Rhizobium tumorigenes: PR017_27680
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Entry
PR017_27680 CDS
T08990
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rtu
Rhizobium tumorigenes
Pathway
rtu00330
Arginine and proline metabolism
rtu00480
Glutathione metabolism
rtu01100
Metabolic pathways
rtu01110
Biosynthesis of secondary metabolites
rtu04148
Efferocytosis
Module
rtu_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rtu00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PR017_27680
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PR017_27680
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PR017_27680
Enzymes [BR:
rtu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PR017_27680
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
WFR99176
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Position
unnamed3:157300..158544
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AA seq
414 aa
AA seq
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MSVLRASSVIDVSDTSPCHLQAKIHDNLSAFNRQRRQEPPLRVFADVDDVIARLQPSEPV
FCLEPAKLLASAQSFEDFPGRSLFAVKCNPHPLVLQTLFAAGITDFDVASLDEIRLVDGM
FGIGAGQFFNNPAKTRPAIKAASQLHGIRFYTADCIDEIEKIIHEVGSRDDLIIAVRLAT
KPADARYILSTKFGAQPAEAKLMLEHINKKGIQAGISFHVGSQCLAPTAFADAVELAAKV
ARSAGVELSVLNVGGGFPAAYPGDDVAGREVYFGHLMRSIREACLPRACMVLCEPGRALV
ADAGKTIVQVVMRRGRNIFINDGIFGTLQELGHPKERRPVRLIRNGGSCISKNAEFKVYG
PTCDSNDVLGAAFCLPDDVQEGDWIEIAMMGAYSLSMRTHFNGFFTSNIVSLGN
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcttcgagcttcgtccgtcattgacgtgtcagacacttctccatgccatctg
caggcgaaaatccacgataacctgtcagcatttaatcgtcagcggagacaggaaccgccg
cttcgggtatttgccgatgtcgatgatgtcattgcgaggctccagcctagcgagcccgtc
ttttgtctggagcccgccaagctgctagcatctgcccagagctttgaagactttcctggt
cggtcactctttgcggtcaagtgcaatccccaccctttggtgctgcaaacgctctttgca
gcaggtattaccgatttcgacgttgcatcgcttgatgaaatccgattggtcgatggcatg
tttgggattggcgcgggccagtttttcaacaacccggcaaagacgcggcctgcgatcaag
gccgccagccagctccacggaattcgattctataccgcagattgcattgatgagattgaa
aaaattatccacgaagtcggcagccgagatgatttgatcattgccgtcagactggctacc
aagcccgctgatgcacgatacatcctttcgacaaagtttggcgcacaaccagcggaagcc
aagttgatgttggagcacatcaacaaaaagggcatccaggctggtatatctttccacgtc
ggttctcaatgccttgcgccaaccgcctttgccgatgctgtggaattggcagccaaggtt
gctcgatcagccggcgtggagctaagcgttctgaatgtcggcggcggctttcccgcagcc
tatcccggtgacgatgtcgcgggaagagaggtatacttcggtcatctgatgcgatcgatc
agggaagcttgtctgccgcgggcatgtatggtcctctgcgaacctgggagagcgttggtt
gccgacgcggggaagacgatcgtgcaggtagtcatgcgccgcgggcgcaacatttttatc
aatgacggcatcttcgggacattgcaggaattggggcatcccaaagagcggcgtcctgtt
cgactgatccgcaacggcgggtcgtgtatttctaaaaacgccgaattcaaagtttatggt
ccaacatgtgacagcaatgatgtgctcggcgcagctttctgtctgccggatgacgttcag
gaaggcgactggatcgaaatagccatgatgggtgcatatagtctttcgatgcgcacgcat
tttaatggattttttaccagcaacatcgtttcacttgggaattga
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