Rana temporaria (common frog): 120913228
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Entry
120913228 CDS
T07929
Symbol
NOTCH4
Name
(RefSeq) neurogenic locus notch homolog protein 4
KO
K02599
Notch 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120913228 (NOTCH4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Ank_4
Ank_3
Notch
Ank_5
EGF_3
NODP
NOD
DL-JAG_EGF-like
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
120913228
NCBI-ProteinID:
XP_040178967
LinkDB
All DBs
Position
9:29316413..29462713
Genome browser
AA seq
2174 aa
AA seq
DB search
MGTQWIVLFLFPLPLCQALYCESSQDPCLNGGTCLKLPNGTYLCSCYSGFQGDRCQFLDP
PCSPHLCHNGGTCKRLSSSEYRCTCGPGWTGKHCELIDHCTTNRCMNKGKCVNKDLSPRG
GFECQCQRGYSGEACEKDVDECQEAGVCKNGGICRNTIGSFLCECPAMYDGINCEMRRGQ
CSLYSCLNAGTCHQRTPNLYQCACPPGYTGSECGENIDDCINHKCQNGGTCIDGLEKYTC
KCPPGLEGGLCSKDIDECHTPGICRNGGTCQNTYGGFNCVCVNGWNGDNCEHNIDDCATA
TCAEGSTCIDQVGAYFCVCPTGRIGLLCHMEDGCLKNQCHPEATCDTDPSSHRIFCRCQP
GYTGATCYEDLDECNLGPSPCEHHGQCVNTEGSFLCRCPLGYTGTRCETDQNECHSNPCL
NGASCLDLLGRFECECTPGFEGVFCEREVSKCLSSPCVNGGNCTDLLNDFHCSCHPGFQG
QRCETDVDECSSSPCHHSGVCVDHPGFFICECLSGFTGQLCEENIDECISQPCHNGATCQ
DQLNGFQCLCEPGITGATCDTNINECSSDPCNHGLCTDLVNSFQCLCDPGYSGTTCDTNI
NECNSDPCGYGHCIDLVNSFQCICDPGYSGATCDTNINECSSDPCIHGRCIDLVNSFQCF
CDPGYSGSHCETDISQCRSGPCQNGGTCQDLDDGFQCSCPPGTVLPQCTLENTTFINTTC
LHGSSQIQNNSSQCVCDVGWTGSSCDIPINECTTLHCENGGICHPHPDGYNCSCQAGFTG
LNCEIPVQLCSPETCLNGGTCHENPNITDPSCLCPAEWQGPQCEKDVDECSNDPCKNGAS
CVNIPGAYSCVCALGYTGHHCESALDHCLPDSCQNGGTCLSLHDMFTCICPSGYTGMLCE
EKVDSCASSPCQNGGSCKNLGDSYTCDCAKGYEGTECEVNIQDCTNSSCLNGGTCVDGIA
SYSCLCPERFTGRQCQDQITYCTIDSCKNGGTCHEVPGGYICSCPELYTGGACEDIIDFC
ARRPCQNKGICSQTGTQYRCQCAFGWVGNHCETPLLTCKATASRGVDPDTLCNRHGNCVD
SGTSYVCRCFPGYSGTHCLDKFDPCHPNPCKNGGRCRDISGSPSCQCLHGYYGATCEEKD
PCLSQPCNHNGVCVPKGNNYHCVCPSGTQGARCEINIDDCATAEVRCFHGGTCMDGVGGF
SCLCPLGYVGERCEGDVNECLFNPCDPRGTHTCVQLSNSFQCQCHPHYTGHRCEHIINYC
DNNPCANGGTCALAVNTTLGFTCSCPQDFSGPTCSEVILSCKTFTCHNGGKCIQGMEGLP
RCVCHRDYTGPQCQESVGSTSSPPQGPWKQCPEAECQRKFRNGVCDKPCNNKYCLYDGFD
CNITRSCKDDYERYCQDHFGNGHCETGCNNAECGWDGGDCTANHEKPGGRLILVLGYNSS
ILHRRDILTQLRALSIHLHTKIRLESDSNGDLLFRYRKGDRPEDLSAEQMERWKYETSKA
ETSKETVGCVLYVEVFNLECPLSTCLNSSQMAARFLEALNQKGEPNLPYSVLEVKSVDPP
IAPEESKLQYQWPLVGMAAGVAVAVIIGVFFGVQLSRKRQHGVLWLPSGFSRHRAQEGSR
RREPVGEDSIRLKPMKHDSVYDDSGPEEGIVPPKSRRLKLATDPSILDHRQWSQQHIDAG
VRFPQCIALTPPQEEPDGRDVDVRGPDGVTPLMSAICAGGGLEPIGGGVDPPEIENSASV
ISDLIGQGASLNAQTDSTGETALHLAARFSRQDAGKVMLDAGADTNVQDKLGRTPLHTAI
AADALGVFQTLLRCRQTDIDARMHDGSTPLILASRLPVLNMVEELVACGADIGATDKRGK
SALHWAAAVNNVPAMKTLLSHGANKDLQDKRDQTALFLAAREGSYEAVCLLLEHQVNREL
CDHVGHQPRHAARERGHRDIQRLLEECSQIVNRNTPAAPLVGAPQLKKTPRPRVKEPTKP
APLPHIDLSSSCYHNPPPVSAPPFLPGNQSESNCCQSHHAMANYGGNCPPYARSGSFSSG
VAGCQWGHRGWRVHFCPTGCTAPEASYTTGGQQMSPHAHWLPESQHPQSPNCQKPGPNFC
STPAAEPIPNKDLPCTPTDQLGHNIYLTPPSSQYGFPSPASPEETQSSQKTCMHHHPFLT
PSPESRNPWGIASP
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atgggcacccaatggatagttttattcctcttccccctgccgctgtgccaagctttatac
tgtgaaagttcccaggatccgtgccttaatggaggaacatgcctgaagctccctaacggt
acttacctttgcagctgctatagtggtttccagggtgaccgctgtcagtttttagaccct
ccatgttcaccgcatctttgccacaatggaggcacatgtaaacgattgtcatcctcagag
taccgctgtacatgtggccctggatggacaggcaaacactgtgaattaattgaccactgt
actaccaaccgatgcatgaataaaggcaaatgtgtcaacaaggatttgagcccccgtggg
gggtttgagtgccagtgccagcgtggctacagcggagaggcatgtgagaaggatgtggat
gaatgccaggaagctggtgtatgcaagaacggtgggatttgtaggaacaccataggatcc
ttcttgtgtgagtgcccagctatgtacgatggcatcaactgtgagatgagaagaggacag
tgctctttatacagctgcctcaatgcagggacgtgccatcaaagaacccccaacttatac
cagtgtgcatgcccaccaggctacactggatctgagtgtggggagaacattgatgactgc
attaaccacaaatgtcaaaatggaggaacttgcattgacggacttgaaaaatacacatgt
aaatgtcccccaggattggaaggaggactttgttccaaagacattgatgaatgccacact
ccaggcatatgtagaaatggcgggacttgtcagaacacgtatggaggattcaattgtgtg
tgcgttaacggatggaatggtgacaactgtgaacacaacattgacgactgtgccacagcc
acctgtgctgaggggtccacctgcatcgaccaggtgggggcgtatttctgcgtatgcccc
actggaaggattggtcttttgtgtcacatggaggatggatgtctgaaaaatcagtgtcac
ccagaggccacatgtgatacagatccctcatcccacaggatcttttgccgttgccagcca
ggctataccggagccacttgttatgaagatctggatgaatgcaatttaggtccctctccc
tgtgaacaccatggacagtgtgtaaacaccgaaggttccttcctgtgtcgttgccccctc
ggatataccggcacccgctgtgagacagaccagaatgagtgccactccaatccctgcctc
aacggagcctcgtgccttgacttgttgggtcggttcgagtgtgagtgcacgcccggattt
gaaggagttttctgtgaacgggaagtaagcaagtgtttaagctctccctgtgtaaacgga
ggaaactgcactgatctgttaaatgattttcactgttcctgtcatccgggttttcagggc
caaagatgtgaaaccgatgtggacgaatgttccagctcgccctgtcaccattctggggtc
tgtgtagaccaccctggtttctttatctgtgaatgcttaagtggattcacgggccagctg
tgtgaggaaaacattgatgagtgcatcagtcaaccatgccataatggtgctacctgccag
gaccaactcaatggcttccagtgtttgtgtgagcctggcatcacaggtgccacttgtgac
acaaatattaacgagtgcagcagtgacccctgcaatcacggactttgcactgacctggtg
aattcattccagtgtctttgtgatcccggctattcaggtaccacgtgtgacacaaatatt
aatgagtgcaatagtgacccctgcggttatggacattgcattgacctggtgaactcattc
caatgtatttgtgatcccggctattcaggtgccacatgtgacacgaatattaatgagtgc
agtagtgacccatgcattcacggacgttgcattgacctggtgaactcatttcagtgtttt
tgtgatcctgggtattcaggctcccattgtgaaacagacattagtcagtgcaggtccgga
ccatgccagaatggaggcacctgccaggatttggatgatggttttcagtgttcctgccca
ccaggaacagtccttccccagtgtaccttggagaataccaccttcatcaatacaacatgc
cttcatggcagcagtcagatacagaacaacagttctcagtgtgtctgtgatgtagggtgg
acagggtcatcttgtgatatccccattaatgagtgcaccactcttcattgtgagaacggg
ggaatatgccatcctcacccagatggatataactgctcatgccaagcaggattcacaggg
ttaaattgtgaaattcctgttcagctgtgttctcctgagacctgtcttaatggaggaact
tgtcatgagaaccccaacatcactgatccatcatgcctttgccccgcagaatggcaaggt
ccacaatgtgaaaaagatgttgatgaatgttccaatgatccctgcaagaacggggccagt
tgtgttaacatccccggagcatacagctgtgtttgtgccttggggtacaccggacatcac
tgtgaatctgcattagatcactgcctgccagatagttgccagaatggaggtacatgcctc
agtctgcatgacatgtttacctgcatttgtccctctggatacacaggaatgctgtgtgag
gagaaggtagacagctgtgcaagttcaccttgtcaaaatggcggatcgtgcaagaacctt
ggcgactcctatacctgtgactgtgccaaaggctacgaaggaaccgagtgtgaggtgaac
attcaagactgtaccaacagttcctgtctaaacggtggcacatgtgtggatggtattgcc
tcctactcctgcttgtgcccagaaagattcacaggaagacaatgccaagaccagatcact
tactgtaccatagattcgtgcaagaatgggggtacctgccatgaagttcctggtgggtac
atctgctcctgtcctgaattgtacacagggggcgcctgtgaggacatcatagacttctgt
gctcgcagaccgtgtcaaaataaaggaatatgttctcagacgggaacacaatatcgctgc
caatgtgcctttggatgggttggaaatcattgtgaaactcctcttctgacctgcaaggcc
acagcctccagaggagtggaccctgacacgctctgtaacagacacggaaactgcgtggat
tcagggacatcctatgtatgccgttgcttccccggttactctggcactcattgcctggat
aaattcgacccatgtcacccaaacccttgtaagaatggagggcgctgccgggacatttct
gggtcaccctcttgccagtgcctacatggatactacggggcaacctgtgaagagaaagat
ccatgtctgtcccagccttgtaaccacaatggggtgtgtgtgcccaaagggaacaactat
cattgtgtgtgcccatcgggaacccaaggagcccgctgtgaaattaatatagatgactgc
gccacagctgaagttcggtgcttccatggaggcacatgcatggatggagttgggggtttc
tcttgcctctgccccctagggtatgtgggagaacgctgtgaaggggatgtcaacgagtgt
ctgttcaacccctgtgacccacgagggacacatacctgtgtgcagctcagcaacagcttt
cagtgccagtgccatccacattacacaggtcatagatgtgagcacatcattaattactgt
gataataacccttgtgctaatggcggaacctgtgcattggctgttaacaccacactggga
ttcacctgcagctgcccacaggatttttcaggtcccacgtgtagtgaggtcatactgtct
tgcaaaaccttcacctgtcataacggtgggaagtgtatacaagggatggaagggcttcct
cgctgtgtttgccatcgtgattacactggcccccagtgtcaggagtctgtggggtccact
tcttctcctccgcaggggccctggaagcaatgccccgaagcagaatgccagagaaagttc
agaaatggagtctgcgacaaaccgtgcaataacaagtattgcttatatgatggctttgac
tgcaacatcacacgaagctgcaaggatgattatgaaaggtactgccaggaccactttggc
aatgggcactgcgaaacgggatgcaataacgcggaatgcggctgggatggaggagattgt
accgctaaccacgagaagcctggaggaagacttatcttggtgctgggttacaattcctcc
atactccatcgaagagacatcctcacacagctgcgcgctttgtccatccatctccacacc
aagatacgtctggaaagtgacagcaatggagacttgttgtttcgatatcgcaagggggac
agacctgaagacctgtctgcagagcagatggagagatggaagtatgagacctccaaggcc
gagaccagcaaagagactgttggctgtgtcctgtatgtggaagtttttaatctggagtgt
ccgctgtccacctgcctcaactcttcccagatggctgctcggtttttggaagctctaaat
cagaagggagagccaaatctgccatactcagtcctggaagtgaaatccgtggatccacct
atagccccagaggagtcaaagctccagtatcaatggccgttggtggggatggctgctggc
gtggcagtggctgtgattattggggtgttctttggggttcagctaagcagaaagagacag
catggggtcctgtggcttccttctggcttcagtcgccatcgggcacaagagggaagcagg
agacgggagcctgtaggagaagactctattcggcttaaaccaatgaaacatgattctgtt
tatgatgattcaggtcctgaagaaggaattgtgccaccaaaatccagaagacttaaactg
gcgacagacccctccatccttgaccatcggcagtggagtcaacagcatattgatgctggg
gttcgtttcccacaatgcattgctctgacaccgccccaggaggagcctgatggcagggac
gttgatgtgagaggtccagatggagtcactccacttatgtcggctatatgtgcgggagga
ggtttggaacccattggaggtggtgtagatccaccagaaattgaaaactctgcaagtgtc
atctcagatttgattggtcagggcgccagtctcaatgcccagactgactctactggagag
acagcgcttcacctggctgccagattctccagacaagatgctggcaaggtcatgctagac
gccggagcagatacaaacgtgcaggacaagctgggaaggacccctctccacacggctatc
gctgccgatgctctgggagttttccagaccctgttacgatgccgccagacagacattgac
gccagaatgcacgatggatccacaccactcatccttgcttctcgccttccggtactgaac
atggtggaagaattggtggcatgtggagcagacataggtgcaacagataagcgaggtaaa
tctgctctacactgggctgccgctgtgaacaatgtaccagcaatgaagactcttttgtct
catggggctaacaaggatcttcaggacaaaagggaccaaactgcactgttcctggccgct
agggaggggagttacgaagctgtctgccttctcctcgagcatcaagtaaatcgagagttg
tgtgatcatgtaggccatcagcctcgacatgcagcacgtgaacgcggacacagagatatc
caacgccttcttgaagaatgcagccaaatagtgaaccgcaacacacctgctgctcctctg
gttggagctccacagctgaaaaagactccgcggcctagagtcaaagagccaaccaagcct
gcccctttaccgcacatagacctgagcagctcctgttatcacaatcctcctcctgtttca
gcaccaccctttctgccagggaaccaatcagagagcaattgttgccaatctcatcacgct
atggccaactacggaggtaattgtccaccctatgctcgcagtggctccttctcatcaggg
gtagcaggatgccagtggggccatagaggatggagagttcatttttgtccaacaggatgt
accgcacctgaggcatcctacacaacaggaggacaacagatgtctcctcatgcccactgg
ttgccagaatctcagcatccacagtctccaaactgccaaaagccaggccccaacttctgt
tccactccagccgcagagccaataccaaacaaagacttgccctgcactcctactgaccag
ctggggcacaatatctacctgaccccaccttcatcacagtatggatttccatcccctgcc
agtcctgaagaaacacagtcttcacaaaaaacatgcatgcaccatcacccattccttact
ccttcaccagaatccaggaacccctggggaattgcatcaccataa
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