Rana temporaria (common frog): 120929246
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Entry
120929246 CDS
T07929
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03410
Base excision repair
rtem04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120929246 (PARP4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120929246 (PARP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtem03032
]
120929246 (PARP4)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120929246 (PARP4)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120929246 (PARP4)
Enzymes [BR:
rtem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120929246 (PARP4)
DNA replication proteins [BR:
rtem03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120929246 (PARP4)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120929246 (PARP4)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120929246 (PARP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VIT_2
BRCT
VWA
VWA_3
BRCT_2
PTCB-BRCT
PARP_reg
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
120929246
NCBI-ProteinID:
XP_040196485
LinkDB
All DBs
Position
2:complement(94704489..95085491)
Genome browser
AA seq
1288 aa
AA seq
DB search
MGVGIFSECVFFLKINTFPSKEKTNLKTSITSNGGAISIAINEKCTHVVAVSNAALNSSQ
QKNIQKHCIPVVKPDFIWRSIQENRLVEVGLCDNKALEVKQDQVKDDKKGRFLAKFMKQS
TSDTGERDFIDAEEFEEEGDEKELPFDTVVAKYSFFQKGEEMAIVEILCFSEQCPFPFKV
STVCGIPGTSQKEFSFNLFSSSEKACNKYEQRTNDLKNKGFTQIIKIEPEAELMASQPLQ
KVLLGEALNVTQLSPEVGGFVESIWTYAQGHLTSVVSCPVENISLNDVSKAEGILQNVRN
ALNKNEDIREFLDEFYQCIPHWQRQQGNVDKKFLTAKQDLCQLIRDMVNISETNSKPHPS
PVGKYRALKCRVEYVDPNTEEFHRVKQEVLNNNHSNEEFQILRVFRVGRLTEASNFRSDL
GNVKSLLHASSLRNIVGILSRGLLLPKIIVDEFGLDRTDIGNLGSGIYFSDSISTSVKYT
EASKFSGERLLLVCDVALGRTKDVGKRDYSINEPPEGFHSLHGVRSDLLKNSQFIDDEFV
VYNVNQVKIRYVVQFCTSKDTPNLSSELAVTLLENENEQMATCEPTEDDPVEDLPEATVP
KGGLQSKDGQQIPLESIHVKARLKDLAAQVIIFQTYKNNSLFPIEAKYVFPLDETAAVCG
FEAFINGKHIVGEVKEKQEAHREYRTAISQGHGAYLMDQDAPDVFTVSVGNLPAMATVII
KVTYITELKCSYSSVSFSIPGTVASWQEDQALKENTQDTVATVGIEGDKAAQGNFCLDMS
IEMPRKIEDICSYTHSIKKKQTECKAVIQVEEGSTLTDGGFCLNIGMEDLYIPRMWIETH
PDQDSEACLLIFQPEFEDWYEEPKFTIFLDCSNSMESCFRSAKQVALLALNTVYSSAINI
IVFGSTYKEFYLYPKRAENSEMEKFIKMAKPNMGSTELWKPLQSTCLLRPTSGTHKILLI
SDGHLQNENLAFQILKKNKNHIKLFTCGVGAKANKHMLRRLAKDGAGAFEFFADTSKSSW
RSQMQKQDLKLKSAACTAISVKWRLFGTNPTEPMQAPASIQSLYHDDILFVYGFVPHCTQ
ATLKALINNKEYENIVSTTELQKTTGTILHKLTARAFIRDYEDGILHEQEHENEMEKQKM
KSFIINLSKEHSIVTQFTSFVAVEKRSAEESENVEPNILEILSAEDMDILPYIAYEDKEE
SNIHGLDYRLEARICRQSEGSSMTSDEDKLDRSIMMPDTDEEESRMTLDEESSEECCMTE
LYDACSSLPLAGADFTSTSSTGDRGGST
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaggcatcttttcagagtgtgttttcttcctcaaaatcaacacttttccatcc
aaagaaaagacaaacctcaagaccagcataacttccaatggaggagctatttctattgct
atcaatgaaaagtgtacacatgttgttgcagtaagtaatgcagctctgaatagttcccag
cagaagaatattcagaagcattgtataccggtagtgaagcctgattttatttggagatcg
atccaggagaatcgacttgttgaggttggattgtgtgacaataaagcattagaggtgaag
caggaccaagttaaagatgataaaaaaggtagatttcttgccaaatttatgaaacagtct
acaagtgatactggtgaaagggatttcatagatgctgaagagtttgaagaggaaggagat
gaaaaagagcttccatttgatacagttgttgcaaaatacagctttttccaaaaaggtgaa
gagatggccattgtggaaatactctgttttagtgaacagtgtccctttccatttaaagta
tctacagtgtgtggaataccaggaacatcgcagaaagagtttagttttaacttatttagt
tctagtgagaaggcttgcaataaatatgaacagcgaactaatgacctgaaaaacaaagga
ttcacacagattattaaaattgaacctgaagctgagttaatggcttcccaacctctgcaa
aaggtgctgctgggagaagccttgaatgttacacagctgtccccagaagtcggtggcttt
gtggaatccatctggacatatgctcaaggacatcttacatctgtagtgtcttgtccagta
gaaaatatcagcctcaatgatgtgagtaaagctgaaggaattctacaaaatgtgcgcaat
gcactgaataagaatgaagatattagagaatttctggatgagttttaccaatgtattccc
cactggcaaagacagcaaggaaatgttgacaagaagtttttgacagcaaaacaagacttg
tgccagcttataagagacatggttaacattagtgagacaaactcaaaacctcacccaagc
cctgttggaaagtaccgggcactcaagtgccgagtggaatatgttgatccaaacacagag
gagtttcatcgggtcaaacaagaggttttgaataataatcacagcaatgaagagtttcag
attttgcgtgttttccgtgttggaagattaacagaagccagtaattttaggagtgatctg
ggcaatgtcaagtctttgctccacgcctcatcactacgcaacattgttgggattctgtcc
cgtggattgttgttgcccaaaataattgttgatgaatttggcttggacaggactgacatt
ggaaaccttggcagtggcatttatttcagcgactcgataagcacaagtgtaaaatataca
gaggcatctaaattcagtggagagcgcctcttattggtttgtgatgtggctttaggtaga
acaaaagatgtcggtaagagagattacagtatcaatgaaccacctgaaggcttccacagt
ttacatggggtccgaagcgatttgttgaagaattctcagtttattgatgatgaatttgtg
gtgtataatgtaaatcaggtgaagattagatatgttgttcagttttgcactagcaaagac
acacctaatttgagcagtgaacttgcagtaactttactggagaatgagaatgagcagatg
gcaacttgtgagcccacagaagatgatccagtagaggatcttcctgaagccacggtccca
aaaggtggtcttcagagcaaggatgggcagcagataccgctagagagcattcatgtcaaa
gctcgattaaaggaccttgccgctcaggttatcattttccagacctacaagaataattcc
ctctttccaattgaagctaaatatgtttttcctctcgacgaaactgcagctgtgtgtggg
tttgaagcatttatcaatggaaaacacattgttggagaggttaaggaaaagcaggaggca
catcgggagtacagaacagctatcagccagggtcatggcgcttatctcatggaccaagat
gcacctgatgtcttcacagtgagtgttggaaatctgcccgccatggcaactgtcatcatt
aaagtcacctatataacggaactgaaatgttcatattctagtgtgtccttctctattcct
ggaactgtggcttcttggcaagaagatcaagcactgaaagaaaatacccaggataccgta
gcaacagtgggaattgagggcgacaaggcagcgcaaggcaatttttgccttgacatgtca
attgagatgcctcggaaaattgaagatatatgctcttatacacacagcataaaaaaaaaa
caaacagagtgcaaagctgtgatccaagtggaagaaggcagtaccctgactgatggaggc
ttttgtttaaacataggaatggaagatctttatatcccaagaatgtggattgagacccac
ccagaccaagacagtgaggcatgcttgctgatatttcagcctgagtttgaagactggtac
gaagagccaaaatttaccatctttcttgattgttcaaattccatggaatcctgttttcgg
agtgctaagcaagttgctctgcttgccctcaatactgtatattccagtgctatcaacatt
attgtttttggatcaacttacaaagaattttatctctacccaaagcgagctgaaaactca
gaaatggaaaagttcattaaaatggccaaacccaacatgggaagtacagagttgtggaag
cctctacagtccacctgtcttttgagacccacatctggaactcataaaatcctcctcatc
tctgatggtcacctccaaaatgaaaaccttgccttccagatcctaaagaaaaataaaaat
catattaaattgttcacttgtggtgtaggggcaaaagcaaataaacatatgctgaggcgt
ttggcaaaagatggtgctggagcatttgaattttttgcagacacatctaagagcagctgg
agaagccagatgcagaaacaagatttaaagctcaaatcggctgcatgtacagccatatct
gtcaagtggaggctgtttggtacaaatcccactgaaccgatgcaagcccccgccagcatt
cagtctttatatcatgatgacattctctttgtttatggatttgtccctcattgcactcag
gccacgctgaaggctttaatcaacaataaagaatatgagaacatcgtttcaaccactgaa
ctacagaagaccactggaacaatacttcacaagctcacagctcgggctttcattcgagac
tatgaagatggcattctccatgagcaagaacatgaaaatgagatggagaaacagaagatg
aaatctttcattattaaccttagcaaagagcactcaattgtgactcaattcacaagcttc
gttgctgtagaaaaacggagtgctgaggaaagtgagaatgtagaaccaaacattcttgaa
atcctatctgctgaagacatggatatattgccatatatcgcttatgaagataaagaggag
agcaacattcatggacttgattatcgattggaggcacgcatctgtaggcaatcagaggga
tcaagcatgacgtcagatgaggacaagttagatagatcaattatgatgcctgacaccgac
gaagaagaatcaagaatgactttagatgaagaaagctcagaggaatgttgcatgacagaa
ttatatgatgcgtgttcatctctccctctggcaggtgctgattttaccagtaccagttcc
acaggagatagaggaggttcaacgtag
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integrated database retrieval system
