Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I02058
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Entry
RBI_I02058 CDS
T03158
Symbol
nifJ
Name
(GenBank) Pyruvate-flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00010
Glycolysis / Gluconeogenesis
rus00020
Citrate cycle (TCA cycle)
rus00620
Pyruvate metabolism
rus00650
Butanoate metabolism
rus01100
Metabolic pathways
rus01110
Biosynthesis of secondary metabolites
rus01120
Microbial metabolism in diverse environments
rus01200
Carbon metabolism
rus01210
2-Oxocarboxylic acid metabolism
Module
rus_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RBI_I02058 (nifJ)
00020 Citrate cycle (TCA cycle)
RBI_I02058 (nifJ)
00620 Pyruvate metabolism
RBI_I02058 (nifJ)
00650 Butanoate metabolism
RBI_I02058 (nifJ)
Enzymes [BR:
rus01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
RBI_I02058 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
TPP_enzyme_C
Fer4_7
Fer4_8
Fer4_9
Fer4_6
Fer4_16
Fer4_2
Fer4
Fer4_21
Fer4_10
Fer4_17
Fer4_4
Transketolase_C
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
CCO05756
UniProt:
W0U7I9
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All DBs
Position
I:complement(2218934..2222503)
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AA seq
1189 aa
AA seq
DB search
MARKMKTMDGNNAAAWASYPFTEVAAIYPITPSSVMAEVTDQWAAKGKENLFGTPVKLAE
MQSEAGASGTVHGSLAAGALTTTYTASQGLLLMIPNLYKIAGELLPCVIHVSARCVASHA
LNIFGDHSDIYACRQTGFAMLCSSNVQEVMDLGTVAHLSTIEGRVPFIHFFDGFRTSHEI
QKIETWDMEDVRDMVDFEKVEEFRKRALNPEHPVLRGTAQNPDIFFQAREACNPYYDAIP
GIVEDYMNKVNEKIGTNYKLFNYYGAPDATHVIVAMGSVCDTIEETIDYLNEKEGTKLGL
VKVRLYRPFRADKLVEAIPSTCEQISVLDRTKEPGSEGEPLYLDVVAALKGTQFHDVAIA
SGRYGLGSKDTTPAQIKAVYWNASWKDTYKPRFTIGIEDDVTNLSLETEGKLDSAPAGTT
ACKFWGLGADGTVGANKNSIKIIGDHTDLYAQAYFAYDSKKSGGVTVSHLRFGKTPIKST
YLINQADFVACHNESYITKYNMVQDIKPGGTFLLNCQWEHEELDKHLPGQVKRYIAENNI
KFYTINGVKIGKEIGLGNRINTVLQSAFFKLANIIPIDDAIKYMKDAATASYSKKGDAIV
KMNHDAIDAGCQQVHEVKVPASWKKCKDTPMGMPAAKCADKTLQDFVNNIQIPCNAQEGD
KLPVSTFTGMADGTFPQGSAAFEKRGIAVDVPAWNGDNCIQCNFCSYVCPHAVIRPVVMT
DAELKKAPKLAQEKAVAMTGMPGYNFVMTMSALDCTGCGSCVNVCPGKKGNKALSMMPLE
TQLAEQEVFNYGLTLAEKPEVFEKFKATTVKGSQFKQPLLEFSGACAGCGETPYAKLITQ
LFGDRMYIANATGCSSIWGGSAPSTPYTVNKDGKGPAWANSLFEDNAEYGYGMFLAQSTI
RNRTIAKVLELSKTTKAAALKKACEEYLETVDDGEKNSAATDNLIAALKKTKNKATEEIL
KDADYLRKKSMWIFGGDGWAYDIGFSGVDHVIAQGEDVNIFVFDTEVYSNTGGQSSKSTP
TGAIAQFAAAGKEVKKKDLAGIAMSYGYVYVAHVAMGADYNQCIKAIHEAESYHGPSIII
GYAPCINHGIKGGMSIAQTEEKKAVQAGYWHLYRFDPRLKAEGKNPFILDSKAPTADYKD
FIMGEVRYNALARQNPERAEKLFGKAVQNAKDRYDYLLRYAKLYNTEEK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaaatgaaaaccatggacggaaacaacgctgctgcttgggcgtcataccca
tttacagaagttgctgctatctatccaatcacaccatcatctgttatggcagaagtaaca
gaccagtgggctgccaagggtaaggaaaacctgtttggcactcctgtaaagcttgcagaa
atgcagtctgaggcaggtgcttcaggtacagtacacggctcacttgcagccggtgcgctc
acaacaacatatacagcatcacagggacttcttcttatgatccctaacctgtataagatc
gcaggtgagcttctcccttgcgttatccatgtatctgcaagatgtgtagcttcacacgca
cttaatattttcggcgaccattctgacatctatgcttgccgtcagacaggttttgctatg
ctttgttcttcaaatgtacaggaggtaatggacctgggtacagttgctcacctctcaact
atcgagggcagagtaccattcatccacttctttgacggattcagaacatctcacgagatc
cagaagatcgagacatgggatatggaagacgtaagagatatggttgacttcgagaaggta
gaggagttcagaaagagagctcttaaccctgagcatcctgtacttagaggtacagctcag
aaccctgatatcttcttccaggcaagagaagcttgtaacccatactatgacgctatccct
ggcatcgtagaggattacatgaacaaggtaaacgaaaagatcggcacaaactacaagctg
ttcaactactacggcgcaccagacgctacacacgttatcgtagctatgggttctgtttgt
gacactatcgaagaaacaattgattacctcaacgagaaggaaggcacaaagctcggtctt
gttaaggttagactttacagacctttccgtgctgacaagctcgttgaagctatcccttca
acttgtgagcagatctcagttcttgacagaactaaggagccaggttctgagggcgagcct
ctttatcttgacgttgttgctgctcttaagggtacacagttccatgatgtagctatcgct
tcaggcagatatggtcttggttctaaggatacaactcctgcacagatcaaggctgtttac
tggaatgcaagctggaaggatacatataagccaagatttactatcggtatcgaagacgac
gttacaaacctctctctcgaaactgagggcaagcttgactctgctccagcaggcacaact
gcttgtaagttctggggtcttggcgctgacggtactgttggtgcaaacaagaactctatc
aagatcattggtgaccatacagatctgtatgctcaggcatactttgcatatgactctaag
aagtcaggcggtgtaacagtttctcacctgagattcggtaagacacctatcaagtcaaca
taccttatcaatcaggctgactttgttgcttgtcataacgagtcttatatcactaagtac
aacatggtacaggatatcaagccaggcggaacattccttctgaactgccagtgggagcat
gaagagctggataagcacctcccaggtcaggtaaagagatatatcgctgagaacaatatc
aagttctatactatcaacggcgttaagatcggtaaggagatcggtctgggcaacagaata
aacactgttcttcagtctgcattcttcaagcttgctaacatcattcctatcgacgacgct
atcaagtacatgaaggacgctgctacagcttcttattctaagaagggcgacgctatcgtt
aagatgaaccatgacgctatcgacgctggatgtcagcaggttcacgaagttaaggttcct
gcatcttggaagaagtgcaaggatactccaatgggtatgcctgccgctaagtgcgcagat
aagacacttcaggacttcgtaaacaacattcagatcccttgcaacgctcaggaaggcgac
aagctccctgtttcaacattcacaggtatggcagacggtacattcccacagggttctgct
gcatttgagaagagaggtatcgctgttgacgttcctgcatggaatggtgacaactgtatc
cagtgtaacttctgttcatatgtatgtccacacgcagttatcagacctgttgtaatgaca
gacgctgagctgaagaaggctcctaagcttgctcaggagaaggcagtagctatgacaggt
atgcctggttacaacttcgtaatgacaatgtctgctctggactgcacaggctgcggttct
tgcgtaaatgtttgtcctggtaagaagggcaacaaggctctcagcatgatgccacttgaa
actcagctcgctgagcaggaagtattcaactatggtcttacacttgctgaaaagccagaa
gtattcgagaagttcaaggcaacaacagttaagggctcacagttcaagcagccactgctt
gaattctcaggcgcttgcgcaggctgcggtgaaacaccttatgctaagctcatcacacag
ctctttggtgacagaatgtacattgctaacgcaacaggctgttcatcaatttggggtggt
tcagctccttcaactccatacacagtaaacaaggacggcaagggtccagcttgggctaac
tcactgttcgaggataacgctgagtatggttacggtatgttccttgcacagtcaactatc
agaaacagaactatcgctaaggttcttgagctgtctaagacaactaaggctgcagctctt
aagaaggcttgcgaagagtatcttgaaacagtagatgacggcgagaagaactcagcagct
acagataaccttatcgctgctcttaagaagacaaagaataaggctactgaggagatcctt
aaggacgctgactatctgagaaagaagtcaatgtggatcttcggcggtgacggctgggct
tacgatatcggattctcaggcgttgaccacgttatcgctcagggcgaggacgtaaacatc
ttcgtattcgatactgaggtttactcaaatacaggcggacagtcatctaagtcaactcca
acaggtgctatcgctcagttcgcagcagctggtaaggaagttaagaagaaggatctcgca
ggtatcgcaatgtcttacggctatgtatatgtagctcacgttgcaatgggtgctgattac
aatcagtgcatcaaggctatccacgaggcagagtcttatcacggcccttcaatcatcatc
ggttatgctccatgtatcaaccatggtatcaagggtggtatgtcaattgctcagacagag
gagaagaaggctgttcaggctggttactggcatctgtacagattcgacccacgtcttaag
gcagagggcaagaatccatttatccttgattctaaggctccaacagctgactataaggac
ttcatcatgggcgaggtacgttacaacgcacttgctagacagaatcctgagagagctgag
aagctctttggtaaggctgttcagaacgctaaggacagatatgattatctgctcagatac
gctaagctttacaatactgaggaaaagtaa
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