KEGG   Rhincodon typus (whale shark): 109917086
Entry
109917086         CDS       T06055                                 
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp00052  Galactose metabolism
rtp00510  N-Glycan biosynthesis
rtp00513  Various types of N-glycan biosynthesis
rtp00514  Other types of O-glycan biosynthesis
rtp00515  Mannose type O-glycan biosynthesis
rtp00533  Glycosaminoglycan biosynthesis - keratan sulfate
rtp00601  Glycosphingolipid biosynthesis - lacto and neolacto series
rtp01100  Metabolic pathways
Module
rtp_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    109917086
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    109917086
   00513 Various types of N-glycan biosynthesis
    109917086
   00515 Mannose type O-glycan biosynthesis
    109917086
   00514 Other types of O-glycan biosynthesis
    109917086
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    109917086
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    109917086
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rtp01003]
    109917086
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109917086
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109917086
Enzymes [BR:rtp01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     109917086
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     109917086
    2.4.1.90  N-acetyllactosamine synthase
     109917086
Glycosyltransferases [BR:rtp01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   109917086
Membrane trafficking [BR:rtp04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    109917086
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   109917086
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C Peptidase_C21
Other DBs
NCBI-GeneID: 109917086
NCBI-ProteinID: XP_020372452
LinkDB
Position
3:complement(6269307..6313716)
AA seq 362 aa
MALSSVMPGRGLHVTCLAVMVLSGVHLTVTLLYYLDMHVYSGQMVRRFGSFLVADRIDTE
AGTVPVPNTTNANGSVESPSPSRPPLQPCPDTSPHLVGPLAIEFSQTVDLEDVKNTNPLL
REGGRFAPVDCTALQKVAIIIPFRNRFEHLKYWLFYLHPILQRQQLDYGVYIINQHGEDT
FNRAKLLNVGFMEALKEYDYNCFVFSDVDLIPMDDRNIYRCYSQPRHLAVSMDKFGFRLP
YNQYFGGISALSREQHEKINGFPNDYWGWGGEDDDIYNRIIFKGMKISRPSGGIGKCRMI
RHNRDKNNAPNPQRFNRISKTRQTMEHDGLNSLKYTVLEVKKYPLYTFIDVDIGGPGRPP
SR
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggcgctgagttcggtgatgccgggccgtgggctccatgtgacgtgcctagcggtgatg
gtgctgagcggggttcacctcactgttaccctgctctactacctggacatgcacgtctac
agcgggcagatggtgcggcgcttcggcagcttcctggtggcggataggatcgacacagag
gcgggcacggtcccggtccccaacaccacaaacgccaacggcagcgtcgagtccccgtct
ccctctcgcccgccgttacagccgtgtccggacacttcaccgcatctcgtgggaccactt
gcaatagaattttctcagactgttgatctagaagatgtgaaaaatactaatccattgtta
agggaaggaggcagatttgctccagtagactgtacagctcttcagaaagttgccatcatc
attccttttcgcaatcgatttgagcatttgaagtattggttgttttacttgcatccaatt
cttcagcgccagcaactggattatggggtgtatatcattaaccagcatggagaagatact
tttaatcgtgccaaacttctcaacgtaggttttatggaagctttgaaagaatacgactac
aactgctttgtattcagtgatgttgatttgattcccatggatgatcgaaatatatacagg
tgttacagccaaccaaggcacctggctgtatcaatggataaatttggtttcagattaccg
tataaccagtactttggaggaatatcagctttaagtagagaacagcatgaaaaaattaat
ggattccctaatgattactggggctggggaggagaagacgatgacatctacaacaggata
attttcaaaggcatgaagatttctcgtccaagtggtggcattgggaaatgccgtatgata
agacataacagagataaaaataatgcacctaaccctcagaggtttaacagaatttctaaa
acaagacagacaatggaacatgatggtttaaattcactcaagtacacggtgttagaggtc
aagaaatatcccttatacacctttattgatgtggatatcggtgggcctggaagaccacct
tcaagataa

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