Rhincodon typus (whale shark): 109928274
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Entry
109928274 CDS
T06055
Name
(RefSeq) hyaluronidase-4-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00531
Glycosaminoglycan degradation
rtp01100
Metabolic pathways
rtp04142
Lysosome
Module
rtp_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
109928274
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109928274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
rtp02042
]
109928274
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109928274
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtp00537
]
109928274
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
109928274
Bacterial toxins [BR:
rtp02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
109928274
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Heparan sulfate / Heparin
Enzymes
109928274
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rtp00537
]
Enzymes
109928274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
NgoMIV_restric
XRN1_D1
Motif
Other DBs
NCBI-GeneID:
109928274
NCBI-ProteinID:
XP_048462650
LinkDB
All DBs
Position
16:complement(13594848..13605142)
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AA seq
323 aa
AA seq
DB search
MLSGLTLLACFLFYLSTHPAIIWGNEFKPAAASPIIHNKPFIVVWNTPTAGCKTKFDVDL
DLSVFDIVENANETFVGKNITIFYKNKLGLYPYYTSERVPVNGGLVQNTSLSNHLKVTSD
DISTVLDKDFHGLAVIDWEEWRPLWERNWGLLHIYKEKSAELVRSKYPYLPESKILQIAK
EEFENAAQDFMKQTLKLGQTLRPKGHWGYYKFPDCYNYFKENEANNYTGHCKKEDIPRNN
ELAWLWKASRCLYPSIYIPEKLKSSNNAQKFVHYKIKEALRVAALDSANDALPVLVYSKY
SYIKRLDFLTEVSKTLFQNKSNG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaggtctcacactactcgcatgtttcctattttatctctctacccatccagct
atcatctggggaaatgaatttaagccagcagcagcctcgccgattatccacaataagcca
tttattgtggtttggaacacacctacagcggggtgtaaaacaaaatttgatgttgatttg
gatctgagcgtctttgatattgttgaaaatgcaaatgagacctttgttggaaagaatatc
accatattttacaaaaacaaattaggactttacccatactacaccagtgagagggttcca
gtaaatggtggtcttgtgcagaacaccagtctgtccaaccacctcaaagtaacttcagat
gacatttccactgtactggataaagacttccatgggctcgcagtgatagattgggaagag
tggcgaccactttgggaacgtaactggggccttctgcatatctacaaggaaaagtccgca
gaactagtaagaagcaaatacccctatttaccagaaagtaagattctccagattgccaaa
gaggaatttgaaaatgctgcacaagattttatgaagcaaacattaaaactaggacagact
ctgagaccaaagggtcactggggctattacaaatttccagactgctataattactttaaa
gaaaatgaagctaacaattacacaggtcattgcaaaaaggaagatatccctagaaataac
gagttagcatggctctggaaggcatcgcgatgcctttatccaagtatctacatccctgag
aagctaaaatcctcaaataatgctcaaaagtttgttcactacaagattaaggaggctctc
cgtgttgctgcccttgattcagccaatgatgctctgcctgttttggtttactccaaatac
tcatacataaaaagacttgacttcctgactgaggtaagcaagacattgttccaaaataag
tcaaatggctga
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