Rhizobium tropici: RTCIAT899_PB01570
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Entry
RTCIAT899_PB01570 CDS
T02432
Symbol
nifD
Name
(GenBank) nitrogenase molybdenum-iron protein alpha chain
KO
K02586
nitrogenase molybdenum-iron protein alpha chain [EC:
1.18.6.1
]
Organism
rtr
Rhizobium tropici
Pathway
rtr00625
Chloroalkane and chloroalkene degradation
rtr00910
Nitrogen metabolism
rtr01100
Metabolic pathways
rtr01120
Microbial metabolism in diverse environments
Module
rtr_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RTCIAT899_PB01570 (nifD)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
RTCIAT899_PB01570 (nifD)
Enzymes [BR:
rtr01000
]
1. Oxidoreductases
1.18 Acting on iron-sulfur proteins as donors
1.18.6 With dinitrogen as acceptor
1.18.6.1 nitrogenase
RTCIAT899_PB01570 (nifD)
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Motif
Pfam:
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
AGB73583
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All DBs
Position
pRtrCIAT899b:286316..287818
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AA seq
500 aa
AA seq
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MSLDYEKNGALHEKLIADVLSQYPDKAAKRRNKHLGVATGKDATDKEDDVLSECSVKSNI
KSIPGVMTIRGCAYAGSKGVVWGPIKDMVHISHGPVGCGQYSWSQRRNYYVGTTGIDTFV
TMQFTSDFQERDIVFGGDKRLDKIIDEIEELFPLNKGVSIQSECPIGLIGDDIEAVSRKK
AKEHDKTIVPVRCEGFRGVSQSLGHHIANDSIRDWVFEKTDVEFEASPYDINVVGDYNIG
GDAWATRILLEEMGLRVVGNWSGDATLAEVERAPKAKLNLIHCYRSMNYICRHMEEKYGI
PWMEYNFFGPSQIEASLRKLAKHFGPEIEEKTEKVIAKYRPLVDAIIAKYRPRLQSKTVM
LYVGGLRPRHVVTAYEDLGMEIVGTGYEFAHNDDYQRTGHYVKKGTLIYDDATGYELEKF
IEGIRPDLVGSGIKEKYPVQKMGIPFRQMHSWDYSGPYHGYDGFAIFAKDMDLAINNPVW
DLYDAPWKRKVAPAEAVAAE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgactacgagaaaaacggcgctttgcatgaaaagcttatagcggacgtgctg
tcgcaatatccggacaaggcggcgaagcgccgcaacaagcacctcggcgttgcaacgggc
aaagacgcgaccgacaaggaggacgacgttctttccgaatgcagcgtcaaatcgaatatc
aaatccattccgggcgttatgaccatccgcggctgcgcctatgccggttccaaaggtgtc
gtgtgggggccgatcaaggatatggtccacatctcccatggaccggttggttgcggccaa
tattcctggtcgcagcgtcgcaattattatgtcggcacgacagggatcgacaccttcgtg
acgatgcagttcacctccgacttccaggaaagagacatcgttttcggcggcgacaagagg
ttggacaagatcatcgatgagatcgaggaattattcccgctgaacaaaggcgtcagcatc
caatcggaatgcccgatcggtctgattggcgatgacatcgaggctgtgtcgcgcaagaag
gcgaaggaacacgacaagacgatcgtgccggtgcgctgcgagggcttccgcggcgtatcg
caatcacttggccaccatatcgccaacgattccatccgtgactgggttttcgagaaaacg
gatgtcgagttcgaggcgagtccttacgacatcaacgtcgtcggcgattacaatatcggc
ggcgatgcgtgggccacgcgcatcctcctggaggagatggggttgcgcgtggtcggcaac
tggtctggagacgccacgcttgccgaagtggagcgggcgccgaaggccaagctcaacctc
atccactgttaccggtcgatgaactacatctgtcggcacatggaggaaaagtacggcatt
ccatggatggaatacaatttctttggtccgtcgcagatcgaagcctctttgcgcaagctt
gccaagcatttcgggccggaaattgaggaaaagaccgagaaagtcattgccaagtaccgg
cctttggtcgacgccatcatcgccaaataccgaccacgcctccaaagcaagaccgtgatg
ctctacgtcggcggtttgcgccctcgtcacgtggtcacggcctacgaggatctcggcatg
gagatcgttggcaccggctacgagttcgcccacaacgacgactatcagcgcaccggccat
tacgtgaaaaaaggcacgctcatctacgacgacgcgaccggttatgaactggaaaaattc
atcgaggggatccgccccgatctcgtaggctccggtatcaaggaaaagtacccggtgcag
aagatgggcattccattccgccagatgcattcgtgggactactccggcccgtatcatggc
tacgacggctttgccatctttgccaaagacatggacctcgccatcaacaatccagtctgg
gatctttacgacgccccctggaagagaaaggtcgcgccggctgaggcggttgcggccgaa
tga
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