggacgtgccgccagattggagacaccacc
tacgactgcacctgcctgccagggttcacgggtcagaactgtgaggagaacatcaatgac
tgtccgggcaacaactgcaagaatgggggcacctgcgtggacggtgtcaacacctacaac
tgccaatgtccgcctgagtggacaggtcagtactgcaccgaggacgtggacgagtgccag
ctgatgcccaacgcctgccagaacgggggcacctgccacaacaaccatggcggctacaac
tgcgtctgcgtcaatggctggacgggtgaggactgcagcgagaacattgatgactgtgcc
atggccgcctgcttccatggggccacctgccacgaccgggtggcctctttctactgcgag
tgcccccacggccgcacaggtttgctgtgccaccttgatgacgcctgcatcagcaacccc
tgcaacgagggctccaactgcgacaccaaccccgttaacggcaaagccatctgcacgtgt
ccttcggggtacatggggcccgcctgcaaccaggacgtggacgagtgctcgctgggagcc
aacccttgtgagcacgcagggaagtgcatcaacacccaggggtccttccagtgccagtgc
ctgcagggctattcgggccctcgctgcgagatcgatgtcaacgagtgtctctccaacccc
tgccagaacgatgccacctgcctggaccagatcggggagttccagtgcatctgcatgccc
ggttacgagggggtttactgcgagatcaacacggacgagtgtgccagcagcccctgcctg
cacaacggcaactgcctcgacaagatcaacgagttccactgcgagtgccccactggcttc
aacgggcacctgtgccagttcgacatcgacgagtgcgccagcaccccctgcaagaacggc
gccaagtgcgtggacggccccaacacctacagctgcgagtgcaccgaaggtttctcgggc
gctcactgcgagatcgacatcgatgagtgcaaccctgacccgtgccactatgggacctgc
aaggacagcatcgccgccttcacctgcctctgccagcccggctacacaggccaccgctgc
gacatcaacatcaacgagtgccagagccagccctgcaaaaacggggggacctgccaggac
aggaacaacgcctacaactgcctctgcctcaaagggaccacagggcccaactgcgagatc
aacctggacgactgcgccagcagcccctgcgactacggcaagtgcatcgacaagatcaac
ggctacgagtgcacctgcgagccggggtacacagggcgaatgtgcaacatcaacatcgat
gagtgctccagcaacccttgccacaatgggggcacgtgcaaggatggcatcaatggcttc
acctgcctctgccccgagggcttccacgaccccaagtgcctgtctgaagtgaacgagtgc
aacagcaacccctgcatccacgggaaatgccacgacgggctcaacggctataggtgtgac
tgcgacccaggctggagtgggacaaactgcgacattaacaataacgagtgtgaatccaat
ccctgcatgaacggtggcacctgcaaggacatgaccagcggctacatctgcacctgcagg
gagggcttcagcggacccaactgccagaccaatatcaacgaatgcgcttccaacccctgc
ctgaaccagggcacctgcatcgacgatgtcgctggctacacctgcaactgtctcctgccc
tacacaggagccacctgtgaggatgtgctggccccctgcgctggcagcccctgcaagaac
ggtggcgagtgccaggagtcagaagactacgagagcttctcctgcagttgcccctctggc
tggcaaggtcagacctgcgagattgacatcaacgagtgcgtgaagagcccctgccgcaat
ggggccacgtgccagaacaccaatgggagctaccgctgcgcctgcagaaccggcttcacc
ggccgcaactgcgacaccgacatcgatgactgcaagcccaatccatgccacaatggtggc
tcctgctccgatggcgtcggcacgttcttctgcgagtgcctggccggtttccgtgggccc
aagtgcgaggaggacatcaatgagtgtgccagcaacccctgcaagaatggcgccaactgc
accgactgtgtcaacagctacacctgcacttgcccctctggcttcagcggcatccactgc
gagaacaacacgcctgactgcaccgagagctcctgcttcaacggtgggacctgcgtggat
ggcatcaacaccttcacctgcgtctgcccgcccggcttcacgggcagctactgcgagcat
gacatcaacgagtgtgactccaagccatgcctgaacgggggcacgtgtcaggacagctac
gggacatacaagtgcacttgtccccagggatacaccgggctcaactgccagaacctggtg
cgttggtgcgactcctctccctgcaaaaacggaggcaagtgctggcagaccaacaacctg
taccgctgcgagtgcaacagcgggtggacagggctctactgcgatgtccccagtgtctcc
tgcgaggtggctgctaagcagcaaggtatcgatgtagcacatctctgcaggaattcaggg
ctgtgtgtggacactggcaacactcacttctgccgctgccaggccggttataccggcagc
tactgcgaggagcaggtggatgagtgttctcccaacccctgccagaatggagccacctgc
acagactacctgggaggctactcctgcgagtgtgtggctggttatcatggagttaactgc
tcagaggagatcaatgagtgcttgtcccacccatgccagaatggaggaacctgcatcgat
ctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccctggggcccaagtgctttaac
aatggcaagtgcacggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagacgtcaacgagtgcctgtccaacccctgcgatgcccgcggc
acccagaactgcgtgcagcgggtcaatgactacaaatgcgagtgccgaccgggctatgca
ggccgtcgctgcgacaccgtggtggatggctgtaaaggcaaaccctgcaggaacggtgga
acgtgcgcggttgccagcaacactggccgtggcttcatctgcaaatgtcccccgggtttt
gtgggtgccacctgcgagaacgactcccgcacctgtgggaacctccactgcctgaacggt
ggcacctgcatctccatccacaagagttccaagtgcatgtgcgcgccggccttcacgggt
cccgagtgccagtacccagccagcagcccctgcacatccaccccctgctacaacgggggc
acctgcgagttcttcagcgatgcctccccctactaccgctgcaactgccctgccaacttc
aacggcctcaactgccacatccttgacttcgatttccaaggtgggatcgggcaggatatc
atcccccccaaaattgaggagaagtgcgagattgccgtttgcgcggggtacgccggcaac
aagatctgcgatgcgaaatgcaacaaccatgcctgtggctgggacgggggcgactgctcc
ctcaatttcaatgacccctggaagaactgctcccagtctctgcagtgctggaaatacttc
aacgatggcaagtgcgactctcagtgcaataacgccggctgcctgtacgatggatttgac
tgccagaaatacgaagggcagtgcaaccctctgtatgaccagtactgcaaagatcacttc
tcagatggtcactgtgaccagggctgcaataattttgagtgcgaatgggatggtctggac
tgtgcaaacaacatgccggagaagcttgcggacggcacgctggtggtggtggtcctcatc
actcccgagaacctgaagaacaactccttcaacttcctgcgggagctgagccgcgtgctg
cacaccaacgtggtcttcaagaagaaccccaagggggagtatatgatctttccatactac
ggcaatgaggaggagctgaaaaagcattacatcaagaggtcaacagaggactggtcagat
atgtctagtgctgtcatcaacaaagtgaagagcagcctctactccagggctggcagaagg
cagaagagagagctcgatcagatggacatcagaggatccatcgtctacttggaaatcgat
aaccgccagtgcatccagtcgtcttcccagtgcttccagagcgcaaccgatgtggcggcg
ttcctgggggccttggcctccctcggcaacctgaacataccctacaaaatagaagccgtt
aaaagtgaaacagctgagcccacgaagaactcccagctgtatcctatgtacgtggtggtg
gctgtgctggtcttgcttgttttcattggagtgggagtactggtgtctcgtaagcggcgc
agggagcatgggcagctttggttcccagaaggcttcaaagtgacagagtcgagcaagaag
aagcgacgagaaccacttggggaggattctgttggactgaaacccctcaaaaatgcttca
gacggcacgctgatggatgacaaccaaaatgagtggggtgatgaggagaccttggacacc
aagaagttcaggttcgaggagcaggcgatgctgcccgacacggacgatcagacggaccac
aggcagtggacccagcagcacctggatgccgctgacctgcgcatatcctccatggcgccc
accccaccgcagggggaaatcgatgcagactgtatggatgtcaacgtcagaggtcccgat
ggcttcacccccctcatgatcgcctcgtgcagcggaggagggctggagaccggcaatagc
gaagaagaagacgatgctcctgccgtcatctccgatttcatttaccaaggcgccagctta
cacaaccagactgaccgcaccggcgagacggcgcttcacctggcggccaggtactcccgc
tcggacgctgccaagcgtctgctggaagccagtgctgatgcaaacatccaggataacatg
ggcaggacacccctccacgccgccgtctctgccgatgcccaaggagtcttccagatcctc
attaggaacagggcaaccgatctcgacgcccggatgcatgatgggaccactcctctgatc
ctggccgctcgcttggctgtggagggcatgctggacgatctcatcaactgccatgcagac
gtcaatgccgtggatgatctaggcaagtcagcactgcactgggcagctgctgtgaataat
gttgaagccgcagtagtcctcctgaagaatggtgccaataaggatatgcagaacaataag
gaggaaaccccactgttcctcgcagccagagaagggagctacgaaactgccaaggtcctg
ctggaccattttgccaaccgcgacatcacagaccacatggaccggctcccccgggacatc
gcccaggagcgcatgcaccacgacatcgtgaggctgctggacgagtacaacctggtgcgg
agcccaccgctgcacaacggcccgctgggggcacccacgctgtccccaccgctctgctct
cccaacagctacatcggcaacctgaaacctgccgtccagggcaagaaggccaggaaaccg
agtaccaagggcctgagctgcaacggcaaagatgccaaagacctcaaagcccgcaggaaa
aaatcgcaagatggaaaaggatgtctgcttgacaactccagcgtgttgtctccagtggac
tccctggagtcaccccacgggtacctgtcagatgtcgcctctcctccgctgatgacctcg
ccgtttcagcagtccccttccatgcctctgaatcatctgccaggcatgcctgatgcccac
atgagcatcaaccacctcaacatggcggggaagcaggatatggccatgggaaactccagc
aggatggccttcgattcggtgccgccgcgtctctctcacctccccgtctccagccccagc
acagtgatgagcaatgccccgatgaatttctctgtcggtggagcggccggtctgaacggg
cagtgtgactggctcaccaggctgcagaacggcatggtccagaaccagtacaacccgatg
agaggcaacatgcaaccaggagcgcatcagcagacgcaaaaccttcagcacggcatgatg
acctccctgcacaacggcttgcccaccacaagcttgtcgcagatgatgagctaccaagcc
atgcccaacacccggctggcttcccagcctcacctgatgcagagccagcagctccagcag
atgcagcagcagcagctccagcagcaaaacatgcagccacagcagcagccgcagcagcag
cagccgcagccgcagcagcagcagccgcagcagcatcacaaccccagctccaacgcgagc
ggccacatcggccaaaatttcctcggtacggagctgagccagcccgacatgcagccagtg
agcagcaataccatggcggtccacaccatcctgcctcaagattcccagatgctgcccacc
tctctgccatcctccctcgcccagcccatgaccaccacgcagtttctaactccaccttcc
cagcacagttactcctcccccttggacaacacccccagccaccagctccaggtgcccgac
caccctttcctaacaccgtctccggagtcgccggaccagtggtccagctcatctcctcac
tccaacgtgtccgactggtccgagggcatctccagccctcccaccagcatgcagtcacag
atgggacacatccccgaagccttcaagtaa
DBGET
integrated database retrieval system
