Rana temporaria (common frog): 120943240
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Entry
120943240 CDS
T07929
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04010
MAPK signaling pathway
rtem04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120943240 (CACNA1H)
04020 Calcium signaling pathway
120943240 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120943240 (CACNA1H)
Ion channels [BR:
rtem04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120943240 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
120943240
NCBI-ProteinID:
XP_040212368
LinkDB
All DBs
Position
6:complement(21119303..21401365)
Genome browser
AA seq
2366 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECLSERCTILEAFDGFIFAFFAVEMVIKMIALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFMDQGFQISYNLTSLKPYYQVDETEE
NPFICSKHSDNGMLKCQDIPPKIDCANFNFPEIGNRNNCDLNQFYNICQPGDLNPHKGAI
NFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIA
TQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYDELLKYICHIFRKVKRRTLRLY
NNWQNKRRKKVNPNSVMNGQGRGRKCKRRITSIHHLIHHHHHHHHHHYHISNGSPRGPRS
SPEICDVEMKIIKPQNQLRLLPPSPSNQNTPANSESVHSIYHADCHYEGPQLKSCKSSNA
SSITKLDVGLNHTNMNYPTILPSPASKASPTTLPKGKRSGSNPGSLVNSPVSLNTDSYGK
MHCLVGEQGLCRSSSKLSNLSVPCSLPSPQARQIICELQNCTYCASLLENPEMEISDSES
CESDTNCVYEFTQDLRYGDQRDQIQKRRKYKKKEKEKEVNKVYKLWEEFTNRLKRIVESK
YFNRGIMIAILINTLSMGIEYHEQPEELTNALEISNIVFTSMFALEMLLKLLAFGMFGYI
KNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMD
NVATFCMLLMLFIFIFSILGMHLFGCKFTLRTDSGDTITDRKNFDSLLWAIVTVFQILTQ
EDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRSEADEDK
VSANFDEELEKLKDLRAAELKMYSLAVTPNGHLDPRCSMPPPIIMRTAATPMPTPKSSPC
MDSVHTFVDSRRESNASIDPSNCDQKSLASIRSSPCPPWGTYSNWGSRRSSWTSIGRAPS
IKKRNQSGERESLLSGEGKGSTDDDSDDCKSSSVARISLHRRAGSLDTRGTLDIPELLQV
PTLRHSLSVNPLAMVPADYQDCNGKMVHVPSDLFVRMEKHKEDPIDYEDDIEDSFCFRLR
KTLEPYKPKWCKTHEDWSLYMFSPQNQFRVMCQKIIAHKMFDHVVLVFIFLNCITIALER
PDIGSNSLERIFLSVSNHIFTAIFVVEMTIKLVALGFISGERAYLQSSWNVLDGVLVFVS
IIDIIVSLASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVL
ICCAFFIIFGILGVQLFKGKFYTCEGPDVRNVTNRSECIGPRFKWVRRKYNFDNLGQALM
SLFVLSSKDGWVNIMYDGLDAVAPDVQPIRNNNPWMLLFFISFLLIVSFFVLNMFVGVVV
ENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKALYMSEAQRRPYYADYSPTRRYIHTLC
TSHYLDLFITFIIGINVITMSMEHYNQPKSLDDALKYCNYIFTIVFVFEALLKLIAFGFR
RFFKDRWNQLDLAIVLLSIMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATG
MRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCNEENPCEGLSRHATFENF
GMAFLTLFRVSTGDNWNGIMKDTLRECSSDDRHCLSYLPIISPVYFVTFVLIAQFVLVNV
VVAVLMKHLEESNKEAREDAEMDAEIEMEMSRALTPIVGACPPTPDGRGIGGGQNPAKKE
LPVLLKQARGALSRENVTILIPESMEGSVLMKDIRPVSPVSHPQVLPFSLLPRTYSPEDG
DIYLRDGMGSQNLLAVRKVSVSRMLSLPNDSYMFRPVLPAKSSYPLRETEAYEDSCTIGS
VLSVNSQPVESSNSSKLPEECQLLSSASGHAEPDEMPKIPPPLSVSRSPSLHRLLHRQEA
IHMDDQNGDAKDDLQVETLENGKLRTPSNTLAPPLLCPSPLSLQGTPQSSPKPPSHHRHS
SVRTRKHVYSQHSIPSRPSSCSSENTNPEESAMESSDPADEEVSHINSSAKGWPVQSNHR
SLSVSPFISQASSPPPLLKNCNSTASLAGTSSKDLKKFNSVDTQGFLAKPMWAEDQRRHS
IQICPSIDDDGDSCFDLSIDDKHDSSILFQSDPEYINGVRRKKKMSPPCISIDPPMEDES
GTASRTKVSENSMMLRRRTPSCESTAYRDSLDLGDNQSGEQPSKSERRNQANCRNEHLVI
PGYTFDQLETNNFKEHLSEGGHPASPSAITVDSRPDNMALEILPLDHQHSNSSEKTRDFT
EIKSSFKNPALINASNTTEEVTDKPL
NT seq
7101 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcattttgctgaactgcgtcaccctcgggatgttccagccctgtgaagacgtg
gaatgtttgtcggagagatgcaccattctggaggcatttgatggcttcatcttcgctttc
ttcgctgtggaaatggtcattaagatgatcgcgttgggcatctttgggcagaagtgttac
ctgggagatacttggaacaggctggattttttcatcgtcatggctgggatgatggagtat
tctcttgatggacataacgtcagcctttccgccatccgcactgtacgagttttaaggccg
ctaagagccattaatagagtcccaagtatgagaatactggtgactttgctgttagataca
ctgcctatgttaggcaacgtccttctcttgtgtttctttgtgtttttcatcttcgggatc
gttggcgtccagctctgggctgggttactccggaacaggtgtttcatggaccaaggattc
caaatcagttacaacctcacctctctaaagccctactaccaagtggacgagacggaggag
aaccctttcatctgctcgaagcacagcgacaacggcatgctgaagtgtcaggacatcccc
cctaaaatcgactgcgccaacttcaacttcccagagatcgggaacaggaacaactgtgac
ctgaatcagttctacaacatatgccaacccggagacctgaatccacacaaaggggccatt
aattttgataacatcggctatgcctggatagccatttttcaggttataaccctggaaggg
tgggtggacatcatgtactatgtcatggatgcacattctttttacaattttatatatttt
atactacttataattgtggggtctttcttcatgataaacttgtgcctggttgtcatagca
acacagttttcggaaacgaagcagcgcgaaaatcagctcatgcaggagcagcgggcccga
tacctctccaacgacagcacaatcgccagcttctccgagccgggtagctgctacgacgag
ctgctcaagtacatctgccatatcttcaggaaggtgaaacgaaggacgctgcgcctctat
aataactggcagaacaagaggaggaaaaaggtcaaccctaatagtgtcatgaacggacaa
ggtcggggccgcaagtgcaagcggcgtatcacctccatccatcatttgatccatcaccac
catcatcaccaccaccaccattatcacataagcaatgggagtcccaggggccccaggtcc
agtccggagatctgtgatgtagaaatgaagatcataaagccacaaaatcaactgaggctc
cttccaccatccccgagtaaccagaacacaccagccaacagtgagtctgttcatagcatt
taccacgcggattgccactatgaagggccccagcttaaatcatgtaagtcttccaatgcc
tcctccatcaccaaactggatgtggggctcaaccataccaacatgaactaccctaccatc
ctaccttccccggccagcaaagccagtcccaccacgttgccgaaaggaaagagaagtggc
agtaatcccggaagtttggtcaacagcccagttagcttgaacactgactcctatggaaag
atgcattgtctagttggagagcaggggctgtgcagaagttccagcaaattatctaatctc
agtgtcccctgctccttaccaagccctcaggccaggcagatcatctgtgagcttcagaac
tgcacctactgtgccagcctactggagaacccagaaatggagatcagtgactctgaaagc
tgcgaatctgacacgaattgcgtgtacgagtttacgcaggatctccggtatggagaccaa
agagaccaaatacagaagaggaggaagtacaagaagaaagagaaagagaaagaggtcaac
aaggtctacaagctctgggaggagttcaccaacaggctcaagaggattgtggagagcaag
tacttcaaccgaggcatcatgatcgccatcttgattaacactctcagcatgggcattgag
tatcatgagcagccggaggagctgaccaatgccctggagatcagcaacattgtcttcacc
agcatgtttgccctggagatgctcctcaagcttctggcctttggtatgttcggctacatc
aagaatccgtataacatctttgacggcatcatcgttgtcatcagtgtttgggagatcatc
ggccagtcagatgggggtctgtctgtgctcagaacatttcgtctgcttcgcgtgttgaag
ctggtccgcttcatgccagctctgcggcgccagctggtggtcctgatgaagaccatggac
aatgtggccaccttctgcatgcttctcatgctcttcatctttatcttcagcattctcggc
atgcatctctttggctgtaagttcacactgaggacggacagcggagataccatcactgac
cgcaagaactttgattcccttctttgggccattgtgactgttttccagatcctcacacag
gaagactggaacgtggtcctgtacaacggaatggcctccacctcctcctgggcggctctc
tactttgtggctctaatgacatttgggaattatgtcctgttcaacctgttggtggccatt
ttggtggagggatttcaagcagagggggatgccacaaggtcagaagcagatgaggacaaa
gtctctgccaacttcgatgaagaactggaaaagttgaaagatctccgagccgcagagctt
aagatgtactcacttgcagtgacccccaatggacacctcgaccctcgttgttcaatgcca
cctccaattatcatgcgcacggctgctacaccaatgcccacgcccaagagctctccgtgt
atggactctgtacacacctttgtggattcccgaagggaaagcaatgcgtccatcgatcca
tccaactgtgatcagaagtctttggccagcatccggagttccccctgccccccgtggggc
acgtacagcaactggggaagccgccgttctagttggaccagtataggccgggccccaagc
atcaagaaaaggaaccagtctggagaaagggagtccttactctccggagaaggaaaaggt
agcacagacgatgactctgacgactgcaagtccagctctgttgccaggatatctctccac
cgccgggcaggatctttggacacccgtggcaccttggacatcccagagcttctccaagta
cccaccctgcgccactcgctcagtgtcaaccctctggctatggtgcctgcggactaccaa
gactgcaatggcaaaatggtgcacgtgcccagtgacctgttcgtcaggatggagaaacac
aaagaggaccccattgactatgaagatgacattgaggacagtttctgtttccgtctccgc
aagaccctggagccttacaaacccaaatggtgcaagacccatgaagactggtctctctac
atgttttcacctcaaaaccagtttcgtgtgatgtgccaaaaaatcattgcccacaagatg
tttgaccacgtggttctcgttttcatcttcctgaactgcataaccattgccctggaacgg
cctgatattggctcaaacagcctggagcggatctttctcagtgtctccaatcacatcttt
acagccatctttgttgtagaaatgacaattaagctggtcgcacttggtttcatctccggg
gagcgagcatacctacagagtagttggaacgttctagatggagtcttggtgtttgtttcc
attattgatatcatcgtgtccctggcctctgcaggtggtgccaagatcttgggcattctg
cgggtgctgcgtctgttaaggacactgcggcctttgagagtcatcagcagagcaccagga
ctcaagctggtggtggagactctgatttcctcattgcgaccaattggaaatattgtcctc
atctgctgcgctttcttcatcatctttgggattctgggagttcagctcttcaagggcaag
ttctatacctgcgaggggccagatgtccgcaatgtcaccaaccgatcagaatgcatcggg
ccacgattcaagtgggtgagacggaaatacaactttgataaccttggtcaggccctcatg
tcactgtttgttctgtcgtctaaagatggctgggtgaacattatgtatgacggactggac
gccgtggcccctgatgtacagcccatccggaacaacaacccctggatgctcctcttcttc
atctccttcctcctcatcgtcagcttctttgtcctcaacatgttcgtcggagtggtggtg
gaaaacttccacaagtgccgccagcaccaggaggctgaggaggcccggcgccgggaagaa
aaacggctgcgccgtctggagaaaaaacgcaggagtaaggcgttgtatatgtctgaagcc
cagcgaaggccatactacgcagactactctcctacccggcgttatatacatacactgtgc
accagccattacctggacctcttcattaccttcatcattggcatcaatgtgatcaccatg
tccatggagcattataaccagcccaagtccctggacgatgccctgaaatattgcaactac
atctttaccatcgtctttgtttttgaggctcttctcaagctaattgcctttggatttaga
agattttttaaggacaggtggaatcagcttgatctggcgatcgttcttctctccatcatg
gggataacactggaggagatagagatcaatgcctcccttcccatcaaccctaccatcatt
cgcattatgagagtgctgaggattgctcgagtgctgaaactgttgaagatggcaactggg
atgcgtgctctactggataccgttgttcaggcactgccacaggtcggtaacttaggcctt
ctcttcatgctccttttcttcatctatgctgccctcggagtcgagttatttgggaaattg
gtgtgtaatgaagagaacccatgtgagggcctcagcagacacgccactttcgagaacttt
ggcatggctttcctgactctgttccgtgtctcgacaggtgataactggaatggcatcatg
aaggatacactccgcgagtgcagcagcgacgacaggcactgcctaagctaccttcccatc
atctcccccgtctattttgtcacctttgtcctcatcgcccagtttgtcttggttaatgtt
gtggtggctgtgctgatgaaacacctggaggagagcaataaggaggccagggaagatgca
gagatggatgctgagatcgagatggagatgtctagggcactcacaccaatcgttggagcc
tgcccccctacaccagatggcagggggatcggtggggggcagaatccagccaaaaaggag
ctgccagtgctgctgaaacaagccaggggggctctgagccgggagaatgtcacaatattg
atcccagagtcaatggagggctcagttctgatgaaggacataaggcctgtctctcccgtt
tcccatccgcaggttctgcctttctccctgctgccccgaacctacagccctgaggatggg
gacatctacttgagggatgggatgggatcccagaacctgctggctgtcaggaaggtttcg
gtgtctagaatgctttcgttgcccaatgacagctacatgttccgccctgttctgccagca
aaatcgtcatacccgttgcgggagacggaggcctacgaggacagctgtacgataggatct
gttttatcggtcaattcccaaccagtggagtccagtaattcttcaaagttaccagaggaa
tgtcagctattatcttctgccagtggccatgctgaaccagatgaaatgcctaaaatccca
cctccactctcagtctcaaggtcacccagtctacatagactgctacacaggcaggaggcc
atccacatggatgatcagaatggtgacgctaaggacgatcttcaggtcgaaacattggag
aatggaaaactgaggacaccatcaaatacacttgctccacctcttctctgccccagccct
ctatctctgcagggaaccccccaatcttctcccaagccaccttcccaccacagacattcc
agtgtccgcacacgcaagcacgtctacagccaacacagtattcccagccgtccctcaagt
tgcagcagcgagaacaccaatccggaagagtctgcaatggagtcatcagacccggctgat
gaagaagtcagccacatcaacagttcagcaaaaggctggccagtacaatccaaccacagg
agcctctctgtctctccgttcatctcccaagcgtcatctcctccacctctactaaagaat
tgcaatagcacagccagcctggcaggtaccagcagtaaagacttgaagaagtttaacagt
gttgatactcaaggatttttagctaagccaatgtgggcagaagaccaaaggaggcactcg
atccagatctgcccctccattgatgatgatggagattcctgctttgatctgtccattgac
gataagcatgattcctccatcctctttcagtctgatccagagtacatcaatggggtccga
aggaagaagaagatgagcccaccttgtatttctatagatcctcccatggaggacgagagt
ggcacagcttcgcgtaccaaagtatctgaaaacagcatgatgttacgaaggaggacacca
tcgtgtgaatctacagcctacagggactctttagaccttggcgacaaccagtctggagaa
cagccgtccaaaagtgagaggagaaaccaagcgaattgtcgcaatgaacatttggtcatc
cctggatacactttcgaccagctggagaccaacaatttcaaagaacatttatcggagggt
gggcatcctgcatctccatctgcaatcacagtggactctaggcctgacaacatggcttta
gaaattttaccgctagaccatcaacatagcaacagctctgaaaagaccagagatttcact
gaaattaagagttcttttaaaaatcctgcactaattaatgcttctaacacaacagaggaa
gtaacagacaaaccactatag
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integrated database retrieval system
