Rhincodon typus (whale shark): 109920023
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Entry
109920023 CDS
T06055
Name
(RefSeq) sialidase-3-like
KO
K12357
sialidase-2/3/4 [EC:
3.2.1.18
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00511
Other glycan degradation
rtp00600
Sphingolipid metabolism
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
109920023
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
109920023
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
109920023
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
Motif
Other DBs
NCBI-GeneID:
109920023
NCBI-ProteinID:
XP_020375631
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Position
6:complement(1930742..1939086)
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AA seq
416 aa
AA seq
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MQKIDSFSIFNVVGAVIMPADQLPSRTILFEKGKETVYRIPSLLYLKEHNIFLAFAEERM
SFQDVDAKLLVMRKGSFIGGSVKWEDMVPLKTAMLPGYRTMNPCLVYERKRGVIYLFFIC
VKDGVTEEQQIWWGKNWARLCYVLSQDAGHSWTELTDLTDTVLGSQLCKWATFAVGPGHG
LQTQQGRLIVPAYAYIICRRCCLIPPKYFTHPHSFYIFSDDSGDNWKLAEPITKYQALEC
ELAEITITDSHHLLYCNARTRGHHRMEAVSLDPGHFEIVRLAKGLPESKAGCQGSVASFR
LPNPVTIPFRRSTIRKTDTEVKMSWLLYTHPAGKSCCFFHKRNRTNLGVYINLMPLKPKG
WYGPWIIQAGPSGYSDLVYLDGMGTFACLYECGISKFWEQIAFCLFSISEVLENIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatagattctttctccatttttaatgttgtaggggcagtaattatgccagct
gaccaacttccgagccgaacgattttgtttgagaaggggaaggagactgtataccgcatc
ccctcactcctctacctcaaggagcacaacatttttttagcctttgcagaggaacgaatg
tcattccaggatgtggatgcaaagcttctggtgatgaggaagggctcgtttatcggagga
tcagtgaagtgggaggacatggtaccactgaagacggctatgctgcctgggtatcggaca
atgaacccatgcctggtgtatgagcggaaacgtggagtgatttacttgttcttcatctgt
gtcaaagacggtgtcacggaggagcagcagatctggtggggcaaaaactgggccaggctg
tgctacgtgctgagccaagatgctggacatagttggacagagctgacggacctgaccgac
acggtcctcggcagccagctctgcaaatgggccaccttcgcggtgggacccggtcacggt
ttgcaaacacagcaagggaggctcatagtccctgcctatgcctacatcatctgccggagg
tgctgtctgatcccacctaagtacttcacacacccccactctttctatatcttcagtgac
gacagtggagacaactggaagctagcagaaccaataactaagtaccaggcactggagtgt
gagctggcagagatcaccatcactgacagccaccatctgctgtactgcaatgcccgaaca
cgcgggcatcacagaatggaagcagtgagcctagaccctggccactttgaaattgtccgc
ttggccaagggactgccagaatcgaaggccggttgtcaggggagtgtggcgagtttccgt
ctcccaaacccagtcactattccattcagaaggtcaacaattagaaagactgacacagag
gtcaagatgtcctggctcctatatacacacccagcagggaaatcctgctgtttctttcac
aaacgcaatcggactaacctgggtgtttacatcaatctgatgcccctgaaacctaaaggt
tggtatggaccctggatcatccaggctgggcccagtggttactctgaccttgtgtacctt
gatgggatgggaacctttgcttgtctgtatgagtgtggtatctcaaagttctgggaacaa
attgctttctgtcttttcagcatcagtgaggtattggaaaatatcttttag
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