Rugamonas sp. DEMB1: QC826_25305
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Entry
QC826_25305 CDS
T08988
Name
(GenBank) CobD/CbiB family cobalamin biosynthesis protein
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
rug
Rugamonas sp. DEMB1
Pathway
rug00860
Porphyrin metabolism
rug01100
Metabolic pathways
rug01240
Biosynthesis of cofactors
Module
rug_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
QC826_25305
Enzymes [BR:
rug01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
QC826_25305
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Motif
Pfam:
CobD_Cbib
YtfJ_HI0045
Motif
Other DBs
NCBI-ProteinID:
WGG49790
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Position
5482390..5483355
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AA seq
321 aa
AA seq
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MLIGLTLTQAALLLLAGVLLDLLLGETRRFHPLVGFGNLAYALERRLNQGRWRFARGLLA
WSLAVAPLSALSAWLIFQAGGAPALAAHALLLYFCIGLRSLRDHNLPIAQALTQGDLPRA
RLLTARIVSRDTAQANEADLAKASAESLLENGNDAVFGTLFWFAVAGGPGALLFRLANTL
DAMWGYRNARFNEFGCAPARIDDVLNLIPARLTALSYVLLAPTLAGKRRAWQCWRAQAPT
WSSPNAGPVMSSGAGALGLELGGAAVYDGEVEQRPTLGSGTAARAGDIVRAWRLVAGTTA
LWLLCAAVAAATVHLIGGTHA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcggcctgacgctgacacaagcggccctgctgttgctggccggcgtgctgctc
gacctgctgttgggcgagacgcgccgcttccatccgctggtcggcttcggcaatctggcc
tatgcgctggaacgccgtttgaaccagggccgctggcgttttgcacgcggcctgctggcg
tggtcgctggcggtggcgccgctgagcgcgctcagcgcctggctgatttttcaagccggc
ggcgcgccggccctggcggcgcacgcgctgctgctgtacttctgcatcggcctgcgcagc
ctgcgcgaccacaacctgccgatcgcccaggcgctgacgcaaggcgacctaccccgggcg
cgcctgctgacggcccgcatcgtcagccgcgacacggcgcaggccaacgaggccgacctg
gccaaggccagcgccgaatcgctgctcgaaaacggcaacgacgccgtcttcggcacgctg
ttctggttcgccgtcgccggcggccccggcgccctgctgttccgcctggcgaacacgctc
gacgcgatgtggggctaccgcaacgcgcgcttcaatgaattcggctgcgccccggcgcgc
atcgacgacgtgctgaacctaatcccggcgcggctgaccgcgctgtcctacgtgctgctg
gcgcccacgctggccggcaagcgccgcgcctggcaatgctggcgcgctcaagcccccacc
tggagcagcccgaacgccgggccggtgatgtccagcggcgccggcgcgctcggcctggaa
ctgggcggcgccgccgtgtacgacggcgaggtcgagcagcgtcccacgctgggtagcggc
acggcggcgcgcgccggcgacatcgtccgcgcctggcgcctggtcgccggcaccaccgcg
ctgtggctgctctgcgccgccgtcgcggcggcgaccgtccacctgattggaggcacgcat
gcttga
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