Rhincodon typus (whale shark): 109912659
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Entry
109912659 CDS
T06055
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109912659 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109912659 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109912659 (grin2aa)
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Glutamate (ionotropic)
109912659 (grin2aa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
109912659
NCBI-ProteinID:
XP_048465634
LinkDB
All DBs
Position
21:9230704..9480952
Genome browser
AA seq
1481 aa
AA seq
DB search
MSGACYTHPLTGERTAEIFAGVVPTNFAYFHASIVAGTRAAAAECKGDKLEIKVAFCGDA
ATHTAKELRNMGRLGLLAVLALDFLIVHLELSGGQPAYPTLNIAVILGRSPDSPGFRDVW
VREDGPGFPIDVNVVTVAVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAIAQILDF
ISSQTFIPILGIHGGSSMILADKDQQSTFFQFGASIHQQVGVMLNIMEEYDWHEFSIVTS
TFPGYHEFISILKTTVENSFVGWELLSTITLDAVVGDSKAQIQLKKIQSSVILLYCSKDE
AIFILEEARSLGLTGYGFIWIVPSLVTGNTDNIPEAFPAGLISVSYDEWDYSLTERVMDG
VGVITTAASAMMEQYGYIPEAKTSCYGQLEKKVLPFLSLHKFMMNVTWNGKDLSFTRDGY
QANPKLVVIVLNKERTWEKVGKWENHSLALKYPVWPRFNSFADSEVDDNHLTIVTLEETP
FVIVEDVDKLTGTCARSNVPCRKNVKAVNSTDKGIYVKKCCKGFCIDILKKLAKAVKFTY
DLYLVSNGKHGKKINGVWNGLVGDVMYQRAAMAVGSLTINEERSEVVDFSVPFVETGISV
MVSRSNGTVSPSAFLEPFSAAVWVMMFVTLLIVSAIAVFAFEYFSPVGYNRNLAKGRAPH
GPSFTIGKAIWLLWGLVFNNSVPVENPRGTTSKIIVSVWAFFAVIFLASYTANLAAFMIQ
EEFVDQVTGLSDKKFQRPYDHSPPFRFGTVPNGSTERNIRNNYPDMHAYMSKYNQKGVQD
ALVSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYVFSTTGYGIALQKSSPWKRQI
DLALLQFVGDGEMEELESLWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLITF
VWEHWFYWSLRHCFMGTCTGKPGLLFSISRGIWSCIHGVPYEEKKKSPNLDLNSPQTNIL
RLFNTAKTMANMSNLNASRANSPKRTSNFIQKGSLLLDVVDQKGNFLYSDNRPYQPKETG
FTDNTSEMMTFNVNRQKDNRNNYILQGQHPLTLNEANPNTVEVAVSSDTPKLNSRPRQLW
KKSVETLRQNQGSLVESVNVEPKQPVKNQRYLPEDVVHSDMSDCSSRTTSYKDPDNNQKY
HKHKETFKKKSMMAKYPRDCSEIELSYLRAKESQQHHRDKVYTIDSDRESSYHSDQHHYR
ENVAIPEGLDYPQVYHDQNENYRKQEAVLHVNRTPQHNEDNLTNAENKYSLYNKHYSLKE
KNLSPVDYNDRYKQPIAHCRSCLSKLPNYTPHYSVRSPYNRCDACVHTANLYDISEDHML
QEPVSSMCPEESFVHHWVGSEASNMQKVNRLRISRQHSFDNILENPKEVDLGRPARSVSL
KEKDKFQDDPYAHVFDIKPEKLFSTKVSVFDHNLEETKRSKSLYPDHVSENPFWHSFRED
QHLVHGRSSSDIYKQSAASKIGLTGLSYYLMAKEQQKRDTC
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagcatgttacacgcatccgctgacaggcgagcgcaccgcggaaatattcgct
ggcgttgttccgaccaactttgcatactttcatgcttcgatagttgccggtacaagagcc
gctgctgctgagtgcaaaggagataaactggagattaaagtggcattctgtggagatgca
gcgacccacacagcgaaggagcttcggaacatggggcgcctgggcttgctagcggtgctg
gccctggacttcctgatcgtgcacttggagttgagcggggggcagccggcttacccgacc
ctgaatatcgccgtcattctgggcaggagccccgacagccccggttttcgggacgtgtgg
gtccgggaagacggccccgggttccccatcgatgtcaacgtggtgaccgtggcggtgaac
cagaccgacccgaagagcattatcacccacgtgtgtgacctcatgtcaggcaccaagatt
cacggcgtggtctttggagatgacactgaccaggaggctatcgctcagattttggatttt
atatcctcccagacttttatccccatcctgggaatacacggcggctcttccatgatcctg
gcagataaagatcagcaatcaacatttttccagtttggtgcttccattcatcaacaagtt
ggagtgatgctaaatatcatggaagaatatgactggcatgagttttccattgtaaccagc
accttccctggataccatgagtttattagtatactaaaaacaacagtcgaaaacagtttt
gtgggctgggagctactcagcaccatcacattggatgctgttgttggggattcaaaagct
caaatccaactgaagaaaatacaatcgtcagtcattctgctgtactgttcgaaagacgaa
gccatttttatactggaggaagcccgttcactgggccttacaggctatggtttcatctgg
attgtgcccagtttggtaacaggtaacacagacaacataccagaggcattcccagctggg
ttaatttccgtatcatatgatgagtgggactacagccttacagaaagggtgatggatggt
gttggggtcataacaacagctgcttctgccatgatggaacaatatggatacattccggaa
gcaaaaacaagttgctacggccaattggagaagaaagttcttccattcctttcactgcac
aagtttatgatgaatgtcacctggaatggcaaagacctctccttcacacgagatggatac
caggccaaccctaagcttgtggtgattgtactaaacaaggaacgcacctgggaaaaggtt
ggaaagtgggaaaaccatagtctagcactaaaatatccagtgtggccaagatttaactcc
ttcgcagatagtgaagtagatgacaaccacctaactatcgtcactttggaggaaaccccg
tttgtcattgtggaggacgtggataagttgactggaacctgtgcgagaagcaatgtgcca
tgcaggaaaaatgtcaaagctgtcaattccactgacaaggggatctatgtgaagaaatgc
tgcaaaggattttgcatcgacatattgaagaagcttgcaaaggctgtgaaattcacgtat
gatctgtacctggtgtcaaacgggaagcatggcaaaaaaatcaatggtgtatggaatgga
ttggttggtgatgtgatgtatcaaagagcagctatggctgttggttcactgaccattaat
gaggagagatctgaagttgttgacttttcggtaccgtttgtggaaacaggaatcagtgtc
atggtatctcggagcaatggcacagtttccccctctgcgtttttagagcccttcagtgct
gctgtgtgggtcatgatgtttgtcacgttgctcattgtgtctgctattgcagtttttgca
tttgagtacttcagcccagtcgggtataacaggaatttggcaaaaggcagagctccacat
ggtccatcattcacaattggcaaagcaatatggctcctttggggcttagtcttcaataat
tctgtgcctgtagagaatcctagaggaacaactagtaaaataattgtctcagtatgggca
ttctttgctgtgatatttctggccagctacactgccaacctggctgcttttatgatccag
gaggagtttgtggaccaagtgactggactcagtgacaaaaagtttcagaggccatatgac
cattcgccaccttttcgatttggcactgttccaaatggcagcactgagagaaatattcga
aataattaccctgatatgcatgcctatatgtccaagtacaaccagaaaggagtgcaagat
gctttggtcagcttgaagactggaaagttggatgcattcatatatgatgcagccgtgctc
aattacatggcaggaagagatgaaggctgcaagcttgtaacaatcggcagtggatacgtc
ttttcaaccactggttatggaatagctttgcagaaaagctcgccttggaaacgtcagatt
gacctggccctcctgcagtttgttggtgatggtgaaatggaagagctggagagtttgtgg
ctgactggaatctgtcacaatgagaagaatgaagtcatgagcagccagttggatgttgac
aacatggcaggcgtgttttacatgctggctgctgctatggctttaagcctgatcaccttt
gtgtgggagcattggttctactggagcctaaggcactgtttcatgggaacctgtactgga
aaaccaggccttctcttctcaatcagcaggggtatctggagctgtatacacggtgttcca
tacgaggaaaagaaaaaatcgcccaacctggatttgaacagccctcaaacaaatattctg
aggctgtttaacacggcaaaaacaatggccaatatgtcaaatctgaatgcttcaagagca
aactccccgaaaagaacttccaatttcattcaaaaagggtctttgctgcttgatgtggtt
gaccaaaagggaaatttcctgtactctgataacaggccctatcaacccaaggagactggc
ttcactgataacaccagcgaaatgatgacatttaatgtcaacaggcagaaagataaccgt
aacaattatatactccaagggcagcatccgttgactctaaatgaagcaaatcccaacact
gtggaggttgcagttagctctgatactcctaaacttaactccaggcctaggcagctgtgg
aaaaaatctgtggaaacgttgcggcaaaatcaggggtcgctagtagaaagtgtcaatgta
gagcccaagcaacccgttaaaaaccagaggtaccttccagaggatgttgtccattcagac
atgtctgattgttcaagccgcactacatcctacaaggatcctgacaacaatcagaagtat
cacaaacataaagagaccttcaaaaagaaatccatgatggccaagtatcctcgagactgc
agtgaaatagaactctcttatcttagagcaaaggagagccagcaacaccatcgtgacaaa
gtctacaccattgattctgaccgggagtccagttatcattcggatcagcatcattaccga
gaaaatgtagcaattccagagggtctggactaccctcaggtgtatcatgatcagaatgag
aattacaggaaacaggaagcagttctgcacgtaaacaggactcctcagcataatgaggac
aaccttaccaatgctgaaaataaatacagcctctataataagcactacagcttgaaggag
aaaaatctttcccctgtcgattacaatgataggtacaagcagcccatcgctcactgcaga
agctgcctctccaaactgcccaactacacccctcactactcggtcaggtctccatataac
agatgtgatgcttgtgtacacacagcaaacttgtatgatattagtgaagatcacatgtta
caagagccagtaagctccatgtgccctgaagaatcctttgtccaccactgggtgggttct
gaagcctcgaacatgcagaaagtaaataggctgaggattagcagacagcattcatttgac
aatatccttgagaaccctaaagaagtggatcttggaagacctgcacgaagtgtaagctta
aaagaaaaggacaaatttcaggatgacccttatgcacatgtattcgatattaagccagag
aaactctttagcaccaaggtttctgtttttgaccataatctggaagagaccaaacggagt
aaatcattgtatccagaccatgtctctgagaatccattttggcattcctttcgtgaagat
cagcatttggtccacggtcgaagttcttctgacatatataaacaatcggctgcatcaaag
atagggctgactggcctttcctactatctgatggcaaaggagcaacagaaaagagataca
tgttga
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