Rugamonas sp. DEMB1: QC826_29305
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Entry
QC826_29305 CDS
T08988
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
rug
Rugamonas sp. DEMB1
Brite
KEGG Orthology (KO) [BR:
rug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rug03009
]
QC826_29305 (rsmD)
Enzymes [BR:
rug01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
QC826_29305 (rsmD)
Ribosome biogenesis [BR:
rug03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
QC826_29305 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
MTS
MethyltransfD12
Methyltransf_24
Methyltransf_25
RsmJ
N6_N4_Mtase
Methyltransf_15
PrmA
Methyltransf_20
TRM
Methyltr_RsmB-F
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
WGG50455
LinkDB
All DBs
Position
complement(6358047..6358712)
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AA seq
221 aa
AA seq
DB search
MQKKPAKAAKTPVHGPQHSNQVRIIGGTWKRTPLPVLAALGLRPTPDRVRETVFNWINHL
RNANWVEAQVLDLFAGSGALGFEAASRGAKSVLMVDSHSPVVRQLELIQEKLKADTVQIV
RGDAFAVAQSAAARSQRFDLIFLDPPYQQDFLSRILPLCAPLLKEGGLVYAESGVPLPLD
TDTGAEADAARPDWLAPWEVIRADKAGMVHFHLLRYKGAAA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaagcccgccaaagccgcaaaaacccccgtccacggtccccaacacagcaac
caggtgcgcatcatcggcggcacatggaagcgcacgccgctgccggtgctggccgcgctc
ggcctgcggccgacgccggaccgggtgcgcgagaccgtcttcaactggatcaaccacctg
cgcaacgccaactgggtcgaggcccaggtgctcgacctgttcgccggcagcggcgcgctc
ggcttcgaggcggccagccgcggcgccaagtcggtgctgatggtcgacagccacagtccg
gtggtgcgccagctcgagctgatccaggaaaaactcaaggccgacacggtgcagatcgtc
cgtggcgacgccttcgccgtggcccagtcggccgccgcgcgcagccagcgcttcgacctg
atcttcctcgacccgccctaccagcaggacttcctcagccgcattttgccgctgtgcgcc
ccgctgctcaaggagggcggcctggtctacgccgagtccggcgtgcccctgccgctcgac
acggacaccggcgccgaggccgacgcggcgcggccggactggctggcgccgtgggaagtg
atccgcgccgacaaggccggcatggtccacttccacctgctcaggtacaagggcgcggcg
gcttga
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