Rana temporaria (common frog): 120919514
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Entry
120919514 CDS
T07929
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04020
Calcium signaling pathway
rtem04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120919514 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120919514 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120919514 (GRIN2C)
Ion channels [BR:
rtem04040
]
Ligand-gated channels
Glutamate (ionotropic)
120919514 (GRIN2C)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
120919514
NCBI-ProteinID:
XP_040187649
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Position
12:62651815..62939831
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AA seq
1203 aa
AA seq
DB search
MFLAYSVGCLFLGALGCGAVVMETLLPQAGGHVVNVPLVFGGSFSQMELMGPLLPEGSLN
LPLDIHTVSVFVNDSGPGPLLRQLCLALKGAHAMVFQDNVGTEAVAQILDFVSSQTLVPI
ISISGGSAVVLKPKEPSSSFLQMAASVEQQLTVIFKVLEEYDLGPFSVVTSHYPGHQIFL
KTVRTLCEAIQPGWGPQDELILEPGTGPRGIQHVLKQVSAPVFLLFCSREEAEELFFVAG
EAGLLGPAHIWIVPSFTIGSPEQPANFFPVGLVSVMTDGWRRSLQQKVQDGIAVISAAAK
NYIQKHGELPTPGGTCFAPMQIQGNDTLYRHMLNIVWQERDLSFTTQGFLRDPSMLVITL
TPQRVWEEVGRWDHGIIRMKYPVWPRYGTGQQPVTDTRHLTVATLEERPFVIVESTDPVT
GDCVRNTVPCRKQSNLTLSSSGEPYSKLCCKGFCIDILKKLARTVKFSYDLYLVTNGKHG
KLVRGVWNGMIGEVYYQRAHIAIGSLTINEERSEIVDFSVPFVETGISVLVSRSNGTVSP
SAFLEPYSPAVWMMMFVMCLSVVAVTVFIFEYFSPMGYDQNINNGKRLGGPSFTVGKSLW
LLWALVFNNSVPIQNPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS
DRKFQKPQEHYPPFRFGTVPNGSTERNIRANYPDMHSYMVRYNQRSVEDALASLKAGKLD
AFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKNSRWKRPIDLALLQFLGDG
ETQRLETVWLSGICQNEKNEAVSSKLDIDNMAGVFYMLLVAMGLSLLVFSWEHLVYWRMR
HCVPRPCVEQSLLGISRGIYSCFRGVQSPSHGPACPEPDVTGTPVPVNVLRVLQTAKDLV
SSSAVGGSLETASHALRTWRQRSESLQAVFSVQGTQQQLQANSSPHYAVTSKPIVTVAPS
KNISLVSPTLRSTQVTCSPREETDLKPTIINTCLSPDTMPPMAITTLNESVRRTEPGAAS
GNCETSQLSACKRWELLERVPATSTTAVPHCSSWCHSPIPSQPRRHILLCDSFNKKDWRL
HQHCGCPSYCSLPHSNQVCFLCSNSPPFEQKGRKWLSPVHCKPSQQEACFAGPISTCAKP
ATLSHRDHHNAYSIASVGRTVCHSKTRSRRKPTPFPLGTFPTERSRTHHPTETWKRISRE
SEV
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgttcctggcttattccgtgggttgtctttttcttggcgcactagggtgtggtgctgta
gtaatggaaacgctgctacctcaagctggaggacatgtggtgaatgtgcctctagtgttt
ggaggttcgttttctcagatggaactgatgggacctcttcttccagaaggatctttaaat
cttcctctcgacattcatactgtttcggtgtttgtcaacgacagtggcccaggaccgctt
ctgcgccagctgtgcctggcactaaaaggggcccatgcgatggtgtttcaggataacgtc
ggaacagaggctgtggcccagattctggactttgtatcttcacagactcttgtacctatt
atcagcataagtggaggatcagctgtcgttttaaaaccaaaggagcccagctcttccttc
ctgcagatggcagcctcggtggagcagcagcttacggtcattttcaaggtgcttgaagaa
tatgacctgggtccattctctgtggtaaccagtcattaccccggacaccaaattttcctg
aaaacagtgagaactctgtgtgaggctattcagccaggttggggcccccaggatgagcta
atattagaaccaggcactggtccacgtggaatccaacatgttcttaaacaagtatctgct
ccagtgtttctactgttctgctctagagaggaagctgaggagttattttttgtggctggt
gaagctgggctccttggacctgcccatatatggattgtaccaagcttcacaattggttct
ccagagcagcctgctaatttcttccctgttggattagttagcgttatgactgatggctgg
aggcggagcttacagcaaaaggtacaggatggcatagcagtaatttccgcagcagctaag
aactatattcagaaacatggtgaattgcccactcctggaggaacctgctttgccccaatg
caaatccaaggaaatgacaccttgtataggcatatgctcaatatagtttggcaggagaga
gacctgtccttcactactcaaggatttctacgagatccttccatgttagttattacattg
actcctcaacgagtgtgggaggaggttggcaggtgggatcatggtataattcgaatgaag
taccctgtatggccacgttatggtactggccaacagcctgtgactgatactcgtcatcta
actgtagccaccttagaagagaggccgtttgttattgttgagagcacagacccagtaaca
ggagactgtgtgcggaacactgtgccttgtcgcaagcagagcaacctgactttgagcagt
tcgggagaaccctattccaagctgtgctgtaaaggattctgtattgacatcttgaagaag
ttggctagaactgttaagttctcatatgatctttatctggtgaccaatggcaagcatggg
aagcttgtacggggggtgtggaatggcatgattggagaggtatattaccagcgtgctcat
atagctatcggatcactcactataaatgaggagcgttcagagattgtggatttttcagtt
ccctttgtagaaaccggaatcagtgtcctggtatcacgaagcaatggaactgtgtctccc
tcagccttcttggagccatacagtcctgccgtctggatgatgatgtttgtcatgtgtctg
tctgttgttgctgtgactgtcttcatcttcgagtatttcagccccatgggatacgaccaa
aacatcaacaatggaaaacgtttaggaggcccaagctttacagtgggcaaatctttgtgg
ctcctctgggcactggtgtttaataactccgttcccatacagaatcctcgtggtactaca
agcaagattatggtgctagtctgggccttcttcgctgtcatcttcttggccagttacaca
gccaaccttgctgcattcatgattcaagagcaatacatagacacagtgtctggcctaagt
gaccgaaagttccagaaacctcaagagcattatccgccattccgatttggaacggtccca
aatgggagcacagagcgtaatatccgtgccaactatcccgacatgcatagttatatggtg
cgctacaatcagcgatcagtggaggatgctcttgctagcttaaaggctggaaagttggat
gcctttatctacgatgccgcagtgctgaattacatggcaggaaaggacgaaggctgtaaa
ctggtaaccattggaagtggcaaagtctttgctacaacaggctatggtattgctctgcag
aagaactcacgttggaagcgtcccattgatcttgcactgctgcagtttctaggagatggt
gaaactcagagactggagacagtgtggttatctgggatatgtcagaatgagaagaatgaa
gctgtaagcagtaaactggacattgataacatggctggagtcttctacatgctgttggtt
gctatgggtttaagcctgttggtcttctcatgggaacaccttgtgtactggaggatgaga
cactgtgtacccagaccttgtgtggagcagagcctgcttggaatcagtcggggtatatat
agttgttttcgaggtgttcagagtccatctcatggccccgcttgtcctgagcctgatgta
acaggaactccggtacccgtcaatgttttaagggttctgcagacagccaaggatcttgtt
tcctcctctgctgttggtgggtccctggagactgcatcacatgcactacgtacttggaga
caaagaagtgaaagtttgcaagctgtcttctctgtgcaaggtacacaacaacaattacag
gccaattcatcccctcattatgctgtcacttcaaaaccgatagtaactgtagccccatct
aagaatatatcacttgtttctcctactctccgatcaacccaagtcacatgctctccaaga
gaagaaacagatctcaagcccacaattataaatacttgtcttagtccagatactatgcca
ccaatggctatcactacccttaatgaaagtgttcggagaacagagcctggtgctgcaagt
ggaaactgtgaaacatcccagctttcagcatgcaagagatgggaactattggaaagagtg
cccgctacatccacaacagcagttcctcactgtagttcttggtgtcattcccctatcccc
agccaaccaagacgacatatcttgctatgtgattcatttaacaaaaaggactggagatta
caccaacattgtgggtgcccatcgtactgttccctccctcatagcaatcaagtctgcttt
ttatgcagcaatagtcctccttttgaacaaaaagggagaaaatggcttagcccagttcac
tgtaaaccctcccaacaggaagcatgctttgctggcccaatctctacatgtgccaagcca
gccacgctaagccacagagaccatcataatgcttacagcatagcatctgtagggaggact
gtttgtcacagcaagacaagaagtagaaggaagcctaccccttttcctttagggacattt
ccaactgaaagatcaagaacacaccacccaactgaaacatggaagagaattagcagggaa
tcagaagtgtaa
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integrated database retrieval system
