Rhincodon typus (whale shark): 109911717
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Entry
109911717 CDS
T06055
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X4
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00310
Lysine degradation
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109911717 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109911717 (setdb2)
Enzymes [BR:
rtp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
109911717 (setdb2)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109911717 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
109911717 (setdb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Spe-44
Motif
Other DBs
NCBI-GeneID:
109911717
NCBI-ProteinID:
XP_020366677
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All DBs
Position
11:68050173..68123389
Genome browser
AA seq
899 aa
AA seq
DB search
MKSMKFADSSGANAEGIQDTTWAEENKPEPQKEQHTCSLKTYAQRCSVCNRTEAGINCEL
KGFMTTYQRNCTGSDSVKLVKNIDEGIDRLHCKSHRSHEEDRRNKKAHESPSDGCCSSSS
EESERSNNTAETFKQKIRNKVKDGGRFRKCQKSPPHLSDVDGTIQDSGVPKASFQEHGYF
KEAKLFWTKVCATGSVDHLFEELSDVLNCLKQKITDGTANDQDYLKALILVRKAGIHDSS
LSFDTSENEEQFQHDSEEEISEKVMISEEMEAQSTPSSSLFMQASVIKSVPSSAASPPST
DGFIQPNTPNQLTFEQHQCSGLCIARVTPPTPDHFKGENPLRIPILCQFQRRHGKLHWDT
EVVDPPHVTYKAPCGRGLRNFKEVRDYIFETQCDFLALDFFSFNTYVQLSRTISCKNPVI
YENDISHGVEPVPIPLYNAIDVSKPRYFKYRKIRLPHGYLISRSAEMFQQKCNCTDGCND
KSRCACQQQTANVNKRFKGATGYEYKRLLQSAPSGLYECNRWCKCNERLCENRVVQHGLK
TRLQLFKTKKKGWGVRCRDDIDKGTFVCCYAGRVLNIVNAVENQRNDEIINYDIDVGRSN
IVKPSSKVEKNGSHLESDGELMDAMEDRKTHMKVEEATPLHTTSALSQKGREKPECEKSY
LHSSEKSANKRPKTKTALLQARRRRLLEQGQISITYSSSEDDNSESSGQRSKKIPRTLEP
FSLKQHITLSDNQLINSDKGDSDNRSCVGYGINYSISLGENIFESPASKTSDEWENETNN
KKANVQDKLIQNNHHKEQASELQRICNVNEQGDSCYLLDATKEGNIGRFINHSCDPNLMV
QSVFVDTHDKNLPWVAFFTNRYIKAGSELTWDYRYSTGSMPDEEIPCLCGSANCKESIV
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccatgaagtttgcagacagttctggtgcaaatgctgaaggtattcaagacact
acatgggctgaagaaaataagccagaaccacaaaaggaacaacatacctgtagcctaaag
acatatgctcagagatgctctgtttgcaatcggacagaagctggcataaactgtgaactt
aagggcttcatgacaacttatcaacgaaattgcacaggttctgacagcgtaaagcttgtt
aaaaatattgatgaaggaattgacaggttgcattgcaaaagccatagaagccatgaagaa
gatagaagaaacaagaaagcccatgaatcaccctctgatggctgctgcagcagcagtagt
gaggaaagtgagaggtctaataatacagcagaaaccttcaaacagaaaatcaggaacaaa
gtgaaagatggtggacgattcagaaaatgccagaaatctcctcctcatttatcagatgtt
gatggaaccatacaggattccggtgttcccaaagcatctttccaggaacatggctatttc
aaagaagctaaattattttggactaaagtatgtgctactggaagtgtggatcatttattt
gaggaactcagtgatgtgttaaactgcctgaaacagaaaatcacagatggtacagcaaat
gaccaagattatttgaaagccttgattttagtccggaaggccggaatccatgactcttca
ctttcatttgatacatcagaaaatgaggaacaatttcagcatgacagtgaagaggagata
tcagaaaaggtcatgatttctgaagaaatggaagcacaatctacaccaagcagttccctg
tttatgcaagcatctgtaattaaaagtgtgccttcctcagctgcctccccaccctctaca
gatggattcatccagcctaacactcccaatcagttgaccttcgaacagcaccagtgcagt
ggtttgtgtatcgcaagagtgacacctccgacgcctgaccatttcaaaggggaaaatcca
ttgagaattcccatactttgtcagtttcaaaggcgacatgggaaattgcattgggatact
gaggtcgtggatcctcctcatgtcacttacaaagctccttgtggaagaggtttgcggaat
ttcaaggaggtgcgtgattacatttttgaaacccagtgtgactttctggcgttggatttt
ttctctttcaacacttacgtccagctttcacggacaatttcttgcaagaacccagttatt
tatgaaaacgacataagccatggtgtagaacctgtgccaatccctctgtataatgcaatt
gatgtctccaaaccacggtactttaaatatagaaaaatacggttgcctcacggatatctt
attagcaggtcagcagagatgtttcaacagaaatgcaactgcaccgatggctgcaacgac
aaatctaggtgtgcctgccaacaacagacagcaaatgtcaacaaaagatttaaaggggca
actgggtatgaatataaacgacttctccaaagtgcaccttctggattatatgaatgtaac
agatggtgcaaatgcaatgaaagattatgtgaaaacagagttgtacagcatggccttaag
acccgactgcagttatttaaaactaaaaagaaaggctggggagttcgttgcagagatgat
attgacaaaggaacctttgtgtgttgttatgcggggagagtactaaacattgtaaatgca
gtggagaaccagagaaatgatgaaattattaattatgatattgatgtgggacgtagcaac
atagtaaagccttccagcaaggtagagaaaaacggatcacatttggaatcagatggtgaa
ctaatggatgcaatggaagacagaaagacccatatgaaagtagaagaagcaactccttta
catacaacttcagccttaagtcaaaaaggcagggagaagcctgaatgtgaaaagtcatat
cttcatagttctgaaaagtcagcaaataaaaggcctaaaacaaagacagcccttctgcag
gctcgacgaaggcggcttctggagcaggggcagatttcaattacgtacagcagttcagag
gacgacaacagtgaatcatcagggcagcgatccaaaaagatcccaagaacacttgagcca
ttttcactaaagcaacacattactctgtcagataatcaacttattaacagtgacaaagga
gactcggacaatagaagctgtgtcggttatggaataaactattctatttctttgggtgaa
aatatttttgagagtccagcatctaagacatcagatgaatgggaaaatgaaacaaacaac
aaaaaggcaaatgtacaagacaagttgattcagaataaccatcacaaagaacaggcttca
gaattacaaagaatatgtaatgttaatgaacaaggggattcctgttatttattggatgct
acaaaagaaggaaacataggccgatttattaatcatagctgcgatccaaaccttatggta
caaagtgtttttgtagatacacatgacaagaatttgccgtgggttgcttttttcactaac
aggtatatcaaagcaggatcagagttgacatgggactacagatactcgacaggaagcatg
cctgacgaagaaattccatgtctttgtggatctgccaattgcaaagaaagtatagtgtga
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