Rhodanobacter thiooxydans: LRK53_04900
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Entry
LRK53_04900 CDS
T08065
Name
(GenBank) beta-galactosidase
KO
K12308
beta-galactosidase [EC:
3.2.1.23
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00052
Galactose metabolism
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
LRK53_04900
Enzymes [BR:
rth01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
LRK53_04900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_42
Glyco_hydro_42M
Glyco_hydro_14
DUF4434
Glyco_hydro_42C
Cellulase
Glyco_hydro_35
Motif
Other DBs
NCBI-ProteinID:
UJJ55732
LinkDB
All DBs
Position
complement(1138321..1140429)
Genome browser
AA seq
702 aa
AA seq
DB search
MLRPLFAAALTTVVMISGAAAGSRSQARGAALLHQREPMSFGAFYYPEQWPREQWRRDLD
GIARLGFDFTHMGEFGWTYLEPEEGRFDFQWLDDAIDLANKAGLRVILGTPSAAPPAWMG
ERYPEVYRVDEHGQRHEHGIRAEVSLSNPRYQAFVARLVTAMAQHYGHDRRVWGWQVDNE
PSSFADYSDSARDAFRRWLREKYGSIEAMNAAWGGSFWSSRYTSFEQVLLPNATLAAEDK
LSPHALLDLARFQADTTARFLDAQAAIIRQHAPGQWVTTNYTNVTTATDPRRSHGLDFPT
FTLYPVAGANSLGGDSYAIGKPANLMEAAAYFRPISGTFGVMELQPGQVNWGGINPQPMP
GAVSMWMWHAFASGASLLGTYRYRHPLRGSEMYHEGIVGTDGVTLSRTGREFADTVHAIK
ALEPKLDDHALLPARMAARSTGYLWSHDVFWDLEIQPQTSLWNSWSYRNGYTLAVKSTGA
PMDFIAADDDFGRYPFLIAPAYQMVGDALAAKWRHYVEQGGHLILTSRSGQKNASGHFHE
GPWAAPILDLIGDDVEGFDMLPQSADGKVSAEGKTHDWHRWADILSPRPGTEVLATYADH
YYAGKAAATTRRLGKGTVTMIGVSTDDGTLEREIVRSVYQHAGVAIEDLPTGVFLDWRGG
YGFLVNYNPKPFQLRLPAGARIVHGRMPLAPAQVLVWKEPSP
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggcctttgttcgcagcagccctgaccaccgtcgtgatgatctccggtgccgct
gccggcagccggtcgcaggcgcggggcgcagccctgctgcaccagcgcgagccgatgagt
ttcggtgcgttctattacccggagcaatggccgcgcgagcagtggcggcgcgacctggac
ggcatcgccaggctcggtttcgatttcacccacatgggggaattcggctggacctacctc
gagccggaggaaggccgcttcgatttccagtggctcgacgacgccatcgacctggccaac
aaggcggggctgcgcgtcatcctgggcacgccctcggccgccccgcctgcctggatgggc
gaacgctacccggaggtctaccgcgtcgacgaacacggccagcgccacgagcacggcatt
cgcgcggaggtgtcgttgtcgaatccgcgctaccaggccttcgtcgcccggctggtgacc
gcgatggcgcagcactacggccatgaccgccgcgtctggggctggcaggtcgacaacgag
cccagcagcttcgccgactacagcgacagcgcgcgcgacgccttccggcgctggctgcgc
gaaaagtacggcagcatcgaggcgatgaacgccgcgtggggcggctcgttctggagcagc
cgctacaccagcttcgagcaggtgctgctgcccaacgcgacgctggctgccgaggacaag
ctgagcccgcacgcgctgctggacctcgcccgcttccaggcggacaccaccgcgcgcttc
ctcgatgcgcaggccgcgatcatccggcagcatgcccccgggcaatgggtgaccaccaac
tacaccaacgtcaccaccgccaccgatccgcgccgcagccacggcctggactttcccacc
ttcacgctgtacccggtggccggcgccaacagcctcggcggcgacagctacgcgatcggc
aagccggccaacctgatggaggccgccgcgtatttccgccccatcagcggcacgttcggc
gtgatggagctgcagccgggccaggtgaactggggcgggatcaacccgcagccgatgccc
ggcgctgtcagcatgtggatgtggcatgcgttcgcctccggcgcttcgctgctcggcacc
taccgctaccgccatccgttgcgcggcagcgagatgtaccacgagggcatcgtcggcacc
gatggcgtgacgctttcgcgcacgggtcgcgaattcgccgacaccgtgcacgcgatcaag
gcgctggagccgaagctcgacgaccacgccctgctgccggcccgcatggcagcgcgcagc
accggctacctgtggagccacgacgtgttctgggacctggagatccagccgcaaaccagc
ctgtggaacagctggtcgtaccgtaacggctacacgctggcggtgaagagcaccggcgcg
ccgatggacttcatcgccgcggacgacgatttcgggcgctacccgttcctcatcgcaccg
gcgtaccagatggtgggcgacgcgctggcggcgaaatggcgccactacgtggaacagggc
gggcacctgatcctgaccagccgcagcggacagaagaacgcgtcgggccatttccatgag
ggcccctgggcggcaccgatcctcgacctcatcggtgacgacgtggagggcttcgacatg
ctgccgcagagcgccgatggcaaggtttccgccgaaggcaagacgcacgactggcaccgc
tgggccgacatcctttcgccgcgtcccggcaccgaagtgctcgccacctatgccgaccac
tactacgcgggcaaggcggccgcgacgacgcgccggttgggcaagggcacggtcaccatg
atcggcgtctccaccgacgacggcacgctggagcgcgagatcgtgcgcagcgtgtaccag
catgccggcgtggcgatcgaggacctgcccaccggggtgttcctggactggcgcggcggt
tacggcttcctggtcaattacaaccccaagccgttccaactgcggctccccgccggcgcg
cggatcgtgcatggccggatgccgctggcaccggcgcaggtgctggtgtggaaggagccg
tcgccatga
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