Rathayibacter toxicus 70137: TI83_04950
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Entry
TI83_04950 CDS
T03670
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rtx
Rathayibacter toxicus 70137
Pathway
rtx00900
Terpenoid backbone biosynthesis
rtx01100
Metabolic pathways
rtx01110
Biosynthesis of secondary metabolites
Module
rtx_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rtx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
TI83_04950
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rtx01006
]
TI83_04950
Enzymes [BR:
rtx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
TI83_04950
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
TI83_04950
2.5.1.29 geranylgeranyl diphosphate synthase
TI83_04950
Prenyltransferases [BR:
rtx01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
TI83_04950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AJM77470
UniProt:
A0A0C5BGZ5
LinkDB
All DBs
Position
complement(1093348..1094448)
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AA seq
366 aa
AA seq
DB search
MNYTTSLIDRVQVRINDFLAERRLILRPFGEDVSALNDLSRDFLSGGKRFRARFCEAGWM
AVSNIPSEEIRSGADPIATTGASLELFHAAALVHDDLIDNSDTRRGAPSAHRRFSSLHDA
GGWTGSGDEFGRSCAILLGDLLLVWADELFAEAERSVADGVAAGRARAEFNLMRTEVTLG
QYLDILEENTWAQHPEHEHLTRAERIVVYKSAKYSIEAPLVIGGSLGGGGEAQLNALSRF
GLPLGIAFQLRDDILGVFGDSAITGKPTGDDLREGKRTVLLGLARAACSESERAELDTVV
GCRSADSAHIRRAQEIIIGSGALQRLEERIAHEVGIALAVLPEAPFRSEGVVELRELAER
VSVRTS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
gtgaactacaccactagtctgatcgatcgcgtccaggtccgaatcaatgacttcctcgct
gaacgcagattaattttgcgccccttcggcgaggacgtctccgccctcaatgatctttcg
cgggactttctcagcggaggaaaacgtttccgcgcccggttttgcgaggcgggctggatg
gctgtctcgaacattccctccgaggagatacgcagcggtgcggatccgatcgccacgact
ggggctagtctcgagctctttcacgccgccgctctcgtccacgatgacctgatcgacaat
tcggacacccggcgtggagcaccctccgcacaccgccgcttttcctccctacacgatgca
ggaggctggaccggctcgggcgacgaattcggtcgctcctgcgccattctcttgggcgac
ctcttactcgtctgggctgacgaacttttcgccgaagcggaacgaagcgttgcggacggt
gtagcagcgggccgtgcccgcgctgaattcaacctgatgcgcactgaggtcactctcggc
caatatctcgacatcctcgaagagaacacctgggcccagcatcctgagcacgaacacttg
actcgagccgagcgaatcgtggtctacaagagcgccaagtacagcattgaagctcccctg
gtcatcggtggatcgctcggcggaggcggagaggctcagctcaacgcactgagccgcttc
ggactacctctagggattgcgtttcaactgcgcgacgatatcctcggcgtctttggggat
tccgcgatcaccggcaaacctaccggtgacgatctgcgagaaggcaagcgcacagttctc
ctcggcttagcgcgcgccgcctgctcggaaagcgagcgcgcagagctggacaccgtcgtc
gggtgcagaagcgccgactccgctcacattcgccgagctcaagaaatcatcatcggcagt
ggcgccctacaacgcctcgaagagcggatcgcgcacgaagtgggcattgcgctcgcggtc
ctccctgaggcgcctttccgttccgagggcgtggtcgagctgcgtgaactcgccgagcgc
gtcagcgtgcggacgtcttag
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