Rhincodon typus (whale shark): 109915932
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Entry
109915932 CDS
T06055
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00310
Lysine degradation
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109915932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109915932
03036 Chromosome and associated proteins [BR:
rtp03036
]
109915932
Enzymes [BR:
rtp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
109915932
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109915932
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
109915932
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109915932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
KRAB
SET
zf_PR_Knuckle
FOG1-like_PR
Herpes_ORF11
Fibritin_C
CYTL1
Motif
Other DBs
NCBI-GeneID:
109915932
NCBI-ProteinID:
XP_048476546
LinkDB
All DBs
Position
47:complement(7476607..7504182)
Genome browser
AA seq
469 aa
AA seq
DB search
MIIDGHLHVADITYKSQLTKIKDQFKDIAVHFSKDEWAELSEWEKTRYKNVKRNYEAMLA
IGLNVPKPAFMSRHGRGSQSCVYESSDSDEDWTPKCLVKNPPQVRTFKPPFKNDGIKKTK
KENSKKIEKVQLAIASHLQEDKDSGYRSFNEDAASAMEETVSVKKINRETAMSECEAQQE
SIKVVCTGKMLESSTEETCNKKEERRYSLRNKERKVYTEERELCDEDFLFCEDCETFFVE
ECPVHGPPVFIKDTVVEFNRPERARLTLPEGLNIAISKIRKAGLGVWNEGKIIPKGVHFG
PYEGVTSNEESAAVSGYSWVISKGKQDFEYIDAKDESKSNWMRFVNCARKEEEQNLVAFQ
HHGKIYYRTCKPVPPRCELLVWYGDEYAKELGIKWTAMWTMKQNPKDRLFTVTKVHEEIS
AFSSLMEEDSSVTTTQSDILRISKSFCVRLHDTKPTDCSWDIPGGRTTQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatcatagatgggcatctccatgtggctgacataacgtacaagagtcagttaaccaag
attaaagatcaatttaaagacattgccgttcatttttccaaagatgagtgggcagagtta
agtgaatgggaaaagacacgttataagaatgtgaagcggaactatgaggccatgcttgca
ataggattgaatgtaccaaagccagcattcatgtctagacatggcaggggtagtcaatct
tgtgtgtatgaatctagtgattcagatgaagattggactcctaaatgtcttgtgaaaaac
ccaccacaggtgagaacctttaagccacctttcaagaatgatggaatcaagaagacaaag
aaagagaacagcaaaaagattgagaaagtacaattagcgattgcatcccatttacaggag
gataaagattcaggttacaggagcttcaatgaggatgctgcctcagctatggaagagacc
gtttcagttaaaaagatcaacagagaaactgcgatgagtgaatgtgaggctcaacaagaa
tccattaaagttgtctgtactggaaagatgttggaatcttcaactgaggaaacgtgcaat
aaaaaggaagagagaagatacagtttgagaaataaagagagaaaggtttacactgaagaa
agagaactttgtgatgaagattttctgttttgtgaagactgcgagacattttttgttgaa
gagtgccctgtgcatggtcctccagtgttcataaaggacacagttgtcgaattcaatcga
ccagaacgagcacgtttaacccttccagagggcctcaatattgcaatatcaaaaattaga
aaggctggtcttggtgtgtggaatgaaggaaagattattcctaaaggagttcattttgga
ccctatgaaggagtcacatcaaatgaagaatcagctgctgtcagtggctattcatgggtg
atcagtaaaggaaagcaagattttgaatacattgatgcaaaggatgaatctaaatcaaat
tggatgagatttgttaactgtgccagaaaagaagaggaacagaaccttgtagcctttcag
caccacggcaaaatttattacaggacctgcaagcctgtcccccctcggtgtgagctcctg
gtctggtatggtgatgaatacgccaaggagcttggaatcaaatggacggcaatgtggaca
atgaaacaaaatccaaaagaccggttgtttactgtgacaaaggtgcacgaggagatctct
gcattcagcagcctgatggaagaagatagctcggtaacaacaactcagtctgacatcctg
aggatcagcaagtccttttgtgtcagactgcatgacacaaaacccacagattgttcctgg
gacatacctggaggacgaacaactcagtga
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