Raoultella terrigena: NCTC13098_04311
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Entry
NCTC13098_04311 CDS
T06046
Symbol
dapE_2
Name
(GenBank) Probable succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00300
Lysine biosynthesis
rtg01100
Metabolic pathways
rtg01120
Microbial metabolism in diverse environments
rtg01230
Biosynthesis of amino acids
Module
rtg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC13098_04311 (dapE_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtg01002
]
NCTC13098_04311 (dapE_2)
Enzymes [BR:
rtg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NCTC13098_04311 (dapE_2)
Peptidases and inhibitors [BR:
rtg01002
]
Metallo peptidases
Family M20
NCTC13098_04311 (dapE_2)
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
VDR27936
UniProt:
A0A3P8M2Z4
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All DBs
Position
1:3583075..3584190
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AA seq
371 aa
AA seq
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MANATRELARRLLGFNTINPPGNEADCMRFFADWLHDNGFEVALSSFGEGRCNLIARLPG
ATAGKPLAFTGHLDTVPLGNAQWRFDPFGSQVENGRLYGRGSSDMKAAVAAFAVACVQRR
EAILAGRGAVLLITGGEETGCDGARALIASGTLPEIGALIVGEPTANYPVIGHKGALWLR
AETRGKTAHGAMPELGINAIYLAADALGKIRHFSPGAPHPLMKQPTLNVGRIEGGLNINS
VPDRACFDVDIRSAPNLQHAVIRQRLSALLGESVTLTTLVDLPAVLSEARHAWIAEVYQR
CRPLHDMPLAPRVVPYFTDASLLLPALGNPPCIILGPGEPSMAHQTDEYCLLSRLEEAER
LYGEIIGDWMA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcgacccgcgaactggcccggcggctgctgggcttcaacaccatcaacccg
ccgggaaacgaagccgactgcatgcgtttttttgccgactggctgcacgataacggcttc
gaggttgcgctgtcgtcgttcggcgaagggcgctgcaacctgattgcccggcttccgggg
gcgacggcgggtaaaccgctggcctttaccggccatctcgataccgtgccgctcggcaat
gcgcagtggcgcttcgatcccttcggctcgcaggttgagaacggccggctttacgggcga
ggatccagcgatatgaaggcagcggtggcggcgtttgccgtcgcctgcgtccagcggcgg
gaggcgatcctcgccgggcgcggcgcggtgctgctgatcaccggcggggaagaaaccggc
tgcgacggcgcgcgggcgctgatcgcctccggcacgctgccggagattggcgcgctgatc
gtcggcgaacctaccgccaattacccggttatcgggcataaaggcgcgctgtggctgcgc
gcggaaacccggggcaaaaccgcccacggcgcgatgccggagctggggattaacgccatc
tatctggcagcggatgcgctgggtaagattcgccatttttcgccaggcgcgccgcatccg
ctgatgaagcagcccacgctcaacgtcgggcgcattgagggcgggctcaatattaactcc
gtgccggaccgcgcgtgctttgatgtcgatatccgcagcgcccccaatttacagcacgcc
gtcattcgacagcggctgagcgcgctgcttggcgagagcgtgacgctcactaccctggtc
gatctgcccgcggtgctgagcgaagcgcgccacgcgtggatagccgaggtttatcagcgc
tgccggccgctgcacgatatgccgctggcgccgcgggtggtgccctactttaccgacgcc
tccctgctgctgcccgcgctgggtaatccgccgtgcattattctcggccccggtgagccg
tcgatggcccaccagaccgacgagtactgcctgctcagccggctggaggaggccgagcgg
ctgtacggggagattatcggcgactggatggcctag
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