Raoultibacter timonensis: CE91St31_13560
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Entry
CE91St31_13560 CDS
T08072
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rts
Raoultibacter timonensis
Pathway
rts03030
DNA replication
rts03410
Base excision repair
rts03420
Nucleotide excision repair
rts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CE91St31_13560 (polA)
03410 Base excision repair
CE91St31_13560 (polA)
03420 Nucleotide excision repair
CE91St31_13560 (polA)
03440 Homologous recombination
CE91St31_13560 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rts03032
]
CE91St31_13560 (polA)
03400 DNA repair and recombination proteins [BR:
rts03400
]
CE91St31_13560 (polA)
Enzymes [BR:
rts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CE91St31_13560 (polA)
DNA replication proteins [BR:
rts03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CE91St31_13560 (polA)
DNA repair and recombination proteins [BR:
rts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CE91St31_13560 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CE91St31_13560 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH
PPR_1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BDF50626
LinkDB
All DBs
Position
1660454..1663075
Genome browser
AA seq
873 aa
AA seq
DB search
MSKKIAVIDGNSLMHRAYHAVPPTMNAPDGRPTNAVFGFISMLLKFVETEQPDAIVCAFD
EGRPAFRMEAIEAYKAQRPPMDDDLKVQFPMIEGLLDAMGIPVVCVKGWEGDDILGTIAS
RDEALGFETLLVTGDKDAYQLASELTRIVTTKKGISDVAVYGPAEVVDRYGIEPSQVPDY
LGLKGDPSDNIPGVPGIGEKTASKILQQYGSLEEVYANLDKFRGKQLENLRDNEDAAFAS
RKVATIVRDLDFPLDLEAVSFPSFDEAKVSEAFGALRFNAHLKKVLALAGGGRSQVDLSW
EPITRGGEALVLVDEALRAGERVGVAFEESDQASLFDAGLTLAVGTSGGTALFEQDDALA
VFARIVREGSFAALDVKKTVQYVYPADTSAKGLVDDRDLLAMDAFDLGLAAYVMNSSVSE
YTYNALLDGYCGGVMPEAENDEQAAAMSAAAARALIGPLKKALEEDGGWEACGEIDFPLV
AVLAIVERTGAAIDVERLNRLGSGTQEDLDELSAQIYRIAGEEFNIDSPKQLAHILFDVL
GLTPMKKTQRGYSTNATVLKELAKVHELPDLIIRYRELAKIKSTYIDALPRMRGGDGRLH
TSFNQTVTTTGRLSSSDPNLQNIPVRTEFGRHIRECFVPLDPAHKFLSADYSQIELRLLA
HLSGDEGLIEAFCSGEDFHARTASRVFDIPVDEITPELRSRAKAVNFGIVYGQQAFGLAQ
SLDIPYAEAKEMIERYFAAYPGVRTYLDQTIKDATETGFAVTMFGRKRHIPELTSGNQVQ
RGFGERTAMNHPMQGSAADIIKLAMSRVERRLAEGGFKAKLLLQVHDELDFSVPEDEIEA
LSAMVRDIMEHAAELRVPLDVDVSFGDNWAEAH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaagatcgccgtcatcgacggaaactcgctgatgcaccgagcctatcatgcg
gtgcccccgaccatgaacgcccccgacggcaggcccaccaatgccgtgttcggcttcatc
tccatgctgctgaagttcgtcgaaaccgagcagcccgatgcgatcgtctgcgcgttcgac
gagggccgcccggcgtttcgcatggaggcaatcgaagcgtacaaggcgcagcgtccgccg
atggacgacgacctcaaggtgcagttccctatgatcgaaggcttgctcgatgcgatgggc
atccccgtcgtgtgcgtcaaaggctgggagggcgacgacatcctcggaaccatcgcgtcg
cgcgacgaggctctcggcttcgagacgctgctcgtgacgggcgataaggacgcctatcaa
ctggcaagcgagctcacccgtatcgtaaccaccaagaagggcatttccgacgttgccgtg
tacgggcccgcagaggttgtggatcgctacggcatcgagccttctcaggtaccggattac
ctcggtctcaagggcgacccgtccgacaacattccgggcgtgcccggcatcggcgagaaa
accgcttcgaagatcctgcaacagtacggatcgctcgaggaggtgtacgcgaatctcgat
aagtttcgcggcaaacagctcgagaacctccgcgacaacgaggatgcggcgtttgcgagc
cgcaaggttgcgaccatcgtgcgcgacctcgatttcccgctcgacctcgaagcggtatcg
tttccctcgttcgacgaggcgaaggtgtcggaggcgttcggcgcgctgcgcttcaacgct
cacctgaaaaaggtgctcgcccttgcaggcggcgggcgcagccaggttgatttgagctgg
gagccgattacgcgcgggggcgaagcgcttgtcctcgtcgatgaggctctgagggcgggc
gagcgggtcggcgtcgctttcgaggagagcgatcaggcgtcgttgttcgacgcagggttg
acgttggctgtcgggacgtcggggggaacggcgttgttcgagcaggacgatgcgctcgcg
gtgtttgcccgcatcgtacgcgagggatcgttcgcggcgctcgacgtgaagaaaaccgtg
cagtacgtctatcccgccgacacctccgccaaagggctcgtcgacgatcgggacctgctt
gcgatggatgcgttcgacctggggctcgctgcctacgttatgaactcgtcggttagcgag
tatacctataacgccctgcttgacgggtactgcggcggtgttatgcccgaagcggagaac
gacgagcaggctgccgctatgagcgcggccgccgcacgggccttgatcgggcctttgaaa
aaggcgctcgaagaggacgggggctgggaggcgtgcggcgagatcgacttcccgctcgtt
gcggtgctcgctatcgtcgagcgcactggtgccgcgatcgacgtggagcgcctcaaccgt
ctcggaagcggcacgcaggaggatctcgacgagctttccgcgcagatataccgcattgcg
ggcgaagagttcaacatcgactccccgaaacagctcgcccacatcctgttcgacgttctc
ggccttacgccgatgaagaagacgcagcggggctattccacgaacgcaacggtgctcaaa
gagcttgccaaggtccacgagcttcccgatctcatcatcaggtatcgcgaacttgccaaa
atcaagtcgacctacatcgatgctctgccgcggatgcgcggcggcgacgggcggctccat
acgtcgttcaaccagacggttacgaccacggggcgcctctcgtcgtccgatccgaacctg
cagaacattccggtgcgtaccgaattcggcaggcacatccgcgagtgcttcgtgccgctc
gatccggcgcacaagttcctctcggccgactactcgcagatcgagctgaggctcttggct
cacctttcgggtgacgaggggctcatcgaagcgttttgctcgggtgaggattttcacgcc
cgcaccgcgtctcgcgtattcgacatccccgtcgacgagatcactccagagcttcgcagc
agggctaaggccgtcaacttcggtatcgtgtacgggcagcaggcgttcgggctcgcccag
agccttgatatcccgtatgccgaggccaaggagatgatcgagcgctatttcgcggcgtat
ccgggcgtgcggacctacctcgatcaaacgatcaaggatgcaacggaaacgggcttcgcc
gtgacgatgttcggccgtaagcgccatatccccgagctcacttcgggaaatcaagtgcag
cgcggattcggcgagcgcacggccatgaaccatcccatgcaaggttcggctgccgatatc
atcaagctggcgatgagccgcgtcgagcggcgcttggcggaaggcggcttcaaagcgaag
ctcctcttgcaggtgcatgacgaactggacttctcggtacccgaagacgagatcgaggcc
ctgtcggccatggtgcgggatatcatggaacatgcagccgagctcagggttcccctcgac
gtcgacgtttctttcggcgataactgggccgaagcccactga
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