Rana temporaria (common frog): 120940460
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Entry
120940460 CDS
T07929
Symbol
GLB1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem00052
Galactose metabolism
rtem00511
Other glycan degradation
rtem00531
Glycosaminoglycan degradation
rtem00600
Sphingolipid metabolism
rtem00604
Glycosphingolipid biosynthesis - ganglio series
rtem01100
Metabolic pathways
rtem04142
Lysosome
Module
rtem_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120940460 (GLB1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
120940460 (GLB1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
120940460 (GLB1)
00604 Glycosphingolipid biosynthesis - ganglio series
120940460 (GLB1)
00511 Other glycan degradation
120940460 (GLB1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120940460 (GLB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120940460 (GLB1)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
120940460 (GLB1)
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120940460 (GLB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
PUA_4
PHP
Motif
Other DBs
NCBI-GeneID:
120940460
NCBI-ProteinID:
XP_040209272
LinkDB
All DBs
Position
5:complement(167542385..167619257)
Genome browser
AA seq
639 aa
AA seq
DB search
MIMWLHFGGLFLLLGLSIEISARTFEIDYKHNCFCKDGKPFQYISGSIHYSRVPSFYWKD
RLLKIKMAGLDAIYTYVPWNFHEPRPGVFDFSGDHDIETFLKLANEIGLLVILRAGPYIC
AEWDMGGLPPWLLAKKSIVLRSSDPDYLQAVDNWMSVFLPKMKPLLYQNGGPIITVQVEN
EYGSYFTCDYNYLRHLTKVFRQHLGDEVILFTTDGSGLSLVRCGSIQGLYTTVDFGPGTN
VTEAFAVQRFSEPNGPLINSEFYTGWLDHWGEPHSVVATDRIVKTLTEILDHGANVNMYM
FIGGTNFGYWNGANTPYEAQPTSYDYDAPLSEAGDLTDKYFAIREVIKKYKKIPEGPIPP
TTPKFAYGEIYMEKVETVLEALDILSPYGPIKSTYPLTFDDIKQYHGFVLYRTTLPRSCN
NPTTLATLFNGVRDRAYVTVNGVFQGILERDKEMSLNITGTQGAQLDLLVESMGRVNFGR
YINDFKGLLTNLTLDGEILANWTMYPLDIDSPVKSGHLMETSLNTSNSTSPAFYKGSFLI
PSGIPDLPQDTFIKFSGWTKGQIWINGFNLGRYWPSRGPQVTLYVPMHILTTSSLNNVTV
LELEHSPCDTGKCIVEFVDKPILSKRKTFIRPEYFFSKL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtggcttcacttcgggggcttgttcctgcttctaggactcagcatagaaatt
tctgcaagaacatttgaaatagattacaagcacaattgcttttgcaaagatggaaagcca
ttccaatatatttcaggaagcattcattattcacgtgttccaagcttttattggaaagat
cgtttactgaaaattaaaatggcgggattggatgcaatttatacgtatgtaccatggaac
tttcatgagccgaggcctggggtctttgatttttctggagatcatgatattgaaactttt
ttgaagttggctaatgaaattggattgttggtgatactgagagcaggtccctacatatgt
gcagaatgggacatgggaggattacctccttggcttttagcaaagaagtctattgttctc
cggtcttctgatccagattatctccaagctgtggataactggatgagtgtattccttccc
aagatgaaacctcttctttatcaaaatggtggtccaattattactgttcaggttgaaaat
gagtacggaagctactttacttgtgattataattatcttcgtcacctcacaaaagtgttc
cgtcaacatttaggggatgaagtgattttgtttacaacagatggctctggtctaagtctt
gtaagatgtggatccattcaaggcttgtatacaactgtggattttgggccaggaactaac
gtaacagaagccttcgcagttcagcgatttagcgaaccaaatggaccattgataaattct
gaattttatactggctggctggatcactggggagaaccacattctgttgtggcaacagat
cgcatagtcaaaacattaactgaaattcttgatcatggagcaaatgtcaatatgtatatg
tttataggtggaaccaattttggctactggaatggagcaaacacgccatatgaagcgcaa
cccacaagctacgattatgatgcaccattatctgaagctggagatctgaccgataaatat
tttgccattcgagaggttataaaaaagtataagaagatccctgaaggtcctattccacca
acaacacccaaatttgcttatggagaaatatatatggaaaaagttgaaactgtcctggaa
gcacttgatattttgtcaccatatggaccgattaaaagtacatatcctttaacatttgat
gacattaaacagtaccatggctttgtattgtacagaacaacattacccagaagctgcaat
aaccctacaacacttgctactttattcaatggagttcgtgatcgagcctatgtcactgtt
aatggggttttccagggcattttagagcgagataaagagatgtccctaaatataactggc
acccaaggagctcaacttgacttgctggtggaaagtatgggcagagttaattttggaaga
tatatcaatgacttcaagggtttgcttactaacctgactcttgatggagaaattctggct
aactggacaatgtatcccttagatatagacagtccagtaaagagtggacatttgatggaa
acctctctgaacacatcaaatagtacatctccagcattttacaaaggcagttttcttatt
cccagtggaattccagacttgcctcaggatacatttattaaattttccggatggacaaag
ggacagatttggatcaatggcttcaatctgggtcggtactggccatccagaggacctcaa
gtaacattatatgttcctatgcacattttaacaacatcttcattgaataatgtcacagta
ctggagcttgaacattctccctgtgatactgggaaatgcattgtagaatttgtggacaag
cctattctatctaaaagaaaaacctttattagaccggaatatttttttagcaaattgtga
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