Raoultella terrigena: NCTC13098_04956
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Entry
NCTC13098_04956 CDS
T06046
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00270
Cysteine and methionine metabolism
rtg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NCTC13098_04956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtg03000
]
NCTC13098_04956
03032 DNA replication proteins [BR:
rtg03032
]
NCTC13098_04956
03036 Chromosome and associated proteins [BR:
rtg03036
]
NCTC13098_04956
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rtg02048
]
NCTC13098_04956
Enzymes [BR:
rtg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
NCTC13098_04956
Transcription factors [BR:
rtg03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
NCTC13098_04956
DNA replication proteins [BR:
rtg03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
NCTC13098_04956
Chromosome and associated proteins [BR:
rtg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
NCTC13098_04956
Prokaryotic defense system [BR:
rtg02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
NCTC13098_04956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
UPF0300
Motif
Other DBs
NCBI-ProteinID:
VDR28572
UniProt:
A0A3P8L076
LinkDB
All DBs
Position
1:complement(4108690..4110891)
Genome browser
AA seq
733 aa
AA seq
DB search
MRESEIIIDNFAGGGGASTGIELATGRSVDIAINHDPNAVAMHTTNHPGTLHYCESVYSI
RPKVATAGRPVGLAWFSPDCRHFSKAKGAKPVEKSIRGLAWIVIRWALDVSPRVMMLENV
EEFKTWGPLLAAEMRPDPARVGETFQAFVGMLTTGIPADHPALVECCEFLELSTNSEQAQ
RLVAGLGYDVEFREMRACDYGAPTIRKRFFMVMRRDGQPIVWPEITHGDPKSAAVLAGKL
APFRTAAECIDWSIAARSIFDRKKPLAENTLKRIARGIQRFVIDSASPFIVKCNHTTTKG
KYDCFRGQPLADPLQTITKTHGFGLAVPHLTKFRTGATGQPVTDPVPTVTAGTSKRPGGN
GHALGIVEAELAPFLAGNGGSEYQAKPRPLDKPAHTILKESRACLVTPYIARIGQTGFGG
DRMSYDAKKPLTTVTSKNEHLLLTPIIARQFGGSIGHRADEPSATITAGGGGKSQLVVPT
LIQMGYGERPGQEPRVLQLNNPLGTVTAGGNKFATVSAFLAKHYGGNYTGPGVGLDEPAH
SVTTVDHHALVTAQVVGVGGRAGQSRPRDVNEPLQTMTTKADAAIVSSHLVKLRGTCRDG
QPTDEPMPTVTAGGQHVGEVKTTLAVEDYDEERAQQVLAFLKEYCGPDSTGLVEIDGVTY
RIVDIGMRMLQPRELYRAQGFPEWYIIDRDYRGVKYAKDKQVARCGNAVPPPFAEALVRA
NLPELCQLKERAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgagagaaagtgaaatcatcattgataactttgccggtggcggcggggcgagtacgggc
atcgagctggcgactggccgcagcgtggatattgcgattaaccacgatcccaacgccgta
gcgatgcacaccaccaatcacccgggaacgttgcattactgcgagtcggtatattctatc
cggccaaaagttgcgaccgccggccgcccggtggggttggcgtggttttcgccagattgt
cgccacttttcaaaagcgaaaggggcgaagccggtagagaaatcaatccgtgggcttgcg
tggatcgtcattcgctgggcgctggatgttagcccgcgggtgatgatgttggagaacgtg
gaggagttcaaaacgtggggcccactgctggcagctgaaatgcggccggacccggcgcgc
gttggtgaaacattccaggcattcgtcggcatgcttacaaccggcattccagcagatcat
cccgcgctggtggagtgctgcgagttcctggagttatcgacaaatagcgaacaggcgcag
cggctggttgccggactgggctatgacgtcgaattccgcgagatgcgcgcctgcgactat
ggcgcaccgaccatccgcaaaaggttcttcatggtgatgcgccgtgatggccagcctatt
gtctggccggaaatcacccacggcgacccgaaatcggcggcggtactggcaggcaagctg
gccccgtttcgcactgcggcggaatgcatcgactggtctattgcagcccggtcgatattc
gaccgcaaaaagccgttggcagagaatacgctcaagcgcatcgcccgcggcatccagcgt
ttcgttatcgatagcgcatcgccgtttatcgttaagtgcaaccacacgacaaccaaaggc
aagtatgactgcttccgggggcagccgctggcggatccgctacagacgattaccaaaacc
cacggctttggactggcagtaccgcacctgacaaaattccgcaccggcgccaccgggcag
ccagttactgatccggtacctacggtgaccgccggcacgtcaaaacgcccgggtgggaat
ggtcatgcactgggtatcgttgaagctgagctggcaccgttcctggccggaaatggcggc
agcgagtaccaggcgaagccacgtccactcgataaacctgctcacaccatcctgaaagag
tcccgagcctgtctggtcacaccatacattgcgaggattgggcagacgggattcggcggt
gaccgtatgtcttatgacgcaaaaaaacctcttacaacagttacaagcaaaaatgaacat
ttgttactgacaccaatcattgcgcgccagtttggtggcagcatcggccaccgcgcagac
gaacccagcgcgacgatcaccgcgggcggtgggggtaaatcgcagctggtggttccgacg
cttattcaaatgggttatggagagaggcccgggcaagaaccgcgcgtgctgcagttgaat
aatcctctgggcactgtcaccgccggcggtaacaaatttgcgacggttagcgcgttcctt
gcgaaacactacggcgggaactataccgggccgggcgtcgggttggacgagccagcacac
tcagtgactacggttgatcatcacgcactggtaacggctcaggttgttggcgttggtgga
cgagcagggcagagccgcccgcgtgatgtaaacgaacctctgcagacgatgacaactaaa
gccgacgcggcaatagtctcatctcacctggttaaactgcgtgggacatgccgcgacggt
cagcccactgacgagcctatgcctacggtcaccgctggcggccagcatgtaggagaggtt
aaaacgacactggcggttgaggactacgacgaagagcgtgcgcagcaggtgctggcgttc
ctgaaagagtattgcggaccggatagtaccggcctggttgaaatcgacggcgtgacgtat
cgcatcgttgatatcgggatgcgcatgctgcaaccgcgtgagctctatcgcgcgcaggga
ttccctgagtggtacatcatcgaccgggactaccgcggcgtgaagtatgcgaaggacaag
caagttgcgcgctgtggcaacgctgtgccgccaccgttcgccgaggcgctggtgagggct
aatttgccggagctatgccagttgaaagaaagagctgcgtga
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