Rhodomicrobium vannielii: Rvan_0965
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Entry
Rvan_0965 CDS
T01353
Name
(GenBank) nickel-dependent hydrogenase large subunit
KO
K06281
hydrogenase large subunit [EC:
1.12.99.6
]
Organism
rva
Rhodomicrobium vannielii
Pathway
rva00633
Nitrotoluene degradation
rva01120
Microbial metabolism in diverse environments
rva02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
Rvan_0965
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rvan_0965
Enzymes [BR:
rva01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
Rvan_0965
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Gene cluster
GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
ADP70241
UniProt:
E3I2F7
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Position
1073605..1075401
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AA seq
598 aa
AA seq
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MATISTPNGFTLDNSGKRVVVDPVTRIEGHMRCEVNVDDDNVIRNAVSTGTMWRGLEVIL
KGRDPRDAWAFTQRICGVCTGTHALTSVRAVEDALKIQIPENANIIRNIMQLTLQTHDHL
VHFYHLHALDWVNPVSALKADPVATSELQKKVSPHHPKSSPGYFRDVQNRLKKFVESGQL
GPFKNGYWSNPAYLLPPEANLMAVTHYLEALDFQTHIMRIRTIFGGKDPHPNWLVGGVPS
VINIEGPGASTSINMERLNMVRSIINQSIEFVENVYIPDLLAVAQFYKGWLYGGGLSSKN
VLSYGDIPDRANDYSAESLLQPRGAIINGNLKEVFPVDLRDPNEIQEFVPHSWYAYADEK
KGLHPWDGVTEPNFKLGPNLVGTRTNIKEIDESAKYSWIKAPRWKGHAMEVGPLARYVIG
YAKGDKEITEQLTLVLKTLDVPVSALFSTLGRTAARGLECQWAAHKMSYFLDKLIANVKA
GDTATANTASWDPSTWPAEVKGVGFTEAPRGALGHWIKIKNGKIENYQCVVPTTWNGSPR
DNEGNIGAFEAALLNTKVERAEEPVEILRTLHSFDPCLACSTHVMSEDGRELAEVTVR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgatcagcacacccaacggcttcacgctcgataacagcggcaagcgcgtcgtc
gtcgatcccgtaacacgcatcgaaggccatatgcgctgcgaggtgaacgtcgacgacgac
aacgtcatccgcaacgcggtgtcgaccggcaccatgtggcgcggcctcgaagtgatcctc
aagggccgcgacccgcgcgacgcctgggccttcacgcagcgcatttgcggcgtttgtacc
ggcacgcacgcgctcacctcggtgcgcgccgtggaagacgcgctgaagatccagatcccg
gaaaacgcgaatattatccgcaacatcatgcagctcacgctgcaaacgcacgatcacctc
gtgcatttctatcacctgcatgcgctcgactgggtcaacccggtttccgcgctgaaggcc
gatccggtggcgacgagcgagcttcagaagaaggtttcgccgcatcatccgaaatcgtct
cccggctacttccgcgacgtacagaaccggctgaaaaagttcgtggagtcgggccagctc
ggaccgttcaagaacggctattggtcaaaccccgcctatctccttccgccggaagcgaac
ctcatggcggtgacgcattatctggaagcgctcgactttcagacgcacatcatgcgcatc
cgcaccatcttcggtggcaaggacccgcatccgaactggctcgtcggcggcgtgccgtcg
gtcatcaatatcgaagggccgggcgcgtcgacctccatcaacatggagcgcctcaacatg
gtgcgctccatcatcaaccagtcgatcgagttcgtcgaaaacgtctatatccccgacctt
cttgcggtggcgcagttctacaagggctggctctacggcggcggattatcgtcgaagaac
gtgctgtcctacggcgatatcccggaccgtgcgaacgactactcggccgaaagcctgctt
cagccgcgcggcgcgatcatcaacggcaatttgaaggaagtcttccccgtcgatcttcgc
gacccgaacgagattcaggagttcgtgccgcattcctggtacgcctacgcggacgagaag
aagggccttcacccgtgggacggcgtcacggagccgaacttcaagctcgggccgaacctc
gtcggcacgcgcaccaacatcaaggagatcgacgaaagcgcgaaatactcctggatcaag
gcgccgcgctggaagggccacgccatggaggtcggcccgctcgcgcgctacgtcatcggc
tacgccaagggcgacaaggaaatcaccgagcagctgacgctcgtgctgaagacgctcgac
gtgccggtgtccgcgctgttctcgacgctcgggcgcacggccgcgcgcggcctcgaatgc
cagtgggcggcgcacaagatgagctacttcctcgacaagctcatcgccaatgtgaaggcg
ggcgacaccgccaccgccaacaccgcatcgtgggatccgtcgacatggcccgcggaggtc
aagggcgtcggcttcaccgaagcgccgcgcggcgcgctcggccactggatcaagatcaag
aacggcaagatcgagaattaccagtgcgtcgtgccgaccacctggaacggctcgccacgc
gataacgagggcaatatcggcgcatttgaagccgcgctcctcaacacgaaggtggaacgg
gcggaagagccggtcgagatcctgcgcacgctgcacagcttcgacccgtgccttgcctgc
tcgacccacgtcatgagcgaagatggccgcgagctggccgaagtcaccgtccgctaa
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