Ruegeria sp. THAF33: FIU92_04555
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Entry
FIU92_04555 CDS
T06269
Symbol
fadJ
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rut
Ruegeria sp. THAF33
Pathway
rut00071
Fatty acid degradation
rut00280
Valine, leucine and isoleucine degradation
rut00310
Lysine degradation
rut00362
Benzoate degradation
rut00380
Tryptophan metabolism
rut00410
beta-Alanine metabolism
rut00640
Propanoate metabolism
rut00650
Butanoate metabolism
rut00907
Pinene, camphor and geraniol degradation
rut00930
Caprolactam degradation
rut01100
Metabolic pathways
rut01110
Biosynthesis of secondary metabolites
rut01120
Microbial metabolism in diverse environments
rut01200
Carbon metabolism
rut01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rut00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FIU92_04555 (fadJ)
00650 Butanoate metabolism
FIU92_04555 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
FIU92_04555 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FIU92_04555 (fadJ)
00310 Lysine degradation
FIU92_04555 (fadJ)
00380 Tryptophan metabolism
FIU92_04555 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FIU92_04555 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
FIU92_04555 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FIU92_04555 (fadJ)
00930 Caprolactam degradation
FIU92_04555 (fadJ)
Enzymes [BR:
rut01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FIU92_04555 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
FIU92_04555 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
FIU92_04555 (fadJ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAO
F420_oxidored
UDPG_MGDP_dh_N
2-Hacid_dh_C
Pyr_redox_2
Sacchrp_dh_NADP
NAD_Gly3P_dh_N
ApbA
Shikimate_DH
NAD_binding_8
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
QFT72289
UniProt:
A0A5P9GCQ8
LinkDB
All DBs
Position
complement(880674..882875)
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AA seq
733 aa
AA seq
DB search
MTDFTLTKDADGVAFVTWDAQGKSMNVLTREAFQEVSQLIDQALSDDEIKGIVITSGKEG
SFAGGMDLNTLATIRQEAGDEPAQALFDFVMGGHHILRKLELAGMDPKTKKGGKPIACAI
NGTCAGIGTEIALACHHRVMTSNPKSKIGLPEILLGIFPGGGGTIRYSRMVGAMAAAPVL
LEGKMMDPAKAKGAQLIDAVADDPVAAAKEWVLNAKDADLVKPWDAKGYKMPGGAPYHPA
GFMTFVGASAMVHGKTQGAFPAAKALLSAIYEGALVDFDTALKIEARWFTNVLMNPSSSG
MIRSLFLNKEALEKGAVRPKDVPDQRVKKIGVLGAGMMGAGIALVSAQAGMEVVLVDRDQ
EAADKGKAYTETYLDKGIKRGKVTAEKKEAMLARITATPDLDHLKGCDLIIEAVFEDMGV
KAEMTKKVEAIIPEDCIFASNTSTLPITDLAKASVRPDQFIGIHFFSPVEKMLLVEIIKG
KETGDRAVAKALDYVRQIRKTPIVVNDARFFYANRCIIPYINEGARMITEGVSPVLIDNA
ARQLGFPVGPIQLTDETSIDLGAKIARATKAAMGNAYPESPSDDLIFWMEEQGRLGRKAN
AGFFDYDEKGKRVEYWKGLQDKYPLAKDQPDLIKVQERLMFAQVLEAVRALEEGVLEDIR
EGDVGAILGWGFAPWSGGPLSWLDIIGTPYAAERCDQLAEKYGERFACPPLLREMAEKGQ
TFYGRFNPEAKAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttcactctgaccaaagacgcggacggcgtcgcctttgtgacctgggacgcc
cagggaaaatccatgaacgtgctgacccgcgaggcttttcaagaagtcagccaactgatt
gatcaggccctgagcgacgacgagatcaaaggtattgtcattacctcgggcaaggaaggc
tcgtttgccggcggaatggacctgaacacattggccactatccgtcaggaagccggggac
gaacctgcgcaggcgttgtttgatttcgtcatgggcgggcatcacatcctgcgcaagctg
gaattggcgggcatggaccccaaaaccaagaaaggtggcaagcccatcgcctgcgcgatc
aacggaacctgcgccgggatcgggaccgagatcgcactggcctgccatcaccgcgtcatg
acaagcaatccaaagtccaagatcgggctgcccgaaatcctgctgggcatcttccccggc
ggcggcggcaccatccgttacagccgcatggtgggcgccatggcggcggcccccgtactg
cttgaaggcaagatgatggacccggccaaggccaagggcgcgcagttgatcgacgcggtt
gccgacgatccggttgccgcagccaaggaatgggttctgaatgccaaggacgctgatctg
gtgaaaccctgggacgcgaagggctacaagatgcccggtggcgcgccctaccaccctgcc
ggtttcatgaccttcgtgggcgcgagcgccatggttcacgggaaaacacaaggcgccttc
cccgcggccaaagcccttctgagcgcgatctatgaaggcgcgctggtcgactttgacacc
gctttgaaaattgaagcccgctggttcaccaacgtgctgatgaacccgtcctcgtcgggg
atgatccggtcactgttcctcaacaaggaagcgcttgaaaaaggcgcggtccgtccgaaa
gatgtgcccgatcagcgtgtcaagaagatcggcgttctgggcgctggcatgatgggggcc
ggtatcgcgctggtttctgcccaagctggcatggaagtcgttctggtcgaccgcgatcaa
gaggcggccgacaaaggcaaagcttataccgaaacctatctggacaagggtatcaagcgc
ggcaaggtcacggccgaaaagaaagaggccatgctggcccgcatcacggcgacaccggat
ctggaccatctgaaagggtgtgacctgatcattgaagccgtgtttgaagacatgggcgta
aaggccgagatgaccaaaaaggtcgaagcgatcatccccgaggactgcatctttgcctcg
aacacctcgaccctgccgatcaccgatctggccaaggcaagcgtgcgtcccgaccaattc
atcggcatccacttcttctcaccggtcgagaagatgttgctagtcgagatcatcaagggc
aaggaaaccggtgatcgcgctgttgccaaggcgctcgactacgtgcgccagatccgcaag
acgccgatcgtggtcaacgatgcgcgcttcttctacgccaatcgctgcatcattccgtac
atcaacgaaggcgcacggatgatcaccgaaggcgtgagccccgtgctgatcgacaacgcc
gcacgtcagttgggctttccggttggtccgatccagctgaccgatgaaacctcgattgat
ctgggggccaagatcgcccgtgcgaccaaggccgccatgggcaatgcctatccggaaagc
ccctcggacgatctgatcttctggatggaagaacagggccgtctgggccgcaaggcaaac
gccggcttcttcgactatgacgaaaaaggcaagcgcgtcgaatactggaagggtcttcag
gataagtatccgcttgccaaagaccagcccgacctgatcaaggtacaggaacgcctgatg
ttcgctcaggttctggaagcggttcgggcgctggaagaaggtgtgctggaagacatccgt
gaaggcgacgtgggcgccattctgggctggggctttgcgccgtggtccggtggtccgctc
agctggctcgacataatcggtacgccctacgcagccgaaagatgtgatcagctggccgag
aagtatggcgaacgctttgcctgcccgccgctgctgcgtgagatggcagaaaagggtcaa
accttctacgggcgtttcaaccccgaagcaaaggctgcctga
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