Rhincodon typus (whale shark): 109911717
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Entry
109911717 CDS
T06055
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X4
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00310
Lysine degradation
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109911717 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109911717 (setdb2)
Enzymes [BR:
rtp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
109911717 (setdb2)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109911717 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
109911717 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
109911717
NCBI-ProteinID:
XP_020366677
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All DBs
Position
11:68050173..68123389
Genome browser
AA seq
899 aa
AA seq
DB search
MKSMKFADSSGANAEGIQDTTWAEENKPEPQKEQHTCSLKTYAQRCSVCNRTEAGINCEL
KGFMTTYQRNCTGSDSVKLVKNIDEGIDRLHCKSHRSHEEDRRNKKAHESPSDGCCSSSS
EESERSNNTAETFKQKIRNKVKDGGRFRKCQKSPPHLSDVDGTIQDSGVPKASFQEHGYF
KEAKLFWTKVCATGSVDHLFEELSDVLNCLKQKITDGTANDQDYLKALILVRKAGIHDSS
LSFDTSENEEQFQHDSEEEISEKVMISEEMEAQSTPSSSLFMQASVIKSVPSSAASPPST
DGFIQPNTPNQLTFEQHQCSGLCIARVTPPTPDHFKGENPLRIPILCQFQRRHGKLHWDT
EVVDPPHVTYKAPCGRGLRNFKEVRDYIFETQCDFLALDFFSFNTYVQLSRTISCKNPVI
YENDISHGVEPVPIPLYNAIDVSKPRYFKYRKIRLPHGYLISRSAEMFQQKCNCTDGCND
KSRCACQQQTANVNKRFKGATGYEYKRLLQSAPSGLYECNRWCKCNERLCENRVVQHGLK
TRLQLFKTKKKGWGVRCRDDIDKGTFVCCYAGRVLNIVNAVENQRNDEIINYDIDVGRSN
IVKPSSKVEKNGSHLESDGELMDAMEDRKTHMKVEEATPLHTTSALSQKGREKPECEKSY
LHSSEKSANKRPKTKTALLQARRRRLLEQGQISITYSSSEDDNSESSGQRSKKIPRTLEP
FSLKQHITLSDNQLINSDKGDSDNRSCVGYGINYSISLGENIFESPASKTSDEWENETNN
KKANVQDKLIQNNHHKEQASELQRICNVNEQGDSCYLLDATKEGNIGRFINHSCDPNLMV
QSVFVDTHDKNLPWVAFFTNRYIKAGSELTWDYRYSTGSMPDEEIPCLCGSANCKESIV
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccatgaagtttgcagacagttctggtgcaaatgctgaaggtattcaagacact
acatgggctgaagaaaataagccagaaccacaaaaggaacaacatacctgtagcctaaag
acatatgctcagagatgctctgtttgcaatcggacagaagctggcataaactgtgaactt
aagggcttcatgacaacttatcaacgaaattgcacaggttctgacagcgtaaagcttgtt
aaaaatattgatgaaggaattgacaggttgcattgcaaaagccatagaagccatgaagaa
gatagaagaaacaagaaagcccatgaatcaccctctgatggctgctgcagcagcagtagt
gaggaaagtgagaggtctaataatacagcagaaaccttcaaacagaaaatcaggaacaaa
gtgaaagatggtggacgattcagaaaatgccagaaatctcctcctcatttatcagatgtt
gatggaaccatacaggattccggtgttcccaaagcatctttccaggaacatggctatttc
aaagaagctaaattattttggactaaagtatgtgctactggaagtgtggatcatttattt
gaggaactcagtgatgtgttaaactgcctgaaacagaaaatcacagatggtacagcaaat
gaccaagattatttgaaagccttgattttagtccggaaggccggaatccatgactcttca
ctttcatttgatacatcagaaaatgaggaacaatttcagcatgacagtgaagaggagata
tcagaaaaggtcatgatttctgaagaaatggaagcacaatctacaccaagcagttccctg
tttatgcaagcatctgtaattaaaagtgtgccttcctcagctgcctccccaccctctaca
gatggattcatccagcctaacactcccaatcagttgaccttcgaacagcaccagtgcagt
ggtttgtgtatcgcaagagtgacacctccgacgcctgaccatttcaaaggggaaaatcca
ttgagaattcccatactttgtcagtttcaaaggcgacatgggaaattgcattgggatact
gaggtcgtggatcctcctcatgtcacttacaaagctccttgtggaagaggtttgcggaat
ttcaaggaggtgcgtgattacatttttgaaacccagtgtgactttctggcgttggatttt
ttctctttcaacacttacgtccagctttcacggacaatttcttgcaagaacccagttatt
tatgaaaacgacataagccatggtgtagaacctgtgccaatccctctgtataatgcaatt
gatgtctccaaaccacggtactttaaatatagaaaaatacggttgcctcacggatatctt
attagcaggtcagcagagatgtttcaacagaaatgcaactgcaccgatggctgcaacgac
aaatctaggtgtgcctgccaacaacagacagcaaatgtcaacaaaagatttaaaggggca
actgggtatgaatataaacgacttctccaaagtgcaccttctggattatatgaatgtaac
agatggtgcaaatgcaatgaaagattatgtgaaaacagagttgtacagcatggccttaag
acccgactgcagttatttaaaactaaaaagaaaggctggggagttcgttgcagagatgat
attgacaaaggaacctttgtgtgttgttatgcggggagagtactaaacattgtaaatgca
gtggagaaccagagaaatgatgaaattattaattatgatattgatgtgggacgtagcaac
atagtaaagccttccagcaaggtagagaaaaacggatcacatttggaatcagatggtgaa
ctaatggatgcaatggaagacagaaagacccatatgaaagtagaagaagcaactccttta
catacaacttcagccttaagtcaaaaaggcagggagaagcctgaatgtgaaaagtcatat
cttcatagttctgaaaagtcagcaaataaaaggcctaaaacaaagacagcccttctgcag
gctcgacgaaggcggcttctggagcaggggcagatttcaattacgtacagcagttcagag
gacgacaacagtgaatcatcagggcagcgatccaaaaagatcccaagaacacttgagcca
ttttcactaaagcaacacattactctgtcagataatcaacttattaacagtgacaaagga
gactcggacaatagaagctgtgtcggttatggaataaactattctatttctttgggtgaa
aatatttttgagagtccagcatctaagacatcagatgaatgggaaaatgaaacaaacaac
aaaaaggcaaatgtacaagacaagttgattcagaataaccatcacaaagaacaggcttca
gaattacaaagaatatgtaatgttaatgaacaaggggattcctgttatttattggatgct
acaaaagaaggaaacataggccgatttattaatcatagctgcgatccaaaccttatggta
caaagtgtttttgtagatacacatgacaagaatttgccgtgggttgcttttttcactaac
aggtatatcaaagcaggatcagagttgacatgggactacagatactcgacaggaagcatg
cctgacgaagaaattccatgtctttgtggatctgccaattgcaaagaaagtatagtgtga
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