Rhincodon typus (whale shark): 109936348
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Entry
109936348 CDS
T06055
Name
(RefSeq) cell migration-inducing and hyaluronan-binding protein
KO
K19031
cell migration-inducing and hyaluronan-binding protein [EC:
3.2.1.35
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rtp00536
]
109936348
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
109936348
Glycosaminoglycan binding proteins [BR:
rtp00536
]
Hyaluronan
Cell surface receptors
109936348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ILEI
G8
Mucin2_WxxW
Beta_helix
Kre9_KNH
Motif
Other DBs
NCBI-GeneID:
109936348
NCBI-ProteinID:
XP_020390553
LinkDB
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Position
33:3870358..4086291
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AA seq
1354 aa
AA seq
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MMMMSHLLYNVGCLLILNLPALFAACPDQDPDLHLWNPGHNKEHRVNIGHNRKLLLSSSA
TVHSIRIVDGGKLVISDGNEETIILRTRSILIEDGGELHIGSEDCPFQNDVTIILYGRSD
EETEELHSYFGLKYIGVSRGGTLELHGAHKLSWTFLNSTLHPGGMSEGGYYFERSWGHRG
IIVHVINQIGEVVHSDRFDTYKSKAESKRLAEYLDRVKEGMIISVAVNDEGSTVLDDFAK
NVLSKLGSKYFRHLGFRHPWSFITVKGSPESSAEDHVIYQGARGSAAAKVFKLFHSPHGN
HFTVGSTSEWVQDVEWTDWFNRDDERGSGDWEKLSDLRVAFPGKICESPIDIQVVTVNGI
PASRTGEVFHMHDQDYGFVCRNKDQANGICQNYKVRFLCGKPVRPKVTITIDTHVNSTIL
QLVDDARTWKPGDVIFVASTDYSMHQTEEFQLLHCPECKPNQVKIQGKAKYLHMGTEVDG
VDMRAEVGVLSRNIVIMGEMEDHCYGDNACKFFEFDTVGGHIKMGVGFKAAHIEGVELKH
MGQQSMGHYPIHFHMTGDLDEKGGYNPPTYVKGISIHESFSRCVTIHGSNGLLVKDVIGY
KTLGHCFFTEDGPEERNTFDHCLGLLVKAGTLLPSDRDSKMCRSITEGVYPGYIPKPRQD
CNAVSTFWIANPNNNLINCSAAGSEETGFWFIFHHVPTGPSEGMYSPGYSEHVPLGKFTN
NRAHSNYRAGMMIDNGVKTTEANAKDKRPFLSLVGARYSPHKGADPHKPREPAIIKNYIA
YKNQDHGAWLRGGDVWLENCQFADNGIGLTLASGGTFPDDDGAKQEVKNSLFVGESENRG
TQMADNLVWGPSGLDHSGRALPKGVTFPIRGMQIYDGPINVENCTFRKFAALDGRHTSAI
GFRFNNSWQTCPNNNVTSITFQDVPITSRVFFGEPGPWFHHLDLDGDKTTILHDVDGSVS
EFAGAYIVKHDNWLLRHSDCIDVPDWRSAICSGHYAQIYIQARRPANLKMKMIKDEYFDK
PLYLKGALGKRSHYQQYQPVVMLQKGYTVHWDGPAPQEVTIWLINFNQNDWIRVGFCYPQ
GSTFNIISDIHNRLSKRTFKTGLFLRTQQMDNLDRGHPTRGYYFFDEDTGLLFLKVKAHK
KREAFAFCSSAGCERIKIKASIPKTSKRSDCAMKAYPKYSEIPTVDVPMPQRIPTEQLTT
NDHFLEVKLESYQTRFFHIRQDLAYMDVNGRKFYHADDGMQIVVVDGQSGKVVDNRSFRN
TILRGIPVHVENYVANIKNNSIALITSKGQIISERPWNKVLTQLGATTVKLKDKLAFVGF
KGSFRPEWIKLVVGEEVAKIHEVLPIPVVNKLKL
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgtcacatctactctacaatgttgggtgcctcctcatcctaaacctccct
gcattatttgcagcttgtcctgaccaggacccagatctccacctctggaatcccggccac
aataaggaacatagagtgaacattggacacaatcggaaactgctgttgtcttcttctgct
acagtccattctattcgcatcgttgacggaggaaaactggtcatttctgacggcaatgag
gaaactatcattcttcgtacacggagtattcttattgaagacggtggggaattgcacatt
ggcagtgaagactgcccatttcagaatgatgtcaccatcattttatatggcagatcggat
gaagaaacagaagaacttcacagctactttgggttgaagtatattggagttagtagagga
gggacacttgaacttcatggtgctcacaaactgtcctggacatttctaaatagcaccctc
catcctggtgggatgagtgaaggtggctactactttgaaagaagctggggtcatcgagga
atcatagtgcacgtcattaaccagattggagaggttgtccactcggatagatttgataca
tataaaagcaaagctgaaagtaaacgccttgctgagtacctggacagagtaaaggaaggc
atgatcatttcagtagctgtgaatgacgagggatcaactgttctggatgacttcgccaaa
aatgtgctgtcaaagctggggagcaagtatttcagacacctcggattcaggcatccttgg
agtttcatcacagttaaaggatcacctgagtcttctgctgaagatcacgttatctaccaa
ggagccagaggatctgctgctgcaaaagtgtttaaactattccactcccctcatggcaat
cactttactgttggttcaacaagtgagtgggtacaagatgtggaatggaccgattggttt
aaccgggatgatgagcgaggatcgggagactgggaaaaactgtctgacttgagagttgca
tttcctgggaaaatctgtgagagcccaatcgatattcaggttgttactgttaatggaatc
ccagccagtcgtacaggagaagtgttccatatgcatgatcaagactatggatttgtatgt
cgaaataaggatcaagctaatggaatctgccagaactacaaagtgcgctttctttgtggt
aaaccagtgcggcccaaggtgaccattaccatagatacacatgttaatagcacaattctg
cagctagtggatgatgccagaacttggaagcctggtgatgtcatttttgttgccagcaca
gattattccatgcatcagacagaggaattccaacttctgcactgtccagaatgcaaacct
aaccaggtcaaaatccaaggaaaagcaaagtacttgcacatgggaacggaagtagatggt
gttgacatgcgggctgaagttggagtactgtccaggaatatagtaattatgggagaaatg
gaggatcattgctacggtgataatgcttgcaagttttttgaatttgacacagttggaggg
cacattaagatgggtgtgggtttcaaagcagctcacattgaaggggttgaactcaaacat
atgggccagcagtctatgggccattatcccattcattttcacatgacgggagacctcgat
gagaaaggtggctataaccctccgacctatgtgaagggcatctccattcatgaatctttc
tctcgatgtgtgaccattcatgggtccaatggacttctggtgaaagatgttattggctac
aagaccctagggcattgcttcttcactgaagatggtcctgaggaacgaaatacatttgat
cactgccttggactgttggtcaaagctgggactctgttaccatcggatcgtgacagcaaa
atgtgcaggagcataacagaaggcgtgtatccaggatatatcccaaaacctagacaggac
tgcaatgcagtctccacgttttggatcgcaaatcccaacaataatctcatcaactgctca
gctgcagggtctgaggaaactggattttggtttattttccaccacgtgcccacagggcct
tcagaaggaatgtattcccctggttattctgaacatgtgccattgggaaagttcaccaac
aacagggctcattccaactatagggctggtatgatgattgataatggagtaaaaacaact
gaagctaatgcaaaggacaagaggccattcctctcactggttggtgccaggtacagtccc
cataaaggagctgatcctcataaaccgagggaacctgctataatcaaaaattatattgca
tataaaaaccaggaccacggtgcttggcttcgtggtggagacgtgtggttggagaactgc
caatttgctgataatggaattggactgactcttgcaagtggtggaacctttccagacgat
gatggagccaaacaggaggttaagaattcgttgtttgttggggagagtgaaaaccgtgga
actcagatggcagacaatctcgtctggggacctagtggcctagatcacagtgggcgagct
cttccaaaaggagtgacattccccatccgaggaatgcagatctacgatggcccaatcaat
gtggagaactgcactttccgtaaatttgcagcgctggatggtcgccacacaagtgccatt
gggttccgattcaataactcttggcaaacctgtccaaacaacaatgtgacaagtatcact
ttccaggatgtcccaatcacatcaagagtgttctttggagagccaggtccctggttccat
cacttggatttggatggtgacaagacaactatcctgcatgatgtggatggatcagtgtcg
gagtttgcaggagcttatattgttaaacatgataattggctactcagacattcggattgt
atcgatgtgccagactggagatctgccatctgcagtggtcactatgcacagatatatatt
caggccagacggccagcgaacctgaagatgaaaatgattaaagatgagtactttgataag
ccactgtatttaaagggtgccctgggcaaacgctctcattaccagcaataccagcctgtc
gttatgctgcagaaaggatacactgtgcattgggatggtccagcaccccaggaggttacc
atatggctcatcaacttcaaccagaatgattggatccgagtgggattttgctaccctcaa
ggcagcacatttaacatcatatcagatattcataatcgtctgtcaaaaagaacgttcaag
actgggttgtttctgcggacacagcagatggataacctggatcgtggtcatccaaccagg
ggctattatttcttcgatgaggatactggactactgttcctgaaagtgaaagcccacaaa
aagcgtgaggcatttgctttctgctcctcagcaggctgtgagagaataaagatcaaagct
tccattccaaagaccagcaagcgcagtgactgtgcaatgaaagcttaccccaaatacagc
gagataccaaccgtcgatgtaccaatgccacagcgaatacctacagaacagctgaccacc
aatgatcacttcttggaggtcaagcttgagtcctatcaaaccaggttcttccatatcaga
caggacttagcctacatggatgttaatggaaggaagttttatcatgctgacgatggcatg
cagatcgttgtggtagacggacagtctggaaaggtggtcgataacagaagcttccgaaac
acaatcttgcgaggaattccagtccatgtagagaattacgtggcaaacataaagaacaac
tccatcgctctgataacatctaaaggacaaatcatttcagaaagaccttggaacaaagtt
ctgacccaacttggagccaccactgttaaactaaaggataaactggcatttgtgggattt
aaaggaagtttccggcctgagtggataaaacttgtcgttggtgaagaggtagcgaaaatt
catgaggttctcccaattcctgttgtaaacaagttgaaactatga
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