Rana temporaria (common frog): 120913994
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Entry
120913994 CDS
T07929
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04020
Calcium signaling pathway
rtem04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120913994 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120913994 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120913994 (GRIN1)
Ion channels [BR:
rtem04040
]
Ligand-gated channels
Glutamate (ionotropic)
120913994 (GRIN1)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
120913994
NCBI-ProteinID:
XP_040180317
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Position
9:122914199..123035656
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AA seq
941 aa
AA seq
DB search
MDRMRLFLLAVLFLFSFARAGCDPKIVNIGAVLSTKKHEVLFRDAVNQANKRHGTWKIQL
NATSVIHRQNAIQMALSVCEDLISSQVYAILVSPPPAPTDHMTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQALVWFEMMRIFAWNHVILIVSEDHEGRAAQKKL
ETLLEEKESKSKKRNYENLEQLSYDNKRGPKAEKVLHFEPGTKNVTALLTEAKGLEARVI
ILSASEDDASTVYKTAAVLDMTGSGYVWLVGEREISGSALRYAPDGVIGLQLINGKNESA
HISDAVAITAQAIHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIFNGSHILQNDRKIIWPGGETERPEGYKMSTNLK
IVTIHQEPFVYVKAALPDGTCKEEYGITGELIKKVQCQGPNETTPGRPTIPQCCYGFCID
LLLKLAKEMSFNYEFHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNTEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLNILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFR
SITSTLASSFKRRRSCKDTQYHPTDITGQLNLSDPSVSTVV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggacaggatgcgcctgttcttgctggcagtgctcttcttgttctcgtttgcccgggct
ggatgtgaccccaaaatcgtgaacatcggggcggtcctgagcaccaaaaaacacgaagtg
ctctttagggatgctgtcaaccaagccaacaagaggcatggcacctggaagatccaactc
aatgccacctctgtcatccacaggcaaaatgccatccagatggctctgtctgtctgcgag
gacctcatctccagccaggtttatgccatattggtcagtcccccaccagccccaacagat
cacatgactccaacgccagtctcttatacagctggattctatcgaataccggtcatcggg
ctaacgaccagaatgtcgatatattctgataagagcatccatctgtccttcctccgcact
gtcccaccatactcgcaccaggctctggtctggtttgagatgatgcgtatctttgcctgg
aatcacgtaattctcattgtgagtgaagaccacgagggccgggcagcccagaagaagtta
gagaccctcctagaagagaaagaatccaagagtaaaaaaaggaactatgaaaacctcgaa
caactttcctatgacaacaagcgtggacccaaggcagaaaaagttcttcattttgagcct
ggaaccaaaaatgtgactgctctactgactgaagcaaaaggcctagaagccagagtgatc
atcctctctgcaagtgaggatgacgccagtactgtgtacaagacagcagctgtgctagac
atgacaggctctggctatgtgtggttggttggagaaagggaaatttctggaagtgcctta
cgatatgcacctgatggggtcatcggtctgcagttgatcaatgggaaaaatgaatccgcc
cacataagtgatgcagtggccattaccgctcaggcaattcatgatctttttgaaaaagaa
aatattactgacccgccaagagggtgtgtaggaaatacaaacatctggaaaactgggccg
ctattcaaaagggtgctaatgtcctccaaatacccagaaggtgttacaggaagggtggaa
tttaatgaagatggagacagaaaatttgccaactacagcattatgaaccttcaaaaccga
aaactcgtccaagttgggatattcaatggaagccacattttacagaatgacagaaagatt
atttggccaggaggtgaaacagaaagacctgaagggtacaaaatgtcgaccaatctaaag
atagtgactattcaccaagaaccgtttgtttatgtcaaagcagcattaccagatggtacc
tgtaaagaggaatatggtataactggtgagctcatcaaaaaagttcaatgccaagggccc
aatgagaccaccccaggtcgtcccaccattccccagtgctgttatggcttctgcattgac
ttgttgctgaaactcgccaaagaaatgagtttcaactatgaattccacctggtggctgat
gggaagtttggtacacaggagcgggttaataacagcaataagaaggaatggaatggaatg
atgggagagctactgagcggacaagcggacatgatcgtcgcacctctgaccatcaacaat
gaaagagctcagtatattgaattctcaaagccatttaaatatcaggggctcaccatcctt
gtgaaaaaggaaatacctagaagcaccttggattcattcatgcaaccgttccagagcacc
ctttggctcttggtgggtctctctgtccatgtggtggcggtaatgttgtatctactggac
aggttcagtccttttggccggtttaaagtgaacacagaggaagaagaggaggatgcgctg
acgctctcttctgccatgtggttctcctggggtgtccttctgaactctggtattggagaa
ggagcgccaaggagtttttccgctaggatccttggcatggtttgggccggatttgctatg
atcattgtagcttcctacactgccaacctggctgccttcctggtgttggacaggcctgag
gagaggataacaggaatcaatgaccccaggctgcgaaatcccagtgacaagtttatttac
gccacagtcaagcagagttctgtggacatctacttcaggaggcaggtggagctgagcacc
atgtaccggcacatggagaaacacaactatgagagtgccgctgaggccattcaggcggtg
cgagataataaacttcatgccttcatctgggactcggcagtgctggaatttgaggcctct
cagaagtgtgacttggtcaccacaggagaattatttttccgttctgggtttggcattggt
atgcggaaggacagtccgtggaaacaaaatgtgtcactgaacattctcaaatctcatgag
aatggtttcatggaagatcttgataagacctgggttagatatcaggaatgcgattctcgc
agcaatgccccagctacgcttacgtttgagaatatggcaggtgtcttcatgctagtggct
ggtggtattgttgctggaatcttcctgatatttattgagattgcatacaagcggcacaaa
gatgcccgcaggaaacagatgcaactggcctttgccgccgttaatgtgtggaggaaaaac
ctgcaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagcctcttttagg
tccatcacctccaccctggcctccagcttcaagagacgtaggtcctgcaaagacacgcaa
taccatcccactgacatcactggtcagcttaatctatccgacccttctgttagcactgtg
gtgtaa
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