Rhizobium tropici: RTCIAT899_CH15330
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Entry
RTCIAT899_CH15330 CDS
T02432
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00260
Glycine, serine and threonine metabolism
rtr01100
Metabolic pathways
Module
rtr_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RTCIAT899_CH15330
Enzymes [BR:
rtr01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
RTCIAT899_CH15330
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
RTCIAT899_CH15330
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
DAO
NAD_binding_8
GIDA
AlaDh_PNT_C
HI0933_like
Thi4
Pyr_redox_3
Pyr_redox
Lycopene_cycl
FAD_binding_3
3HCDH_N
Fer2_BFD
Motif
Other DBs
NCBI-ProteinID:
AGB72439
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All DBs
Position
complement(3089889..3092885)
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AA seq
998 aa
AA seq
DB search
MSGANRIAGKGRLTPARTARFTFDGKTYTALEGDTVASALLANGVHLVGRSFKYHRPRGI
LSAGAEEPNALLDISRDAARRQPNVRASVQEVFDGMKAQSQNRWPSLAFDIGGVNNLMSP
FFAAGFYYKTFMWPKSAWKHIYEPFIRRAAGLGVAPTEEDPDHYAGRYAHCDVLVVGAGV
AGLSAALAAAETGAKVILCDEQPDVGGALRFDTGIKIDGAEGYEWAQATVAKLKAMPNVQ
VLTRTTAFGYYNHNFFGLAERVTDHLAKPGRDLPRERLWQVRAKRAILATGAIERHMVFP
NNDRPGIMLASAARAYLNHYGVAVGAKIGVYTAHDSAYEAAFDLKRAGVSIAAIVDSRAR
PGEAVLAEAKRLGIEVLTDYAVVDTSGKLRVASMTVSRNGSSATRKIPVDALLVSAGWTP
SVHLFSQSRGKLKFDTEKQRFLPGTYVQDCLSVGACNGTDGLQAAIEESLAAGELMARAT
GSTNGGEKIQLHAEQAFEWTGGMIGAAEGAGPDTNAKAFVDFQHDVCAKDIRLAVREGMH
SIEHIKRFTTNGMASDQGKLSNMHGLAIAAEMLGKDIPQVGLTTFRAPYTPVTYGTLISH
SRGALFDPARKTPMHAWEEAHGAIFEDVGNWKRAWFYPRAGETMHQAVNRECRTAREVAG
VFDASTLGKIEVVGPDAAEFLNLLYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLAE
DRFHVTTTTGGAPRVLHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPKAREIIEPLVE
GQDLSNEAFPHMSVAECKVCGVPARLFRVSFTGEVGYEINVPADYGQSVWEAVWARAEPL
GACAYGTETMHVLRAEKGYIIVGQDTDGTVTPDDAGLAWAVSKKKTDFVGIRGLKRQDLV
KEGRKQLVGLVTRDPKVVLEEGAQIVADPNEQKPMAMLGHVTSSYWSENLGRSIAFALVA
GGRERMGKTLYVPMPDKTISVEVTDLVFFDKEGGRING
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgccaatcgtatcgcgggcaaggggcgtttgacgccggccagaaccgctcgc
ttcacttttgacggcaagacctataccgcgctcgagggcgataccgtcgcctcggcgctg
cttgccaacggcgtccatcttgtcggccgttccttcaagtatcaccgtccgcgcggtatc
ctttcggctggagccgaagaaccgaacgcactgctcgatatctcgcgcgatgcggcgcgg
cgacagccgaacgtgcgtgccagcgtgcaggaagttttcgacggcatgaaggctcagtcg
caaaaccgctggccgtcgctcgccttcgatatcggtggcgtcaacaatctgatgtcgccc
ttctttgccgctggcttctactacaagaccttcatgtggccgaagtcggcctggaagcat
atttacgagcccttcatccgccgtgctgccggcctcggcgttgcgccgacggaagaggat
ccggatcactatgccggtcgttacgcccattgcgacgttcttgtcgtgggtgccggcgtc
gccggtctttccgcggcgctcgcggcggctgaaactggcgccaaggtcatcctctgtgac
gaacagccggatgtcggcggcgcgctccgcttcgataccggcatcaagatcgatggcgcc
gaagggtacgagtgggcgcaagcgaccgtcgccaagctcaaggcgatgccgaatgtccag
gtgctgacccgcacgaccgccttcggctattacaaccataatttcttcggccttgccgaa
cgcgtgaccgaccatctggccaaacccggccgcgacttgccgcgcgagcgcctatggcag
gtccgcgccaagcgcgccatcctggcgacaggcgcgatcgaacgccacatggtgtttccg
aacaacgatcgtccgggcatcatgctcgcttcggctgcgcgtgcctatctcaaccactat
ggcgtcgccgtcggtgcgaagatcggcgtctacacggcgcatgattcggcctatgaggcc
gccttcgatctgaagcgcgccggcgtttccatcgctgccatcgtcgacagccgtgcgcgt
ccgggcgaggcggttctcgccgaagcaaagcggctcggcatcgaggtgctgaccgactat
gccgtcgtcgatacatcaggcaagctgcgcgtcgcctcgatgaccgtctcgcgcaacggc
agttccgcaacccgcaagatccccgtggatgccctcctggtttcggcgggctggacgccc
tccgttcatctcttttcgcaatcgcgcggcaagctgaaattcgataccgagaagcagcgc
ttcctgccgggcacctatgttcaggattgcctttcggtcggcgcctgcaacggcacggat
gggctgcaagccgcgatcgaggaatcacttgccgccggcgagctgatggcgcgcgcgacc
ggcagcaccaatggcggagagaagatccagctccacgccgagcaggccttcgaatggaca
ggcggcatgatcggtgctgccgaaggtgcgggaccggatacgaatgccaaggctttcgtc
gatttccagcacgatgtctgcgccaaggatatccgccttgcagtgcgcgaaggcatgcat
tccatcgagcatatcaagcgcttcaccaccaacggcatggcgtccgaccagggcaaacta
tccaacatgcatggcctggcgatcgctgccgaaatgctcggcaaggatattccgcaggtc
ggtctcaccaccttccgcgcgccctatacgcccgttacctacggcacgctgatcagccat
tcgcgcggggctctctttgatcccgcccgcaagacgccgatgcatgcctgggaagaggcg
cacggcgcgatcttcgaagatgtcggcaactggaagcgcgcctggttctatccgcgtgcc
ggcgagaccatgcatcaggccgtcaatcgcgaatgccgtacggcgcgcgaagtggccggc
gtgttcgatgcctcgacgctcggcaagatcgaagtggtcgggccggatgcggcggaattc
ctgaacctcctctacaccaatgcctgggatacgctgaagcccggccgctgccgctacggc
atcatgacccgcgaagacggcttcgtttatgacgatggcgtcgtcggacgtctggccgag
gatcgcttccatgtgacgaccacgacgggcggtgcgccgcgtgtgctgcatcatatggaa
gactatctgcagaccgagttcccgcacctgaaggtgtggctgacctcgaccaccgagcaa
tgggctgttatcgccgtacagggtccgaaggcacgcgagatcatcgagccgctggtcgag
ggccaggatctgtccaacgaggccttcccgcatatgagtgtcgccgagtgcaaggtttgc
ggcgtgccggcgcggctgttccgcgtctccttcaccggtgaagtcggctacgaaatcaat
gtgccggccgattatggccagtcggtttgggaggccgtatgggctcgcgctgagccgctg
ggcgcctgcgcctacggcaccgagaccatgcacgtgctccgcgctgagaagggctatatc
atcgtcggccaggataccgacggcacggtgacgcccgatgacgccggccttgcctgggcc
gtttccaagaagaagaccgatttcgtcggtattcgcggcctgaaacggcaggatctggtc
aaggaaggccgcaagcagctcgtcggtctcgtcacccgcgatccgaaggtggtgctggag
gagggcgcacagatcgttgccgatccgaacgagcagaagccgatggccatgctcggccat
gtcacctcgtcctactggtccgaaaatctcggccgctccatcgccttcgcgctggttgcc
ggcgggcgcgagcgcatgggcaagacgctctatgtgccgatgcccgacaagacgatatca
gtcgaggtgacggatctggtattttttgacaaggaaggaggccggatcaatggctga
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integrated database retrieval system