Rhodanobacter thiooxydans: LRK53_09160
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Entry
LRK53_09160 CDS
T08065
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00020
Citrate cycle (TCA cycle)
rth00785
Lipoic acid metabolism
rth01100
Metabolic pathways
rth01110
Biosynthesis of secondary metabolites
rth01120
Microbial metabolism in diverse environments
rth01200
Carbon metabolism
rth01210
2-Oxocarboxylic acid metabolism
Module
rth_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rth_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LRK53_09160
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LRK53_09160
Enzymes [BR:
rth01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
LRK53_09160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
UJJ53179
LinkDB
All DBs
Position
complement(2047926..2050766)
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AA seq
946 aa
AA seq
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MTTNLIREFFESSQLAGGNADYVESLYDAWLADTSSVPAEWADYFASFKGREAGDVSHAA
AIARIEAAQKRRHNGVAAAPVSDEHARKQAGVLRLLTAYRSRGHLAADLDPLGLTEKMPA
PDLGLAFHGLADADLDTEFDTGNYAGGGQRLKLRELLDRLKKTYASTIGAEFMHISNHEQ
RNWIYSRLEQATGRSGLDNAGKQRVLDGLTAAEGLERYLHTKYVGQKRFSLEGGDSLIPM
LDDVVRAAGDNGIKELVIGMAHRGRLNVLVNILGKPPKTLFDEFEGRFDHPDDPAHSGDV
KYHMGFSADVKTPKGGVHVALAFNPSHLEIVNPVVTGSVHARQTRRRDTAHTQSMAVLIH
GDAALSGQGVNMELFNMSQARGFKIGGSLHIVINNQVGFTISNPQDARSTMYCTDLAKMV
NAPVLHVNGDDPEAVILVTRLAYAFRKQFRKDVVIDLVCYRRHGHNEADEPAATQPVMYQ
IIKKRPTARALYQQQLVKEGVLAEGEAAKQFDAYRARLEAGAPMTELDTAPVRDGHVDWA
RFLGGKLSMPADTTVPKPKLLELAGKILAVPADLTLQARVAKIYDDRRKMAAGELPADWG
FAENLAYATLVDAGHDMRLVGQDSSRGTFFHRHAVLHDQKDGHTWMPLATVRGGADVEVI
DSLLSEEAVMAFEYGHSTTDPDTLNIWEAQYGDFANGAQVVIDQFISSGEAKWNRLCGLV
LLLPHGYEGQGPEHSSARLERFLQLCAMDNMQVCVPTTPAQNFHMIRRQMLRAARKPLIV
MTPKSLLRYKLAVSTLDELANGNFQLVIGEHRELAAKKVKRVVLCSGRVYYDLLEEAEKR
GLADVAIARVEQLYPFPREEVTAELDKYPSAKEVIWCQEEPMNQGAWFQIRHHLQACIGS
KHSLSYAGRARSPAPAAGHHNTHVAEQAALVEQALAASVGTDHAAE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
gtgactacaaacctgattcgcgagttcttcgaatcctcccaactcgctggcggcaacgcc
gattacgtcgaatccctctatgacgcctggctggccgacacctcgtcggtaccggccgaa
tgggccgattactttgcctccttcaagggccgcgaagcgggagacgtctcccacgccgcg
gccatcgcgcgcatcgaggcggcgcagaagcggcgccacaacggcgtcgccgccgcgccg
gtgagcgacgagcacgcacgcaagcaggccggcgtgctgcgcctgctcaccgcctaccgc
tcgcgcggccacctcgccgccgacctcgacccgctcggcctgaccgagaagatgcccgcg
ccggacctcggcctcgccttccacggcctcgccgacgccgacctcgacaccgaattcgat
accggcaactacgccggcggcggccagcgcctgaaactgcgcgagctgctggatcggctg
aagaagacctacgccagcacgatcggcgccgagttcatgcacatcagcaaccacgagcag
cgcaactggatctacagccggctcgaacaggccaccggccgcagcggcctggacaacgcc
ggcaagcagcgcgtgctggacggcctcaccgccgccgagggcctggagcgctacctgcac
accaagtacgtcggccagaagcgcttctcgctggaaggcggcgacagcctgatcccgatg
ctcgacgacgtggtgcgcgccgccggcgacaacggcatcaaggagctggtgatcggcatg
gcccaccgcggccgcctcaacgtgctggtcaacatcctgggcaagccgccgaagaccctg
ttcgacgagttcgaaggccgcttcgaccaccccgacgacccggcccactccggcgacgtg
aagtaccacatgggcttctccgccgacgtcaagacgcccaagggcggcgtgcacgtggcg
ctggcgttcaatccctcgcacctggaaatcgtcaacccggtggtgaccggctcggtgcac
gcgcgccagacccgccgccgcgataccgcgcacacgcagtcgatggccgtgctgatccac
ggcgacgccgcgctgtccggccagggcgtgaacatggaactgttcaacatgtcgcaggcg
cgcggcttcaagatcggcggcagcctgcacatcgtgatcaacaaccaggtcggcttcacc
atctccaacccgcaggacgcgcgctccaccatgtactgcaccgacctggccaagatggtc
aatgcgccggtgctgcacgtgaacggcgacgatccggaagcggtgatcctggtgacccgg
cttgcctacgcgttccgcaagcagttccgcaaggacgtggtgatcgacctggtctgctac
cgccgccatggccacaacgaggccgatgagccggccgccacccagccagtgatgtaccag
atcatcaagaagcgcccaactgcgcgcgccctgtaccagcagcagctggtgaaggaaggc
gtgctggccgaaggcgaggccgccaagcagttcgacgcctatcgcgcgcggctggaagcc
ggcgcgccgatgaccgagctggacaccgcgccggtgcgcgacggccacgtcgactgggcc
cgcttcctcggtggcaagctgtcgatgccggccgacaccacggtgccgaagccgaagctg
ctggagctggccggcaagatcctcgccgtgccggcggacctcaccctgcaggcccgcgtg
gcgaagatctacgacgaccgccgcaagatggccgcgggcgagctgccggccgactggggc
ttcgccgagaacctggcctatgccaccctggtcgatgccggccacgacatgcgcctagtc
ggccaggactccagccgcggcaccttcttccaccgccatgcggtgctgcacgaccagaag
gacggacacacctggatgccgctggccaccgtgcgcgggggcgccgatgtcgaggtgatc
gactcgctgctcagcgaggaagcggtgatggcgttcgagtacggccactccaccaccgac
cccgacacgctcaacatctgggaagcccagtacggcgacttcgccaacggcgcgcaggtg
gtgatcgaccagttcatcagctccggcgaggcgaagtggaaccgcctgtgcggcctggtg
ctgctgctgccgcacggctacgaaggccagggcccggagcattcctccgcgcgtctggag
cgcttcctgcagctgtgcgcgatggacaacatgcaggtctgcgtgccgaccacgccggcg
cagaatttccacatgatccgccggcagatgctgcgtgccgcgcgcaagccgctgatcgtg
atgacgccgaagtcgctgctgcgctacaagctggcggtgtccacgctggacgagctggcc
aacggcaacttccagctggtgatcggcgagcatcgcgagctggctgcgaagaaggtcaag
cgcgtggtgctgtgttccggcagggtctactacgacctgctggaggaagcggagaagcgc
gggctggccgacgtggcgatcgcgcgcgtcgagcagctgtacccgttcccgcgcgaggaa
gtgacggcagaactggacaaatatccttccgccaaggaagtgatctggtgccaggaggaa
ccgatgaaccagggcgcctggttccagatccgccaccacctgcaggcctgcatcggcagc
aagcacagtctctcctatgcggggcgtgcgcgctcgccggcacctgccgccggccaccac
aacacccacgttgcggaacaggcggcgctcgtcgagcaggcgctggccgcctcggtgggt
accgaccacgccgcggaataa
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