Rhizobium tumorigenes: PR017_07640
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Entry
PR017_07640 CDS
T08990
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00240
Pyrimidine metabolism
rtu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PR017_07640
Enzymes [BR:
rtu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
PR017_07640
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
TcdA_TcdB_pore
Motif
Other DBs
NCBI-ProteinID:
WFR96972
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Position
1527896..1528822
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AA seq
308 aa
AA seq
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MTKPFSALLPISYSSEVAAAKARGAPIVALESTIITHGMPYPGNIDMARSVEAIIREEGA
VPATIAVIHGTLHIGLEPAELESLAQTTDAMKVSRADLAFAIAERRTGATTVAATMIAAA
RAGIKVFATGGIGGVHRGAETSFDISADLEELARTGVIVVCAGAKAILDIPKTLEVLETR
GVPVVTFGSPEFPAFWSRASGLPSPLTLNSPAAIANFQTVREQLGIDGGMLIANPVPEED
QIEREEMEIYIERALDSAEREEVVGKAVTPYLLSTIFDITGGRSLKTNIALVENNARLAA
EIAVALAD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaccattttccgctctgttgccgatctcatattcaagtgaagtcgcagccgcc
aaggcacgcggcgcaccgatcgtcgcgctcgaatcgacaatcatcacccatggcatgccc
tatcccggcaacatcgacatggcccgcagcgtcgaggcgatcatccgcgaagaaggcgcc
gtgccggcaaccatcgcagtcatccacggaacgttgcacatcggccttgagccggccgag
ctcgagagcctcgcccagaccacggacgcgatgaaagtgtcgcgcgccgatttagccttt
gccatcgccgagcgccgcaccggcgcaaccacggttgctgccacgatgattgcagcagca
agggccggtatcaaggtgtttgccaccggcggcatcggtggcgtgcatcgcggcgccgag
accagcttcgatatctcggccgaccttgaggaactggcccgcaccggcgtcatcgtcgtc
tgcgccggcgccaaggccatcctcgacattccgaagacgctggaagtgctggaaacccgc
ggtgttcccgtcgtcaccttcggcagcccggaattcccggccttctggtcgcgagcctcc
ggcctgccaagcccgctgacgctgaacagcccggcagcaatcgccaatttccagacggtg
cgcgagcagctgggcatcgatggcggcatgctgatcgccaatcccgtgccggaggaagac
cagatcgagcgcgaggagatggagatttacatcgagcgagcgctcgacagcgccgagcgc
gaggaagtggtcggcaaggcagtcacgccctacctgctcagcaccatcttcgacatcacc
ggcggccgcagcctgaagaccaacatcgcgctggtcgagaacaatgcgcgcctcgctgcc
gaaatcgccgtcgctctggcggattaa
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