Ruminococcus sp. SR1/5: CK1_35080
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Entry
CK1_35080 CDS
T02601
Name
(GenBank) thiazole biosynthesis/tRNA modification protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
rum
Ruminococcus sp. SR1/5
Pathway
rum00730
Thiamine metabolism
rum01100
Metabolic pathways
rum01240
Biosynthesis of cofactors
rum04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CK1_35080
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CK1_35080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rum03016
]
CK1_35080
Enzymes [BR:
rum01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CK1_35080
Transfer RNA biogenesis [BR:
rum03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CK1_35080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
ATP_bind_3
NAD_synthase
Cir_N
Motif
Other DBs
NCBI-ProteinID:
CBL21259
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Position
3075935..3077116
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AA seq
393 aa
AA seq
DB search
MLVHAFLIKYAEIALKGKNRYRFEDALVHQMEIALSKIEGDFEVKKEQGRVYVFCPENYD
YDEAVDALQHVFGIVGICPVMIYEEQGFEKLAEDVVGYMKQWHPDFNGSFKVWTRRAKKS
YPISSMEVSAELGGRILDAFPEASVDVHHPELDLSVEIRDKIYVYSQTIPGAGGMPIGTN
GKAMLLLSGGIDSPVAGYMIAKRGVKIDAVYFHAPPYTSERAKQKVVDLARLVAKYSGPI
RLHVVNFTDIQLYIYDQCPHDELTIIMRRYMMRIAEHFAKKDRCLGLITGESIGQVASQT
LQSLASTNEVCTLPVYRPVIGFDKEEIVRISRKIDTFETSIQPFEDCCTIFVAKHPVTKP
NLKVIRRSEQKLSEKIDELMETALNTTEIIEIQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttagtacatgcatttctgatcaaatatgcggaaattgcccttaagggaaaaaaccgc
tatcgttttgaagatgctctcgtacatcagatggagatcgcactctccaagatcgaggga
gattttgaagtaaaaaaagagcagggaagagtttatgtattctgcccggagaattatgat
tacgatgaggctgtagatgcgctgcagcatgtattcggtattgtaggcatctgcccggtt
atgatctatgaagaacagggctttgagaagcttgccgaagatgttgtgggttatatgaag
cagtggcatccggactttaacggaagcttcaaggtctggacacgccgcgcaaagaaatcc
tatccgatcagctccatggaagtcagtgctgagcttggcggacgtatcctggatgcgttc
ccggaggcgagtgtagatgttcatcatccggagctggatctttctgttgagatccgtgac
aagatttacgtatattcccagaccattccgggcgcgggcggaatgcccatcggaacaaac
ggaaaagccatgcttcttctttccggtgggatcgacagtccggttgccggctatatgatc
gcaaaacgtggtgttaagatcgatgcggtatatttccatgcaccgccctacaccagtgag
cgcgcaaaacagaaggtagtggatcttgcccgcctggtagccaaatacagcggaccgatc
cgtctccatgtagttaactttacagatatacagctttatatttatgatcagtgtcctcat
gatgagcttactattatcatgagaagatatatgatgcgtattgccgagcatttcgctaaa
aaagaccgttgtctcggacttatcacaggtgagagcatcggacaggttgcaagccagacc
ttacagagccttgcttctacaaatgaagtctgcacacttccggtatatcgtccggtgatc
ggctttgataaagaggagatcgtccgtatttccagaaagatcgatacctttgagacttct
attcagccgtttgaggattgctgtaccatctttgtagcgaaacatcctgtaacaaagccg
aatcttaaggtgatccgccgttctgagcagaagctttctgagaagatcgatgagcttatg
gaaacggctctgaataccacagagatcattgaaattcagtga
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