Rana temporaria (common frog): 120929264
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Entry
120929264 CDS
T07929
Symbol
ATM
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03440
Homologous recombination
rtem04068
FoxO signaling pathway
rtem04110
Cell cycle
rtem04115
p53 signaling pathway
rtem04210
Apoptosis
rtem04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120929264 (ATM)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
120929264 (ATM)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120929264 (ATM)
04210 Apoptosis
120929264 (ATM)
04115 p53 signaling pathway
120929264 (ATM)
04218 Cellular senescence
120929264 (ATM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtem01001
]
120929264 (ATM)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rtem03032
]
120929264 (ATM)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120929264 (ATM)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120929264 (ATM)
Enzymes [BR:
rtem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120929264 (ATM)
Protein kinases [BR:
rtem01001
]
Serine/threonine kinases: Other
PIKK family [OT]
120929264 (ATM)
DNA replication proteins [BR:
rtem03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120929264 (ATM)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
120929264 (ATM)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
Check point factors
Other check point factors
120929264 (ATM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT
Motif
Other DBs
NCBI-GeneID:
120929264
NCBI-ProteinID:
XP_040196511
LinkDB
All DBs
Position
2:complement(98910295..99124032)
Genome browser
AA seq
3060 aa
AA seq
DB search
MSLALHELLLCCRQLETDKATERRKEIDKFKRLLRDKETIQQLDRNSDHRQTKQLNWDTV
FRFLQKYIYKEIEGLKSAKANVSQSTHAARQKKMQDISSLVKYFIRCANKRAPRLKCTEL
LLHVSDTIKDPTTCAAYGADYSSILLKDILTVRKYWCEITAKQWEELLHIYCNLYLKPNS
AINRLPVARIIHTLTRGCCLQFEGLHSKLFSFFSNVMTRAREERNLPGLDQILAALNVFL
STTCVNCRMRVCKLGEEIFPTVVKLWSPHGPKDTLKDEIVEFFRLMLHIHHPKGAKTTEE
GAYAFETERWQRNVYNLYDAMVNEISQIGSRGKYSSGSRNIAVKENLVELMADICHQLFT
ENTRILEITQASFAVTQRDPSASMVPSKRRRIELGWEVVREKLQPSENDFDVIPWLQIVA
CLIARHPDSLPSMEMTPLLTILHQLLVQQRRGERATFVLRSLKEVAVCQMQKNDVIMTPK
SDLHKLWTKIWAVTIRSISSPQTEPESFALLGVMLQGGLVSADRDFWKIFSGSAGKPSSS
AMHCLSVALALTSCAVPDYLSSGLEQHVHEISGVKRQLKEEIITWLLFGSQDDEMDDASE
HAPCINKYFHHPAFHSVLVSLTMKDSNAAMSYFGNPVDCLHHKRGKDSRFSETEELYLLS
SFNEMVTISNAAAVETRGQSSSSCLTVHHCLKQKLESDLLSLSEQLLNSYSSETTPPDSL
AQCASLLIGVLACYCHAEVINEEQACKSTLFQKAKMLMQYAGETTALLKGKLNEEAKITS
LGMIVSHCLGCVCNCTKSRPAHCFSDLFLRLFTSRMLNDLCDISRNLIASSSSTVEAMEI
DIMDGDIETRMDTEDQGAVDLIDDHSSPEATESADFGEFQNVTGAVSPLSEDHPSKQEMV
LMQALQFLCFCASAAVNRSVNFRPSDIRRKLLNLIDTSLDTSKPLHLRVYLQLLNDLPVK
DVPLPMDDIIMLLKPVPDVCLSYRRDQEVCAAILKSLLPVVQCLGQDQDETDEKCDAEGQ
LLSVIQGFWHLTKEGKHTALVRLALVNCLRTFIEVDPQGKWAILNVGGADISVQDAFSQF
LADAHHQVRLLAAQSTNRLFQDTRSQALPLKLQKAAFKNVYMKVQEGMSYLSRSNQDPEE
LPDEKYNRNSTLLMLVSVILLSSPVCEKQALFAICQSVKENGLDPALIKKVLEKVSFTLG
YRSLKDFMTSHLDYLILEWLRMKGPGYNLSTFPYTLLQYTTLKDFYRSCYKMLIPHLVIR
SDFEEVKSIAQCIEEDWKVLLAACFPRILVNILPYFVSDCSGDSDRKKREVASKVYDLLQ
DENCLGKQQIDNLFLQNMPDIVVELLMSLHESPSGTSSSNNNPDGPQFYGELDPPPNPPY
FPSYVIKATLDYISSCHNSKLKSLVAILSKTPDSFQKILLSICKQAAESSNVYKKHQILT
IYHLFVNLLLAEIKDGLGGAWAFVLRDVIFTLIHHINCRSTGPRDDVSARSFMLCLDLLH
RVCQAAITNCKDALDCHLHVIVSSLIPLANSCAKIQEQVCDLLTFLVIESQNNENLYHTI
KLLDPFPDHPLFKDLRQAHQKIKYSQGPFSLLQEINHFLSVSLCESLPLTRLEGMNDLRK
QLEQHKDEIKGLVYDFQGNPQDSVIAKLVLSLLQLSKNAVHLDNGKDVLEAAGSCLGELG
PVDFCTIALQPQKELLYGRTVDVFEDKELQCVLVILKLINNALTDHCIHVRSAAATCLKN
ILATKTGAQFWEMYKESGDLMMVYLQPFRSPKKKFLDVENTHIGDTAMDALDDQSLWIPQ
NVSHEDWIKNLTCTLLESGGVRSEVLLLLKPMCEVKSDFCQAVLPYFIHNILLQDSGNLW
RKLLSKYIQGFFTSCCRSAPASSRSATPASSDSESEALAPGTVDITSRRTMLSVVEYLRK
QRRQGEGTAFDDNFWLDLNYLEVAMAVQSCSAHFTALLHAEIYTNKIKLDGEQRRGASSA
RKSLRFEEESQTLTIASMSEKSKEETGISLQDLLMDIYRSIGEPDSLYGCGGGKMLHPLA
RIRTYEHEAMWGKALVTYDLETSLPSATRQAGIMQALQNFGLNHMLSTYLRGLEHENADW
SSELQEIRFQAAWRNMQWDQSSSYKGDVAVPGYHGSLYHAIQSLKDNEFSAFHDHIKYAR
VKEVEELCKGSLESVYSLYPTLCRLQAIGELENAGKMFSRSVTELQLNDMYTKWEQQSQI
LKDSDFGFQEPVLTLRSVILETMLEKNGPNQNALKPIFTRHLVHLSQTARTASNTQLPEK
AMFKVKQHNSAHFIVSEWQLEEAQVFWAKREHSLALGILSQMVDKLVLYSLEVENDPNLQ
LIYVECLRLSGNWLSETCLASPTVIMQNYLEKAVEVAEDFSSGSSDELQEVRMKAFLSLA
RFSDAQYQRIDNYMKSSEFENKQTLLAKAKQEVELMRQHKVQTNRYTVKVQRELELDESE
IAALKEDRMRFLRTAIKNYISCLVSGEEHNMWIFRLCSLWLENSRVPEVNNIMKVESEKI
PSHKFLPLMYQLAARMGTKNMGRQEFHEVLNNLISRTSLNHPYHTLFIILALANANKDDM
VIKSDTKKSRLTKNVPKKISQTDEDRMEAARSIVNTIKKHRTHMVRDVERLCDAYIILAN
VDASQWKAQRKAIPIPSDQPITKLSNLQDVVIPTMELKVDPSGKYENLVTIQSFKPEFRL
AGGLNLPKIIDCVGSDGRERRQLVKGRDDLRQDAVMQQVFQMCNALLQKNSETRKRKLTI
RRYKVVPLSQRSGVLEWCSGTVPIGEYLVNSDDGAHKRYRPKDFSSLQCQKRMMDVQRGR
FEDKYQVFLDICDHFHPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYIVGLGDRH
VQNILIDEETSELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCE
KTMEVMRSSQDALLTIVEVLLYDPLFDWTMNPLKALYLQQDEAELNATLAEDPECNRNTC
SDSQSFNKVAERVLLRLQEKLKGVEEGTVLNVEGQVNLLIQQAMDPKNLSRLFPGWKAWV
NT seq
9183 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgctctacatgagctcctgctctgttgccgacaattggagacagacaaggcc
acagaaagacgaaaagaaattgataagttcaaacgtttgctccgggataaggaaacaatc
cagcagttggatcgtaactctgatcatcggcagaccaagcagcttaattgggatactgta
ttcaggttcttacaaaagtatatctacaaagagattgaaggccttaagtctgctaaagca
aatgtctcccaatcaacacatgccgctcgacagaagaaaatgcaggatattagcagcctt
gttaaatatttcattcgctgcgcaaataaaagagccccacggttaaaatgtacagaactt
cttctccatgtgagcgacacaataaaggaccccacaacatgtgctgcttatggtgctgac
tacagcagtatcctcttaaaagatatcctaactgtgcgcaagtactggtgtgagattact
gcaaagcaatgggaagagttattacacatttattgcaacctgtacttgaaaccaaacagt
gcgataaacagattgccggtggctcgcattattcacaccctcaccaggggatgctgtctg
cagtttgaaggcctccattccaagttattctctttcttttccaatgtgatgaccagagct
agagaggagaggaaccttccagggttggatcagattctcgctgctcttaatgtcttcctt
tccaccacatgtgtaaactgccgcatgcgggtgtgtaagttgggagaagagatcttccct
actgtagtgaagttgtggagcccgcacggaccgaaagatactctgaaagatgagattgtg
gagtttttccgactaatgcttcacattcatcatccaaaaggagccaagactacagaagaa
ggtgcttatgcattcgaaactgagcggtggcagagaaatgtgtacaatctatacgatgct
atggtgaatgagattagtcagattggcagcagaggaaaatactcttcaggatctcggaat
attgcagtcaaagagaatttggtggaattgatggcagatatttgtcatcagctcttcaca
gaaaacactcgtattttggaaatcactcaggcctcttttgccgtgactcagagggatcca
tctgcaagtatggtgccaagcaagcgtcgaaggatcgaattgggctgggaagtggtccgc
gaaaaacttcaaccatcagaaaatgattttgatgtgattccatggttacagattgtagct
tgtttaatcgcacgccacccagacagccttccgagtatggagatgacaccactactaacc
attctccaccagctcctggtccagcagaggcgaggcgagcgtgcaacttttgtactgagg
tctctgaaagaagtggctgtttgccaaatgcagaaaaatgatgtgattatgaccccaaag
tccgatcttcacaaactgtggactaaaatttgggctgtgacgattcgcagcattagctct
ccgcagacggagcctgaaagctttgcattgttgggcgtcatgttacaaggggggcttgta
tctgcagacagggacttctggaaaatcttctcgggatctgctggaaaaccctccagctct
gcaatgcactgcttaagtgtggccctggctctgacatcctgtgctgtcccagattacctc
tcctccggcctggagcaacatgtccatgagatcagtggggttaaaagacagctgaaagaa
gagatcattacgtggttactctttggcagccaggatgatgaaatggatgatgccagtgag
catgctccttgtattaataagtacttccaccaccctgccttccacagcgttcttgtaagc
cttacaatgaaggattccaatgctgctatgtcatattttgggaatccagtggactgcttg
caccataaaagaggaaaagacagcagattctcagagactgaagagctgtaccttctatcc
tcgtttaatgaaatggttacaatttcaaatgctgctgctgtggagaccaggggacagtcc
agctcctcatgtctgactgtgcatcattgtcttaaacagaaattggaatctgatctgctc
tctttatctgagcaactactcaatagttactcctcagagaccactcctccagatagtcta
gcccagtgtgccagccttttgattggtgtattggcttgttattgtcacgccgaggtcatc
aatgaagagcaagcctgtaaatctactttgttccagaaagcaaagatgttgatgcagtat
gctggtgagaccacggcattattaaagggaaagctaaatgaggaagccaaaattacttct
ttgggaatgatagtatcccattgtctaggctgtgtgtgtaattgtacaaagtctcgtcca
gctcattgtttttcagatttattccttcgtctttttacatcaaggatgttaaatgatttg
tgtgatatttctagaaatttgattgcaagcagcagcagtacagtggaagccatggagatt
gatattatggatggtgacatagaaacaagaatggatacggaagaccaaggtgctgtagat
cttattgatgatcattcttctcctgaagctacagaaagcgcagactttggagaatttcaa
aatgtcactggcgcagtgagccctttgtcagaggatcaccccagcaaacaagagatggtt
ttgatgcaggccctgcagttcctgtgtttctgtgcatcagctgctgtcaatcgatcagtc
aatttcagaccttctgacatacgaagaaaactcctcaaccttattgatacctcactggac
actagcaagcctcttcatcttcgtgtgtacttacaactactaaatgaccttcctgtgaaa
gatgttcctctgccaatggacgacattatcatgctgctaaagcctgtccctgacgtttgc
ttatcctaccgacgagaccaggaagtgtgcgccgccattttgaaaagcctcctcccagtt
gtgcagtgtctgggacaagaccaggatgaaaccgatgagaagtgtgatgctgaaggacag
ttgctaagtgtcatacagggcttctggcatctgactaaggaaggaaaacacactgcacta
gtgcgattggcccttgtgaactgtttgagaacattcattgaggttgatccccagggtaag
tgggccattcttaatgtaggaggggccgatatttctgtgcaagatgccttttctcaattc
cttgcagatgcacatcatcaggttcgcctgctcgctgctcagtctacaaacagactattt
caagacacaagatctcaagcacttcccctgaagttgcagaaggcggcatttaaaaatgtt
tacatgaaagtgcaagaaggcatgagttacttgtcccgcagtaatcaggatccagaggag
cttccagatgagaagtataatagaaactctacattgctgatgctggtgtcagtgattctt
ctgtccagtcctgtatgtgagaagcaggcgctatttgccatttgtcaatcagtgaaagag
aatggccttgatcctgcactcatcaaaaaggttttggagaaagtgtccttcactctggga
tatagaagtttaaaagacttcatgacttctcatttagattacttgattctcgagtggctt
agaatgaaaggtcccggttacaacttgtccacatttccctacactttgttacagtataca
acactgaaggatttttataggtcatgctacaaaatgttgattccacatctggtcattcgg
agtgattttgaagaggtgaagtccattgctcagtgcattgaagaggactggaaggtcctg
ttggctgcttgttttcccagaattttggtgaatattctgccatactttgtttctgattgc
tctggagactcggataggaagaagagggaagttgcaagcaaagtctatgacttgctacaa
gatgagaactgcctcggtaaacagcaaatagacaacctgttccttcagaatatgccagat
atagtggtggagctcctgatgtccctccatgaatctccaagtggtacaagttcaagtaac
aataacccagatggtcctcagttctatggggaattggatccacctccaaaccccccttat
ttcccctcctatgtcataaaagccacgttggattatatcagcagttgccataacagcaag
ctgaaaagtcttgtggcaattctctcaaagactccggattcctttcaaaagattttgttg
tctatatgcaagcaagccgcagagagcagcaatgtctacaagaaacaccagatccttacc
atttatcatctgtttgttaaccttcttctggcagaaattaaggatggcttgggtggagct
tgggcatttgtcctcagagatgtcattttcaccttgatacaccatatcaactgcagatcc
actggtcccagggatgatgtatcagctcgcagtttcatgctttgtcttgatcttttgcat
cgagtttgccaggcagccatcaccaactgcaaggatgccctagattgccacctccacgtc
attgtgagcagtctcatccctttggcaaacagctgtgccaaaatacaagagcaggtttgc
gatttgctaacttttttggtaattgaaagccaaaataatgaaaacctctaccacactatt
aaactcctggacccctttcctgatcaccctttatttaaggacctgcgtcaggcccaccaa
aagatcaagtacagccaaggaccgttctcacttctgcaggaaataaaccattttctctct
gtgagtttatgtgaatcactccctttgacccgactggaaggaatgaatgatttaaggaaa
caactggaacagcacaaagatgaaataaaaggccttgtctatgatttccaaggaaatcct
caggacagtgtcattgcaaagctggttcttagtcttttacagctatcaaagaatgccgtg
cacctggacaatgggaaagatgttttggaagctgcaggtagctgcctaggggagttggga
cctgttgacttttgcaccatagccctgcagccccagaaagagctgctttatggcagaact
gttgatgtgtttgaagacaaagagctgcagtgtgtgcttgtcatcctgaaattgataaac
aacgccctgacagatcactgcatccatgtgcgatcagcagctgctacatgtttaaaaaat
atcctggccacaaaaactggcgctcaattttgggaaatgtacaaagagagtggcgacctt
atgatggtttatctgcaaccatttcgctccccaaagaaaaagttcctggatgtggagaat
acccatattggagacactgcgatggatgcattggatgaccagagtttatggatcccacaa
aatgtcagccacgaagactggataaagaacttaacttgtaccttgttggagtctggggga
gttagaagtgaagtccttttgttactgaaaccaatgtgtgaggtgaaatcagacttttgt
caggctgtgttgccgtattttatacataatattctgctgcaagattccggaaatctatgg
agaaagcttctctccaagtacatccagggatttttcacctcttgctgtcgttctgcacca
gcttctagcagatcagctactccagcaagttcagactcggaatctgaagctctggctcct
ggaacagtggacattacctcccgaagaacaatgcttagtgttgtggagtatttgagaaag
cagagacgacagggtgagggaacagcttttgatgacaatttctggttggatcttaattac
cttgaggtggctatggcagtacagtcctgctccgcccactttacagctttgctgcatgct
gaaatctacaccaacaagatcaagctggatggcgagcaaagaaggggggcttccagtgct
cgcaagtctctaaggtttgaagaagagagtcagactctgaccattgccagcatgagtgag
aaaagcaaagaggagactggaatcagtttgcaggaccttttgatggatatttacaggagt
attggagaaccagacagtttgtatggatgtggtggagggaagatgcttcatccactcgcc
agaattcgaacatatgagcatgaagccatgtggggaaaagcccttgtaacttatgacctg
gaaaccagtcttccctctgctactcgccaggctggaatcatgcaggctttgcaaaacttt
ggcttgaatcacatgttgtccacctacctgcgaggacttgagcatgagaatgcggattgg
tcttctgagctccaggagattcgtttccaggcagcctggaggaacatgcaatgggaccag
agctcatcctacaaaggtgacgtggctgtgccaggctatcatggatctctctaccatgct
atacagtctctaaaggacaatgaattctccgcttttcatgaccatattaagtatgccaga
gttaaggaagtggaagagctgtgcaaaggcagcttggagtctgtatactctctgtatccc
acactttgtaggctccaagctattggagagctagagaacgcggggaagatgttctccaga
tcagttactgagcttcagttaaatgacatgtacacaaaatgggagcagcagtcccagatc
ctcaaagacagtgactttggcttccaggagccagtcttgactctgcgttctgtcattctg
gagacaatgctggagaagaatggccctaatcagaatgcccttaagcctatttttacaagg
cacttggtgcacttatctcaaactgctagaactgcctccaacacacagctcccagaaaag
gcaatgttcaaggttaagcaacataactcggcacatttcatagtgtctgaatggcaacta
gaagaagcacaagtgttttgggctaaaagggagcacagtcttgccctagggattctcagt
caaatggtggacaagctggtattatacagtttagaggttgagaatgacccaaatcttcag
ctgatttatgtagagtgcctgaggttgagtggaaactggctctcagaaacatgtctggca
agtcctacagtcattatgcagaactacctggaaaaggctgtggaagtggcagaggacttc
agcagtggtagcagtgatgagctgcaggaggtacggatgaaggcattcctctcactagct
cgtttttcagatgcccaatatcaaagaattgataattatatgaagtcatcagagtttgaa
aacaagcagacattacttgcaaaggccaaacaagaggtagaactaatgcgacagcacaag
gttcagactaacaggtatactgtgaaggtgcaacgagagctggagttggatgaatctgaa
attgcagctttgaaagaagatcggatgcgttttctgcgtacagctataaagaactatatt
agctgtctggtgtccggagaggaacacaacatgtggatcttccgcctttgctctctctgg
ctggagaattcccgggtgcctgaagttaacaacatcatgaaggtggagtcggaaaagatt
ccttcccacaagttcctccctctaatgtaccaactggctgctcgcatggggaccaagaac
atgggaagacaggagtttcatgaagtgctcaacaatctgatcagcagaacctctttgaat
cacccataccatacgctgtttattatcttggctctggcaaacgccaacaaagatgacatg
gtaataaaatcggacaccaaaaagagccgccttacaaaaaatgtcccaaagaagatttcc
cagactgatgaggatcgaatggaagctgcacgaagtattgtgaatacaataaaaaagcac
cgaacacacatggtgcgtgatgtggagaggctctgtgatgcatacataattctggccaat
gtggatgccagccagtggaaagcccagcgcaaagccatccccataccatcagatcagcct
atcacaaaactgagcaatttgcaagatgttgttattccaacaatggaactgaaggtcgat
cccagtgggaagtatgagaacttggtgacaattcaatcattcaagcctgagttccgcctg
gctggaggtctaaatctgccgaaaataatagactgtgtgggctcagacgggagagagaga
agacagcttgtcaagggccgggatgatctcagacaagacgcagtgatgcagcaggtgttc
cagatgtgtaatgcattgttacagaagaacagtgagaccaggaagagaaagctgactatc
cgcagatacaaggtagtgcctctgtctcagagaagtggggtactggagtggtgctctggc
acagttcctattggtgaatacctagtgaattctgatgatggtgctcacaaacgttaccgg
ccaaaggatttcagcagtttacagtgccagaagagaatgatggatgttcaaagaggacgg
tttgaagataagtaccaagttttcctggacatctgcgatcatttccatccagtgttccgc
tacttctgcatggagaagttcttagatccagccgtttggtttgagaagcgtttggcttat
acacgaagtgttgccacatcctccattgttggttacattgtaggacttggagacagacac
gtccagaacattctgatagatgaagagacatcagaactggtacacattgacctgggtgtt
gcttttgaacaaggcaaaatcctccccaccccagagactgtaccttttcgcctaacgcgc
gatattgtggatgggatgggtattactggtgtggagggagttttcagaagatgctgcgaa
aagaccatggaagtgatgagaagctctcaggatgctctgctgaccattgttgaggtgctg
ctttatgaccctctctttgactggactatgaatcctctgaaagctctttacctgcagcag
gatgaagccgaacttaatgctacacttgctgaggacccagaatgcaacagaaacacttgc
agtgattcacagagcttcaataaagtggcggaacgtgtcctcctccgactccaggagaaa
ctgaagggagtagaagaggggacagtgctgaatgtcgaaggacaagtgaatcttctcatc
cagcaagctatggatccaaagaacctgagccgactcttccctggctggaaagcctgggtg
taa
DBGET
integrated database retrieval system
