Rhincodon typus (whale shark): 109921647
Help
Entry
109921647 CDS
T06055
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
109921647 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109921647 (mmp2)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
109921647 (mmp2)
Peptidases and inhibitors [BR:
rtp01002
]
Metallo peptidases
Family M10
109921647 (mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_4
Reprolysin_5
Reprolysin_3
DUF4953
Motif
Other DBs
NCBI-GeneID:
109921647
NCBI-ProteinID:
XP_020377267
LinkDB
All DBs
Position
15:42930099..42958486
Genome browser
AA seq
657 aa
AA seq
DB search
MTMKTSGNFYRLVLKVTLLQIIWVQQTLAAPTGIIKFPGDNSTKTDKEIATLYLNKFYGC
PKERCDLVVLSDTLKKMQKFFGLPQTGELDSETVSVMKKPRCGVPDVANYNFFPQMPKWE
NKQITYRILGYTYDLDSETVDDAFARAFQVWADVTPLSFSRVFDGEADIMINFGRWEHGD
GYPFDGKDGLLAHAFAPSTGIGGDSHFDDDEFWTLGEGRVVKTKFGNAEGEFCKFPFLFN
EKEYHSCTTEGRSDGFPWCSTTYNFDADAKYGFCPHELLFTMGGNAGGEPCSFPFTFEGR
QFDSCTTEGRSDGYRWCSTTSNYDTDRKYGFCPDQALSTIGGNSDGSPCVFPFTFLRKPY
DSCTSNGRNDGLLWCATTGSYDDDSKWGFCPDSGYSLFLVAAHEFGHALGLEHSQDPGAL
MAPIYTYTKNFRLSNDDILGIQKLYGAPTDKPLPPTQGPVTPMNLCEDTLIFDGVTQIRG
EIFFFKDRFLWRTRNPRSKPLGPMLVATYWTDLPEKIDAVYQEPLTDKAVFFSGDEHWLY
TASDLEKGYPKKISTLGLPDDLPRIDAVFNWKKNKKTYIFAGEKFWRYNEVKKKMDPGFP
KLIADAWNGIPDNLDGALESLENGHTYFFKDWYYLQMEDQSLKIIKVGNVKTDWLGC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaaaacaagcggcaacttttatcgcttagtcttaaaagtaaccttgctccag
atcatctgggtccagcagactttagcggcaccgactggcataatcaagtttccaggtgat
aacagcacgaagacagacaaggaaatagccactttatatttgaataaattctatggctgc
ccaaaagaaaggtgtgatcttgtggtgctgtcagacacactgaagaagatgcagaaattt
tttggattgccacaaactggagaactggacagtgagacagtaagtgtgatgaagaaaccg
cggtgcggagttcctgacgtggccaattacaacttcttcccacagatgcccaaatgggag
aataagcaaataacttataggattttgggatacacttacgatctggactctgagacagtg
gatgatgcttttgctcgggcctttcaggtatgggctgacgtcacaccactgtcattttca
agggtcttcgatggagaggcggacatcatgatcaactttggccgttgggagcatggtgat
ggatatccatttgatgggaaggatgggctgctagcacatgcttttgccccatcaacagga
attggtggtgattctcattttgatgatgatgaattctggacgttgggtgaaggacgagtt
gttaagacaaaatttggaaatgcagaaggggaattttgtaaatttccttttctgtttaat
gagaaggaataccatagttgtactacagaaggccgtagcgacggcttcccatggtgttcc
acaacttataattttgatgcagatgcaaaatatggattctgtcctcatgaactgcttttt
acgatgggaggaaatgctggtggagagccatgctcatttcctttcacctttgaaggcagg
cagttcgatagctgcacaacggaaggaagatcagatggctaccggtggtgtagtacaacc
agcaattatgacacagacagaaaatacggcttctgcccagaccaagccctgtcaacaatt
ggaggaaactcagatggttcaccttgtgtatttcctttcactttccttcggaaaccatat
gattcttgcacaagtaatggacgtaatgatggcctgttgtggtgtgcaaccactggaagc
tatgatgatgatagcaagtggggcttctgccctgacagtggttacagtcttttccttgtt
gctgctcatgagtttggtcatgcacttggtctggagcattcccaagatcctggagctcta
atggccccaatctacacctacaccaaaaacttcaggctttcaaacgatgatattctcggc
attcaaaagctttatggtgcaccgactgataaacccttgccaccaacacagggccctgtc
actcctatgaacctttgtgaggacaccttgatttttgatggagttacgcaaatcagagga
gaaattttcttctttaaagatcggttcttgtggagaaccagaaatccccggtccaaaccc
ctgggaccaatgctagtagctacttactggactgatctgcctgaaaaaattgatgctgtc
tatcaggagcctttaactgacaaggctgtattcttttcaggagatgagcactggctttat
actgccagtgacctggagaaaggatatcccaagaaaatctccacacttgggctaccagat
gatttgccacgtattgatgcagtttttaactggaagaaaaacaagaagacttacatcttt
gcaggtgaaaagttttggagatacaatgaagtgaagaaaaaaatggatcctggattccct
aagctaattgcagatgcctggaatggcattccagataatttggatggtgcccttgagtct
cttgagaatggacacacctactttttcaaggattggtactacctccaaatggaagaccag
agcttgaagattattaaagtaggaaatgtgaaaactgactggctcggttgttag
DBGET
integrated database retrieval system
