Rhincodon typus (whale shark): 109930014
Help
Entry
109930014 CDS
T06055
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X2
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtp03016
]
109930014 (trdmt1)
Enzymes [BR:
rtp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
109930014 (trdmt1)
Transfer RNA biogenesis [BR:
rtp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
109930014 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
109930014
NCBI-ProteinID:
XP_020385141
LinkDB
All DBs
Position
2:42917474..42984694
Genome browser
AA seq
403 aa
AA seq
DB search
MMEAAQAQLRVLELYSGIGGMHYALKESYTTAKVVAAVDINTIANEVYKHNFPNTYLCPK
TIEGMTLDEFNKLDFDMILMSPPCQPFTRIGSQKDVLDPRTKSLLHILDILPRLSKAPKY
ILLENVKGFESSVARDKLIQALESCRYIYQEFLLSPILLGIPNSRLRYFLLAKLQPDAFC
FQTSYQIIECFPDHEVADSRFTDGHSRFDQIVSTGDNKKEHNNSGYCAENDKSETTMTRL
YKLETPEHLKKKQIQNNNLSIQMIQEFLEEELKDPRPYFIPPKTLLRYALILDIVGQSCR
RSVCFTKGYGHYAEGTGSVLKTAPDVQLSEVFQSFQTLSEDEKLSRLSKLKLRYFTPREI
ANLHGFPPEFSFPETISLRQSYRLLGNSLNIKVVAKLISLMVE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggcggctcaggcccagctgagggtgttggagctgtacagcggtatcgggggt
atgcactatgcgttgaaagaaagttacacaactgcaaaagttgttgctgcggttgacatc
aatactattgccaatgaagtttacaagcacaactttcctaacacctatctctgtcccaag
acaattgaaggtatgacattggacgaattcaataaactggactttgacatgatcctaatg
agtcctccttgccagccattcacaagaataggttcacagaaagatgtattggatcccagg
accaagagccttttgcacatccttgacattcttccaaggctttccaaagcccctaaatat
attcttctagaaaacgtcaaaggatttgaatcatctgttgctagagataaattaatacaa
gcactggagagctgcagatatatttaccaggaattccttctatcaccaatcttgttgggc
atcccaaactcgagactgcgatattttcttcttgcaaagctccaacctgacgctttctgc
ttccaaacttcttatcagataatagaatgtttcccagatcatgaagttgcagattcaaga
ttcacagatggtcattctagatttgatcagatagtatccacaggtgataacaaaaaggaa
cacaacaactcgggatattgtgccgagaatgacaaaagtgaaacaactatgactcgactt
tacaaattagagacgccagaacacctgaaaaagaagcaaatccagaacaataatttgtca
atccaaatgatccaagaattcttggaggaggaattgaaggatccaaggccatacttcata
cccccaaagaccttactgcgttatgctttgatactagacatagttggacagtcttgtaga
agatcagtgtgtttcactaaaggatatggccattatgctgaaggtactggttcagtgttg
aagactgcaccagatgttcagctttctgaagtcttccagtcatttcagacactgtcagag
gatgaaaagttgtctcggctatcaaaactaaaactgcgatatttcactccgagggaaata
gcaaatcttcatggatttcctccagaattcagttttcctgagactatttcgctgagacaa
agttaccgtctgcttggaaacagcctcaatatcaaagtggtagccaagctcattagcttg
atggttgaatga
DBGET
integrated database retrieval system
