Ruminococcus torques: RTO_12320
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Entry
RTO_12320 CDS
T02606
Name
(GenBank) amino acid adenylation domain
KO
K12240
L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:
6.2.1.69
]
Organism
rto
Ruminococcus torques
Pathway
rto01053
Biosynthesis of siderophore group nonribosomal peptides
Brite
KEGG Orthology (KO) [BR:
rto00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
RTO_12320
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
rto01008
]
RTO_12320
Enzymes [BR:
rto01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.69 L-cysteine---[L-cysteinyl-carrier protein] ligase
RTO_12320
Polyketide biosynthesis proteins [BR:
rto01008
]
Nonribosomal peptide synthetase (NRPS)
Nonlinear NRPS
Pyochelin synthetase
RTO_12320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
TubC_N
Thioesterase
PP-binding
AMP-binding_C
DLH
Motif
Other DBs
NCBI-ProteinID:
CBL25876
UniProt:
D4M3R4
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All DBs
Position
1273389..1277714
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AA seq
1441 aa
AA seq
DB search
MMEDLIKAYEDRGVKFWVENGQLKFKAPSGTLNAEDKVKLRNVKEKLIEYYERKDKSALK
ADLSKRYEPFPLTGIQSAYLLGRNHNYEYGGVGCHAYFELSMPHMDAERLESAWHKVIMR
HDMLRAVFLQNGTQKILEHVDLPKLTYFNMKEAGAETTDSKLNEIRAELAHKQYQADCWP
LFDLYLTDTIDKSILHFSIDMLLSDFISMKTILNDLDAFYYEDGKNLKPLQVSFRDVLVY
QKEHENDEEVRTKKDRDCEYWKKRLQNFPDAPELPILPESKCEKVTFTQYRHFITPENWS
KLCEKARMQRLTPSGVVLSAYAEIIGRWSKRKDFCIDITILNRPSIHSQINEIVGDFTEV
DILEISPEYPSNFVERTRKIQNQLWEDLSHSAFTGIDVLREINRQSEKKAIIPVVYTSTV
GAADSEQQENWEFMRNSRITYKISQTPQVWIDCQVSEDNGGVLINWDVRDGVFPEGFVND
AFEAFSLLIERLCTNLKVWEQVHPVELPLKTGKVRKSVNKTEKDLPDKMLHEGFYNCLQN
CPDEIALIAAEGTFSYKELGSYVAGIQNELCKSGFRKGDFVAISADKGMWQIAAVLAVLF
SGGVYLPFDVSQPIARQNKILEKSGTKYLITNKKYQSLEWKEHIVVLAAEDINRTEQALT
IVEIPLENPAYIIHTSGTTGDPKGVVISHKAAVNTIEDINSRFDINSADRMFGLANLAFD
LSVYDIFGAFNAGAALVLPDPEKQKDPYYWVETIKKNEITVWNSVPAQMQMLVSVLESRG
VSGDFPLKVVLLSGDWIPVTLPDQIHTSCKKAKVVSLGGATEAAIWSIYHEIEEVPDGAV
SIPYGKPLANQKFYVLNEKMEQCPDWVPGDLYIGGKGLALEYLNKPEETNAHFMYDKQLQ
ERIYKTGDIGRYWPDGTIEFMGREDTQVKIHGHRIELSEIESALLSNTLVKTAVAVIVGK
RPQDYKIVAFVEGNIEVSELTEYIKTQVPEYMVPSRFEVNEKIPLSANGKVERKALKKLA
ETYFQNTGKCEMPPHEGLEKEIAELWKTLLKIDRVNRTDNFYDIGGDSLLVAQAVSKTKE
AINVAKDVEWDRLMIGMLQNPTIMDFAQFLNSVQIGTSHEENEISETPLNIIADIPEGGE
VMKVFFPGGIGFLQQFNTLFQILVNNPERTEGIAAFNYTEDKEYLDSEEKDHIVTIGRRY
ADLLLNSGYRKFKLIGYCMGGLVAIEAARALLEAGAEVLPVVTIDTIPIVLEMEGDLLME
RSYGLMVGADVSKAGHVKRDELVQMALELLKDHNNGFIEEDAILGLTGELPELAACYKKQ
KTLSKRERMENLKNAIPENSMQLSSEDMNRFDELFEIYKRNYRCAIGYTPKPFAGDLQAL
SCMDDHSPFVPVMKPGTEAFLSKCALGNLEVLPIGGNHLSCLMTPNVEGMANLLDGKGER
V
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggatttaattaaagcatatgaagaccggggtgtgaaattctgggttgaaaat
ggtcagttaaaatttaaagcaccgtcaggaacattaaatgctgaagataaagtaaaactg
cgaaatgtgaaagaaaaattgattgaatattatgagagaaaggataagtccgcgctcaaa
gcggacttatccaaacgatatgaaccgtttcctcttacaggtattcagtctgcctattta
cttggcagaaatcataattatgaatatggcggtgttggatgccatgcatattttgaattg
tcaatgcctcatatggatgcagaaaggttggagagtgcttggcataaagtgattatgcgg
catgatatgttacgtgctgtttttcttcaaaatggtacacagaagattttggagcatgtt
gacttgccgaaacttacctattttaatatgaaggaagctggagccgaaactacggattca
aaacttaatgaaatcagggctgagttggcgcataagcagtatcaggcggactgttggcca
ctttttgatctgtatctgacagacacgattgataagagtattcttcatttttctattgat
atgctgttatctgattttattagtatgaagactatattgaatgatttggatgcattctat
tacgaagatggaaaaaatctgaaacctctgcaggtatcattcagggatgtactggtatat
caaaaagaacatgaaaatgatgaagaagtgcgtacgaaaaaagatcgggattgtgagtat
tggaaaaagcggttgcagaacttcccagatgcaccggaactgccgattttaccagaatcg
aaatgtgaaaaagttacttttacacaatacagacatttcattacgccggaaaattggagc
aaattatgtgaaaaggcgagaatgcagaggcttactccctcgggagtagttttatccgca
tatgcagagattattggacgttggtcaaaaagaaaagatttctgtatagacattaccata
ttaaacagaccgtcaatacattctcaaattaatgaaatcgtgggagactttactgaggta
gatattttggaaatcagtcccgaatatccaagtaattttgttgaaaggacacgcaaaatt
caaaatcagttatgggaagatcttagtcacagcgcatttaccggtattgatgtattgcgg
gaaattaacaggcaaagcgaaaagaaagctattattccggttgtatacacaagcacagtg
ggagcggctgattccgaacagcaggaaaactgggagtttatgagaaattcccgtattact
tataaaataagtcaaacgcctcaagtatggatagactgtcaggtgtcagaagataatggt
ggagttttaatcaattgggatgtaagggatggtgtatttcctgaaggatttgttaatgat
gctttcgaagctttttccctgcttattgaacggttatgtacaaatttgaaggtatgggaa
caggtacatccggtagaattacctttgaagaccggaaaagtaagaaaatccgtaaataaa
acagaaaaagacctgcctgataaaatgcttcatgagggattttacaactgtttacagaat
tgtccggatgagattgcgttgattgcagccgagggaacattttcttataaagaattagga
tcatatgttgccggaattcaaaatgaactgtgtaagtctggattccgtaaaggggatttt
gttgcaatatctgctgataaagggatgtggcagattgcagcagtattggctgttttattt
tctggaggagtctatttaccctttgatgtgtcacagccaattgcaaggcagaataaaatt
ttggaaaagtccggaacaaaatatttgattacgaataaaaagtatcaatcgcttgagtgg
aaagagcacattgtcgttttggcagcagaagatattaacagaacggaacaagcacttact
atagttgaaattccattggaaaatccggcctatattatacatacatcagggaccaccggt
gaccccaagggggttgtcattagtcataaagcagcagttaatacaattgaggatattaat
tccagatttgatattaacagtgctgacagaatgtttggtttggccaatttagcatttgat
ctttctgtttatgacatttttggtgcatttaatgcgggagcagcgttggtacttcctgat
cctgaaaagcaaaaagatccatattactgggttgaaactattaaaaagaatgaaattact
gtatggaactcggttccggctcaaatgcagatgttagtctctgtattggaaagcagaggt
gtttcaggcgatttcccattaaaggtggttctgttatcaggagactggattcctgtaacc
cttccggatcagattcatacatcttgtaaaaaagctaaagttgttagtctgggtggtgct
acagaagctgcaatttggtcaatttatcatgaaatagaggaagtaccggatggcgcagta
agtataccttatggaaagccgcttgcaaatcagaaattctatgtgttgaatgaaaaaatg
gaacaatgcccggattgggtacctggagatttatatatcggtggtaagggtcttgctctt
gagtatttgaataaaccggaagaaacgaatgcacactttatgtatgataaacagttacag
gaaagaatatataaaactggagatattggtcgatattggccagatggaacaattgaattt
atggggagggaagatacccaggtaaaaattcatggacataggatcgaattgagtgagatt
gagagtgcattattaagtaatacattagtgaagacggctgttgccgtgattgttggtaaa
cgtccgcaagattataagatcgtcgcttttgttgaggggaatattgaagtttcggaactt
actgaatatattaaaacacaggtgccggaatatatggttccatcaagatttgaagtaaac
gagaaaattccgttgtctgcaaatggaaaagttgaaaggaaagctttgaaaaaattagca
gagacatacttccaaaatactggtaaatgtgaaatgccgccacatgaaggattggagaaa
gagatagctgaattatggaaaactctattaaagattgatagagtaaatcgaacagataat
ttctatgacattggtggcgattcattattagttgctcaggctgtgtcaaaaacaaaggaa
gctattaatgtggccaaggatgtagaatgggatagattaatgattggaatgcttcaaaat
ccaactattatggattttgcacaatttttaaattctgttcaaataggtacttcgcatgag
gaaaacgaaatatctgaaacaccattgaatatcatcgcagatattccagaaggtggagaa
gtgatgaaagttttcttcccgggtggaattggcttccttcagcaatttaatactttattc
caaattcttgtgaataatccggagcgaacagaaggcattgcagcatttaactatacagag
gataaggaatacctggattctgaagaaaaagatcatattgtaacaattggaagacgctat
gcagatttacttttgaatagtggttatagaaaatttaagttaattggatactgtatgggt
ggattagttgcaattgaagctgcaagagctcttttagaagcaggcgcagaggttttaccg
gtagtaacgattgatacaattccgattgttctcgaaatggagggcgacttgttgatggaa
cgaagctatggattaatggtcggtgcggatgtatcaaaagcaggtcatgttaagcgtgat
gaattagtacagatggcacttgaattattgaaggatcataacaatggttttattgaagag
gatgcaatattaggtctgacaggagagttgccggaactggcagcttgctataaaaaacaa
aaaacactttcaaaaagagagcgtatggagaacttaaaaaatgcaattccagaaaatagt
atgcagctatccagtgaggatatgaaccgatttgatgaactttttgaaatttacaagagg
aattatcggtgtgcgattggttatacaccgaaaccgttcgcgggagatttacaggcattg
agttgtatggatgaccattctccatttgttcctgtaatgaaaccgggaacagaggcattt
cttagtaaatgtgcacttggaaatttagaggttctgccaataggaggaaatcatttaagc
tgtttaatgacacctaatgttgaaggaatggcgaatttgttggatgggaaaggagaacgg
gtatga
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