Rissa tridactyla (black-legged kittiwake): 128918320
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Entry
128918320 CDS
T09443
Symbol
PRDM16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00310
Lysine degradation
rtd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128918320 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128918320 (PRDM16)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128918320 (PRDM16)
Enzymes [BR:
rtd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
128918320 (PRDM16)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128918320 (PRDM16)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128918320 (PRDM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
PRDM2_PR
zf-C2H2_jaz
SET
zf-C2H2_6
zf-C2H2_11
zf-H2C2_5
Zap1_zf1
zf-BED
zf-met
Motif
Other DBs
NCBI-GeneID:
128918320
NCBI-ProteinID:
XP_054078366
LinkDB
All DBs
Position
16:complement(1264544..1598155)
Genome browser
AA seq
1167 aa
AA seq
DB search
MRSKARARKLPKSDSEIVNNMYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDF
TPKEGSPYEAPVYIPDDIPIPPDFELRESSIPGAGLGIWAKKKIEVGERFGPYMTVQRST
LKETNFGWEQILTDPEVTSQEGNIKKIADDLGNEKFCIDGSQSGAGNWLKYIRVACSCDE
QNLAVCHVNDQIYYKVIKEIEPGEELLVYLKEGGYSLGNMAPSMEEEHTFRCEDCDELFQ
SKLDLRRHKKYACTAVSSLYETLNDEIKQEGLGDGQVYECKDCERMFPNKYSLEQHMVIH
TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGA
RAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHYSPGGIFAPGLPLTPTSMMDKSKPSPNLNHASL
GFNDYFPSRPHPGGLPFSPAPPAFPALTPGFPGIFPPSLYPRPPLLPPTQLLKSPLNHTQ
DAKLPSPLGNPALPLISAVSNSNQAASGEEKCESSLENSYLEKLKARNSDMSDGSDFEDV
NTTTGTDLDTTTGTGSDLDSDAESDRDKTKDKGKQIESKPDFVSSSVSASSTNNTSEIPL
FYSQHSFFPPPEEHLLPTTGAANDSIKAIASIAEKYFGPGFMGMQEKKMGSLPYHSMFPF
QFLPNFPHSLYPFTERTLNHNLLVKAEPKSPRDLHKVGSTSSESPFDLTTKPKEIKPILP
PPKVLPAPSSGEEQPLDLSIGNRIRASQNGGREPRKNHIYGERKLMASEVLPKISQSQLP
QQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKL
ESFAAMKADTGTSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTR
HLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLK
KHEHENVPVSQHSGVITNHLGTSASSPNSESDNHALLDEKEDSYFSEIRNFIANSEMNQA
STLADKRPEIQDIDGNSQCHGLANEKTEDVDDEDEELEEEDDDSLTGKSQDETVSPTAEP
RGAFEDEEDEEPTSLTMSFDHTRRLMQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgcgggcgagaaaactgcccaaaagtgacagcgagattgtaaataat
atgtacgagaccgaccctgatctccttgctggcgaaagtgcagaggaggaaacagaggac
agtattatgtcccccattcctgtcggacctccatcaccctttcccaccagtgaggacttc
actcccaaggagggctcaccttatgaagctcccgtctacattcctgatgacattccaatc
ccaccagattttgaactcagagaatcttcgatcccaggggcagggctagggatttgggcc
aaaaagaagattgaagttggggaaagatttggaccctatatgacagtacaaaggagcaca
ttaaaggaaacaaactttggatgggagcaaatactgactgatcccgaggtgacgtcccaa
gagggcaatatcaaaaagattgctgatgacctgggaaatgagaagttctgcattgatggt
agccagagcggagctgggaactggctgaagtacatccgcgtggcctgttcctgcgatgaa
cagaatctcgccgtgtgtcacgttaacgaccagatctattataaagttattaaagaaatt
gagccaggagaagagctcttggtgtatttgaaggaaggtggttattcacttgggaacatg
gcgcccagcatggaagaagagcacacgtttcgctgcgaggactgcgatgaacttttccag
tcgaagctcgacctgcggcggcacaagaagtacgcctgcaccgccgtcagctccctctac
gagaccctgaatgacgagatcaagcaagaaggtcttggagatggccaggtctatgagtgc
aaagactgcgagaggatgttccccaataaatacagcctggagcagcacatggtgatccac
accgaggagagggagtacaagtgcgaccagtgtcccaaggctttcaactggaaatccaac
ctgattcggcaccaaatgtctcacgacagcgggaaacggtttgaatgtgaaaactgtgtt
aaggtgtttaccgaccccagcaacctccagcggcacatccgttcccagcacgtcggcgcg
cgggcccatgcctgcccggactgcggcaaaaccttcgccacctcctccggcctcaaacag
cacaagcacattcacagcactgtcaaacctttcatatgtgaggtctgtcacaaatcctac
acgcagttctccaacctctgccgtcacaagcggatgcacgcggactgtcgcacccagatc
aagtgcaaggactgcgggcagatgttcagcactacctcctctctcaacaagcaccgccgc
ttctgcgagggcaagaaccattacagcccgggcgggatctttgcccccggcctcccccta
acgcccacttccatgatggacaaatccaagccctctcccaacctcaatcacgccagcctg
ggatttaatgattattttccatcccgcccgcacccggggggtcttccattctcacccgcc
cccccagcgtttcctgccctcactccgggattcccagggattttcccaccgtctctgtac
cccaggccccccttgttaccacccacacaactgctcaaaagtcccctcaaccacactcaa
gacgcaaagcttccaagcccccttgggaacccagcactccctctgatctctgcagtgagc
aacagcaaccaggccgcgtcaggggaggagaagtgtgagagcagcctggaaaactcctac
ctggagaagctaaaagccaggaacagtgacatgtccgatggcagcgacttcgaggacgtc
aatacaaccacaggcacagatctggacaccactactggcaccggttctgacctggacagc
gatgcagagagtgacagggacaaaacaaaagataagggcaaacaaattgagagcaagcca
gattttgtcagcagctctgtgtctgcaagttccaccaacaacacgagtgagatccccctc
ttctattctcagcattccttctttcctccccccgaggagcacctgctgcctaccacgggg
gcagccaatgactctattaaagctatcgcctccatcgcggagaagtattttgggcctggc
tttatggggatgcaggagaaaaagatgggttcgctcccatatcattccatgttccctttt
cagttcctccccaatttcccccattcactctatccttttacggagcggaccctcaatcac
aacttgctggtcaaggcagaaccaaagtcacccagggacctccacaaagtaggcagcacc
agctcagagtcgcccttcgatctcaccacaaagccaaaagagattaagccaatcttgccg
ccacccaaggtcctgccagccccatcctcaggggaagaacagccactggatctgagcatt
ggcaaccgcatccgagccagtcagaacggaggaagagagccacggaagaaccacatttat
ggggaaaggaagctgatggcaagtgaagtcttacccaagatttcccagtctcagctgcct
cagcagccatccctgcattatgctaagccatcaccctttttcatggaccccatatacagc
agggtggagaagcggaaggtgacagatcctgtgggtgccctaaaggagaagtacctgcga
ccctccccgctgctttttcacccccagatgtcagccatagaaacaatgacagagaaactg
gagagttttgcagccatgaaggcggacactggcacttccctgcagccccttccacatcac
cccttcaacttccgatcgccgccgcccacgctctccgaccccatcctgcgcaagggcaag
gagcgatacacctgcaggtactgtggtaagatcttccctcgctcagcaaatctgacaagg
catctgcggacgcacactggagaacagccctacaggtgtaaatactgtgacaggtcattc
agcatttcctccaacctccagcggcacgttcgaaacatccataacaaggagaagccattc
aaatgtcacctgtgtaaccgatgctttgggcagcagaccaacttggaccgacatcttaag
aaacacgaacacgagaatgttccagtgagccagcactccggagtcattacaaaccacctt
gggaccagtgcctcttccccaaactcagaatccgacaaccatgcacttttagatgaaaaa
gaggattcgtatttctctgaaatcagaaattttattgcaaatagtgagatgaatcaagca
tcaactttagcagataaaaggccagaaatccaggatattgatggcaattcccagtgtcat
ggattagcaaatgagaaaacagaagatgtggatgatgaagatgaagaactggaagaggaa
gacgatgacagcctgacagggaagtcacaggatgaaacggtatcacccaccgcagagccc
cgaggagcatttgaggatgaggaagatgaagagcccacatctctcaccatgagctttgac
cacacccgaaggcttatgcaatga
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