Rhincodon typus (whale shark): 109915865
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Entry
109915865 CDS
T06055
Symbol
b3gnt5a
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rtp01100
Metabolic pathways
Module
rtp_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
rtp_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109915865 (b3gnt5a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109915865 (b3gnt5a)
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
109915865 (b3gnt5a)
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
109915865 (b3gnt5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
109915865
NCBI-ProteinID:
XP_020371130
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All DBs
Position
13:29907084..29908457
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AA seq
378 aa
AA seq
DB search
MITVNRRGRKRQFLQLIFTCFFFSLVLLYWEQLDANVISHVKSYSYRYLINRYSFLNDSL
TLNKEIAVSLHSYQNLITHANKCQNQDVLLLLFVKTSPENRPRRDAIRETWGNEHYIYSE
FKATIKVIFVLGVYKDPSQRNVIQSRLLVEDLQHADLIQQDFYDDFYNLTLKLIFQFKWA
NNFCKNAKFVMSSDDDVFVHTPNLVKYLLQLDKGISNFWIGRVHKGAPPVRNKKSKYYVS
YEMYQWPAYPDYTAGAAYVVSQDVAAKVYEALMTLNSSLYIDDVFMGICAKKMGVEPQQH
MYFAGEGKAPYHPCIYNQMMTSHDHVKDIRHLWQEATDSKVTSLTSGFWGELYCRLVKMF
LLCKPYYVDTYPCSAAFS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgattactgtgaacagaagaggaagaaaacgtcagtttctgcaattaatttttacatgt
tttttcttctctcttgtcctcctttattgggagcaactggatgcaaatgtcattagtcat
gtgaaatcttattcatacagatatctcatcaatagatacagttttttgaatgatagcctg
actttgaacaaggagatagcagttagccttcatagctaccagaacttgataacccatgca
aacaaatgccaaaatcaagatgtgttgcttcttttgtttgtgaagacatctcctgaaaac
cgtcctcggcgggatgctatccgtgagacatggggcaatgaacactatatatattcggag
ttcaaagccactataaaagtgatatttgttttgggtgtatataaagatccctcccagcgc
aatgttatacagagtagattactggtggaagatttacaacatgcagaccttatccagcag
gatttttatgatgacttttacaatcttacattgaaactaatcttccagttcaagtgggca
aataatttctgcaaaaatgctaaatttgtcatgtcttctgacgatgatgtttttgtacac
actccaaatttagtaaaatacctcttacagctggataaagggataagtaatttctggatt
ggtcgagtacacaaaggtgcaccccctgtaaggaacaaaaaaagcaaatactatgtttcc
tatgaaatgtaccagtggcctgcttatcctgactatactgcaggtgctgcatatgttgtg
tcccaggatgtggcagcaaaagtttatgaggccttaatgaccctaaacagcagtctttac
attgatgatgtttttatgggtatatgtgccaaaaaaatgggagtagaaccacaacaacat
atgtattttgctggtgaaggaaaagccccttaccatccttgtatttataatcaaatgatg
acttctcatgaccatgtgaaagatatccgtcatttgtggcaagaggcgacagattcaaaa
gtgacttctctcacctctggattttggggggagctttactgtcggctggtcaaaatgttt
cttctctgcaaaccatactatgtagatacatatccttgcagtgctgcattttcctaa
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