Rhincodon typus (whale shark): 109923471
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Entry
109923471 CDS
T06055
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
109923471 (gpcpd1)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
109923471 (gpcpd1)
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Motif
Pfam:
GDPD
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
109923471
NCBI-ProteinID:
XP_048456934
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Position
9:10222905..10266565
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AA seq
506 aa
AA seq
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MPNTLEISLISDSGYKSRHSQPECGYALELGQWMEYSIQTLEPDNLELIFDFFEEELGVA
VVQGDALPGLVGTACLLSSTIVEKSSGVITLPIMSRNSRQTIGKVKVDYLVIKPLEGYIC
DMSPSLSKYWKPRMALDVGHRGAGNTSSANLAKVRENTIASFKNAASHGAAFVEFDVHLS
KDHVPIVYHDLTCCILMKKKMDKESSELFEIPVKELTFEQLQLLKLAHVAALKVNGDKEN
SMDDENDASENQPFPSLQQVLECVPEHIGFNIEIKWPYQQKDGTWEGNLPTYLDMNEAID
VILKCTLENASKRRIVFSSFVADVCSLIRQKQNKYPVLFLTQGYSNIYPELMDLRCRSTP
IAMSFAQSENILGINVHTEDLLRNLDYIQQAKSRDLVIFCWGDDTNESENRSILKKSGID
GLIYDKICDFVLGQTNIFQVEEFEELKQQLTEEVFVNCSCPDDSHFDCQSTPVNNFNGNS
YPSEIKSCEQEAFSAESDSGQSCSSF
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatactttagaaatctccttaatcagtgacagtggatacaaatcccgtcactca
cagccagagtgtggatatgccttagaacttggtcagtggatggagtatagcattcagacc
ctggagccagataacctggaactaatttttgacttctttgaggaagagctgggtgtagca
gtagtacaaggtgatgcacttcctggacttgttggaacagcctgtcttctgtcctcaaca
attgtggaaaagtccagtggagttatcacacttccgatcatgagtagaaattctagacaa
actattggaaaagtgaaagttgactaccttgttattaaacccttggaaggctatatttgt
gacatgtctccttcattgtccaagtattggaaacccagaatggctttagacgttgggcac
agaggtgctggaaatacatcatctgcaaacctcgcaaaagttcgagaaaacacaatagcc
tccttcaaaaatgccgccagtcacggtgctgcctttgtagagtttgatgtccatctttca
aaagaccatgttcccattgtgtaccatgatctcacttgttgtatattaatgaaaaagaaa
atggacaaagaatcttcagaactatttgaaattccagtaaaggaacttacgtttgagcag
ttgcagctactaaagttggcacatgtggctgctttgaaggtgaatggcgataaagaaaat
tcaatggatgatgaaaatgacgcttcagaaaatcaaccatttccttccttgcagcaggtt
ttagaatgtgtgcctgaacatattggatttaacattgaaattaaatggccttatcaacaa
aaggatggtacctgggagggcaatttgccaacttatttggacatgaatgaagctattgat
gtaatcctaaaatgcactttggaaaatgcatctaagcgaagaatagtgttctcctcattt
gttgcagatgtctgttcactgatcaggcagaagcaaaacaagtatccagttcttttcttg
actcaaggttattctaacatctatcctgagcttatggatctccgctgccgaagcacacca
attgcaatgagttttgcacagtcagaaaacattctgggaatcaatgttcacacagaggac
ttgctacgaaacctggattatatccagcaagccaagtcaagagatttggtcattttttgt
tggggtgatgatactaatgagtctgaaaacaggagcatactgaagaagagtggaattgat
gggctcatctatgataagatctgtgactttgtactgggacagacaaatatcttccaagta
gaggaatttgaggaactgaaacaacaattaacagaggaagtatttgtcaattgctcatgt
cctgatgacagccattttgattgtcagtcaactccggtgaacaatttcaatgggaacagt
tatccaagtgaaataaaaagctgtgagcaggaagcattcagtgcagaatctgactcaggg
caaagttgtagttcattttga
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