Rhizobium tumorigenes: PR017_10515
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Entry
PR017_10515 CDS
T08990
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00230
Purine metabolism
rtu01100
Metabolic pathways
rtu01120
Microbial metabolism in diverse environments
rtu01232
Nucleotide metabolism
Module
rtu_M00958
Adenine ribonucleotide degradation, AMP => Urate
rtu_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PR017_10515 (xdhB)
Enzymes [BR:
rtu01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
PR017_10515 (xdhB)
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
FTR
Motif
Other DBs
NCBI-ProteinID:
WFR94271
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All DBs
Position
2132638..2134974
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AA seq
778 aa
AA seq
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MDKSTFEKRKIINGAMHASLKHDSAHKHVTGAADYIDDIPEPANLLHGALGLSDRAHAEI
EGIDLSAVAAVPGVIWVMTGADVPGINDVSSNGKHDEPLLAETKVEFHGQPIFAVIATTR
EIARRAARLAKIDYRDLPHWSDIDGALANGGPVVYEPMTLKRGEPETEMAKAPQRLKGQM
RIGGQEHFYLESHIAMAIPGEDDEVTVWSSTQHPSEIQHIVGHVLNIPSNAVTVNVRRMG
GGFGGKETQGNQFAALAAIAAKKLNRAVKFRPDRDEDMIATGKRHDFLVDYEVGFDDDGR
IHALDATFAARCGFSSDLSGPVTDRALFHADSSYFYPHVHLVSKPLKTHTVSNTAFRGFG
GPQGIVGAERVIEEIAYAVGKDPLDIRKLNFYGQPGSGRTLTPYHQEVEDNIIGRLVDEL
ETSADYRARRKAIIEFNRSSRYIRKGIALTPVKFGISFTMTAFNQAGALVHVYQDGSIHL
NHGGTEMGQGLYTKVAQVLAEAFQVDIERVKITATTTAKVPNTSATAASSGSDLNGMAAY
DAARQIKERLVAFAAAKWNVEPADVIFLPNRVRVGEIEIPFPDLINQAYFARVQLSAAGF
YKTPKIHWDRKAGRGTPFYYFSYGAACSEVSIDTLTGEYLIDRTDILHDVGRSLNPAIDI
GQIEGAFVQGMGWLTTEELWWDAKGRLRTHAPSTYKIPLASDRPKIFNVKLAEWSENAEP
TIGRSKAVGEPPFVLGVSVLEALSMAIASVADYRLCPRLDAPATPERVLMAVERLKGL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatccaccttcgagaagcggaagattatcaacggcgccatgcacgcgtcgctg
aagcacgattcggcgcacaagcatgtcaccggcgctgccgactacatcgacgacatcccg
gagcccgccaacctcctgcatggcgcgctggggctttccgaccgggcccatgcggagatc
gagggcattgacctttccgccgtagccgccgtccccggcgtgatctgggtgatgaccggc
gccgacgtgcctgggattaacgacgtcagttcgaacggcaagcacgacgagccgctgctc
gccgaaacaaaggtcgaattccacggtcagccgatcttcgccgtcatcgcgacgacgcgg
gagattgcgcgccgtgccgcgcggctggccaagatcgactatcgcgacctgccgcactgg
agcgacatcgatggcgcgctggccaacggcggccccgtcgtctacgagcctatgaccctc
aagcgcggtgaacccgagaccgagatggcaaaggcaccgcagcggctgaagggccagatg
cggatcggtggccaggagcatttctatctcgaaagccatattgccatggctatccccggc
gaggacgacgaggtgaccgtctggtcgtcgacccagcatccgagcgaaatccagcatatc
gtcggccacgtcctcaacatcccgtccaacgccgtgaccgtcaacgtccgccggatgggc
ggtggcttcggcggcaaggagacccaaggtaaccagtttgcagcgctcgccgccatcgcc
gcgaaaaaactcaaccgcgccgtcaagttccgcccagaccgcgacgaggacatgatcgcc
accggcaagcgccacgatttcctcgtcgattacgaagtcggcttcgacgacgacggccgc
atccacgcactcgacgccacctttgccgctcgctgcggcttctcctccgatctgtccggc
ccggtcaccgaccgtgcgcttttccacgccgattccagctatttctatccgcacgtccat
ctggtctcgaagccgctgaagacccacaccgtctcgaacaccgcctttcgcggcttcggc
ggtccgcagggcatcgtcggcgccgagcgcgtcatcgaggagatcgcctatgctgttggc
aaggatccactggatatccgcaagctgaatttctacggtcagccgggctccggccggacg
ctgaccccctatcaccaggaggtcgaggacaacatcatcggccgtctcgtcgacgaactc
gagacctccgccgactaccgggcccgtcgcaaggcgatcatcgaattcaaccgcagcagc
cgttacatccgcaagggcatcgcgctgacgcctgtcaagttcggcatctcgttcacgatg
actgccttcaatcaggccggcgcactcgtgcatgtctatcaggatggctcgatccacctg
aaccacggcggcaccgagatgggccagggcctctacaccaaggtcgcccaggtgctggcc
gaggccttccaggtcgatatcgagcgagtgaagatcaccgcgacgaccacggccaaggtg
ccgaacacctcggccacggccgcctcctccggttccgacctcaacggcatggcagcctat
gacgccgcccggcagatcaaggagcggctggtcgccttcgctgccgccaagtggaatgtc
gagccggccgacgtcatattcctgccgaaccgggttcgtgtgggcgagatcgagatcccc
ttccccgatctcatcaaccaggcctatttcgcccgcgtccagctctccgcggccggcttc
tacaagaccccgaaaatccactgggaccgcaaggctggccgtggcacgccgttctactat
ttctcctacggcgccgcgtgctcggaagtctccatcgacacgctgaccggcgaatatctg
atcgaccgcaccgatatcctccacgatgtcggcaggtcgctgaacccggccatcgacatc
ggccagatcgaaggcgccttcgtgcagggcatgggctggctgacaacggaggagttatgg
tgggacgccaagggccgcctgcgcacccacgcaccctcgacctacaagatcccgctcgcc
tccgaccggccgaaaatcttcaacgtcaagctcgccgaatggtcggaaaatgccgagccg
accatcggccgctcaaaagccgtcggcgaaccccccttcgtgctcggcgtttccgtgctc
gaagccctctccatggccatcgccagcgtcgccgactaccgcctctgccccagactcgac
gctcccgctacgcccgagcgggtgctgatggccgtagagcggctgaaaggcctatga
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