Rana temporaria (common frog): 120939977
Help
Entry
120939977 CDS
T07929
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtem03016
]
120939977 (TRDMT1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
120939977 (TRDMT1)
Transfer RNA biogenesis [BR:
rtem03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120939977 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
120939977
NCBI-ProteinID:
XP_040208399
LinkDB
All DBs
Position
5:complement(42532306..42596477)
Genome browser
AA seq
393 aa
AA seq
DB search
MAGLRVLELYSGLGGMHCGLTASGASADVVAAIDVNTTANEVYRYNFPNTPLWPKTIEGI
ALKELDSLSFDMILMSPPCQPFTRIGLQGDVSDPRAKSFLYVLEVLPRLQKTPKYILLEN
VKGFESSEARGTLIKTLQNCGYHFQEFLLSPTCLGIPNSRLRYFLIAKLQSEPFAFQTTN
KILETFPSTNESESPRTGCDLGLEAHSPTDTDVKKAASSAQSPDGGLVYKLETAAELERK
QSQDNDSSMETLQDFLEENTEEISQYLLPPKSLLRYALILDIVRPTCRRSTCFTKGYGHY
VEGTGSVLQMATEVEISSVYKSLETLPDEEKLAKLSTLKLRYFTPREIANLHGFPADFGF
PEKITSKQRYRLLGNSLNVHIVAGLITLLLQSH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctccgggtgttggagttgtacagcgggctgggcgggatgcactgcggcctg
acagcaagtggggcatcagcggacgtggtggcagctatagacgttaatactaccgctaat
gaagtctacagatataattttccaaacactccattatggcccaaaactatagagggaata
gcactaaaagaattggattccttatcgtttgatatgatcttgatgagtccaccctgccag
ccatttacacggataggcttacaaggtgatgtgtctgacccccgagcaaagagtttcctg
tatgttttggaagtcctgccaagacttcagaaaactccaaaatatattcttctggaaaac
gtgaaaggatttgaatcatctgaagcacgaggcaccttgatcaaaactttgcagaattgc
gggtatcatttccaggagttccttctctccccaacatgtctcggcattccaaattcaagg
ctgcggtactttctgattgctaagcttcagtcagagccatttgctttccagaccaccaat
aaaattcttgaaacttttcctagtacaaatgaatcagagtcaccaagaactggctgtgat
ctgggtttggaagcgcactcgccgacagacaccgatgtgaagaaagctgcaagcagcgcc
cagtctccagatggaggactcgtatacaagctggaaacggctgcggagctggagagaaaa
cagagtcaggacaatgactcctctatggagactctacaagactttttggaggagaacact
gaagagatcagccaataccttctgcctccaaagtcattactgagatacgctttaatcctg
gatatcgttagacccacgtgtcgaaggtcaacttgcttcacaaaaggatatgggcattat
gtagaaggaacgggttctgtcttacagatggcaacagaggtcgagatcagctctgtgtat
aaatcactggaaacattgcctgacgaggagaaactcgctaaactttccacattgaaactg
agatacttcacaccgagagaaattgctaatcttcatggattcccagcagattttggtttt
ccagaaaagataacatcaaaacagcgttatcggctgctcgggaacagtctgaatgttcat
atcgttgccggactcatcaccctcctacttcagtcgcattga
DBGET
integrated database retrieval system
