Rana temporaria (common frog): 120927941
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Entry
120927941 CDS
T07929
Symbol
HLCS
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00780
Biotin metabolism
rtem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
120927941 (HLCS)
Enzymes [BR:
rtem01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
120927941 (HLCS)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
120927941 (HLCS)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
120927941 (HLCS)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
120927941 (HLCS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
120927941
NCBI-ProteinID:
XP_040194891
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Position
2:complement(509246456..509515451)
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AA seq
878 aa
AA seq
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MLITLCYVYLWLRCRSSHALLIRSCVRQFYKTSSFTFCTHPREKEKTISSGAQGSSEDKF
CLHLGNKAFFIDSAQCFEDLNKWNLLLGSPSDRDLEARQIAFITESVPLPGETLSATSHA
NKKVRNLSEYCLPLALCHGDSSRLLAEASVDNFSELGIAFMEDRLQMDNGSQPQKITSVH
LRESATTEGEDPHNPHLYLTQRKAALEPNLISDRTFGKDMGVAESTEMENPDNSNGNPNS
NRRTRLGQGEEASGEHLHLHLSSCHECLELENCTIESVKFASAENIPELPDDYISLEDHS
DVGHSNETSNLNVTGKPPNVLVYSSPSFPEQFEQVKSVLLQCFDTCRYVVYPLPEEQALT
APWMDNCLLLVLAGEELIPSNLHRLFTSYLEKGGKILGLASSYTFGNVALKRKSELLGSV
QDLVFDGPNDNLISLNILASGFAYEEGLVESCDKVDKWGRLNNESQDLMMVRQAYGDNGG
EAVLCQVRLEVAPESLMEHDKGTFDSLKLSNPQRHEVLTQILISLGLECEVSPSPSLTPV
YLLSAQKDKYPDVLQWIQSKTKNGLIKCSKMSLKVFESPQYDIDITPSLAPLITTEEDFI
CENFSLEKYRENLRTETLGKIVMFSEVTTTTFNLLDGLMFHEQKEMGLIAIAAQQTQGKG
RGGNVWLSPKGCALMTLLVSIPMSSPLGQRIGFIQHLMALAVVEAVRSLPGCEDIELKVK
WPNDIYYSNMMKLGGVLVNSTLMGNTFHILIGCGFNVSNSNPTICINDLISEHNKRYKTN
IEPLRVDTLIARSVTALEALINTFQLIGPSGVLPMYYKYWVHSGQQVRLGGEDGPLAWIV
GLDDSGFLQVLQEGKEVITVHPDGNSFDMIRNLIVPKR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgctcattaccctctgctacgtatacttgtggctgcgctgccggtcctcccatgctttg
ctgatcaggagctgcgtgcgccagttctataagaccagctccttcacgttttgcacccat
ccccgggaaaaggagaaaacaatcagtagtggcgcgcagggttccagcgaggataagttc
tgcctgcatttgggcaacaaagccttcttcattgacagtgcccagtgctttgaagatctg
aacaagtggaacttgctactaggatctcccagtgatagagatctagaagccaggcaaatt
gcctttattactgagagtgtcccattacctggcgaaaccttatcagctacatcacacgct
aacaaaaaggttcggaatctctctgagtattgtctccctctggctctgtgccatggagac
tcttctaggttactggcagaagccagcgtggacaacttcagcgagcttggcatagcgttc
atggaagatcgcttacagatggacaatggctctcagccgcagaagattacatctgtgcac
ttaagagagagcgctacgactgaaggagaagacccccacaaccctcatttatatttgact
cagaggaaagctgcccttgagccaaatcttatttctgatcggacttttggaaaggacatg
ggtgtggctgaaagcactgagatggagaaccctgacaacagcaatggaaaccccaattca
aataggagaacacgcctgggacagggagaggaagctagtggtgaacatcttcatcttcac
ctgtccagctgccatgagtgccttgaactggagaactgcaccatagagtcggtcaaattt
gcttcagcagaaaacattccggaacttcctgatgattacatcagcttggaggatcattct
gatgtgggtcattccaatgagacctcaaatcttaatgtcactgggaagccacctaatgtt
ctcgtctatagtagcccttcatttccggaacagtttgaacaagtcaaatcagtgctcctc
caatgctttgatacctgtcgatacgttgtgtaccctctccctgaggagcaggctctcaca
gccccatggatggacaattgcttactgttggttctagcgggtgaggaactcataccttcc
aatcttcatagactctttacttcctatctggagaaaggtgggaagatccttgggttagcc
tcctcttatacgtttggtaatgtagctctgaaaagaaaatctgaacttctgggctcagtt
caagacctggtttttgatggacccaatgacaatctgattagtctcaatatcctggccagt
gggtttgcgtatgaggagggcttggtagagtcatgtgataaggtggataaatggggacga
ttaaacaatgaaagtcaggacctgatgatggtgcgtcaagcgtatggtgacaacggtgga
gaagctgtcctatgccaggtcaggctggaagtggctcccgagtctctaatggaacatgat
aaggggacctttgactccttgaagctcagtaacccccagaggcatgaagttctgacgcag
atcctcatcagtcttggtctggagtgtgaggtcagcccctccccgtccctcacacctgtc
tacctgctaagtgcacagaaggataaataccctgatgttctccagtggattcaatcaaag
acaaagaatggattgatcaaatgcagcaagatgtctctgaaggtgtttgagtctccccag
tatgacatagatatcactccatctctggcgcccctgataacaacagaggaagacttcatc
tgtgagaacttcagcctggagaagtacagggagaacctccgtactgaaacactcgggaaa
attgtgatgttttctgaggtcaccaccaccacatttaaccttctggatgggctgatgttt
cacgaacagaaggaaatggggttaatcgctatcgcggcccagcagactcaaggcaaaggt
cgcggtggaaacgtctggcttagccccaaaggttgtgctttgatgacactccttgtgtcc
atcccaatgtcatcacctctgggacagagaattggcttcatacaacaccttatggcattg
gccgtggtggaagctgtgaggtctttgcctggatgcgaggatattgaattaaaagtgaaa
tggccaaacgatatttactacagtaacatgatgaagctgggaggagtcttggtcaactca
acactcatggggaatacctttcatattctcattggctgtgggttcaacgtcagtaatagc
aacccgacaatctgtatcaacgatctcatctcagaacacaacaagcgctataaaacaaat
attgaacctctaagggtggatacgctgatagctcggtccgtgacggctctggaggccctc
attaatacatttcaattgattggacccagtggcgtcttgcctatgtactacaaatactgg
gtacacagcgggcagcaagtccgacttggtggtgaagatggtccgttggcttggattgtt
ggtttagacgactctggtttcctccaagtccttcaagaaggaaaagaagtcattactgtc
catccggatggaaactctttcgacatgataagaaacttgattgtaccaaaacgttaa
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