Rhodomicrobium vannielii: Rvan_2658
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Entry
Rvan_2658 CDS
T01353
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rva
Rhodomicrobium vannielii
Brite
KEGG Orthology (KO) [BR:
rva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rva03009
]
Rvan_2658
Enzymes [BR:
rva01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Rvan_2658
Ribosome biogenesis [BR:
rva03009
]
Prokaryotic type
ribosomal protein modification factors
Rvan_2658
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
ADP71870
UniProt:
E3I7F1
LinkDB
All DBs
Position
2892778..2894124
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AA seq
448 aa
AA seq
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MPKPVAERAASNAPKVGFVSLGCAKALVDSERILTRLRAEGYVISPDYDGADVVVVNTCG
FLDSAKAESLDAIGEAMAENGRVIVTGCFGVEDRRIRDSFPGVLAVTGPHQYDAVVNAIH
AAAPAPHAPFLDLVPRAGLRLTPPHYAYLKISEGCHNRCSFCIIPQLRGDLASRPAADVL
AEAEALVEGGAKELLVISQDTSAYGLDLKYTASDWRGSPVKARLTELCDALGSLGAWVRL
HYVYPYPHVDELLPLMAEGKILPYLDIPFQHASLSVLKAMRRPANQEKTLETIRRWREAV
PDLGLRSTFIVGFPGETEEDFAVLLDWLREAKLTRVGCFKYENVEGAPSRALDGQVPEDV
KAERFARLMEVQREVSAAVLAGQVGKTIDVIIDEVDEDGATGRGPWDAPEIDGSVLFEDA
GDMEPGDMVRATIIEADDYDLWAEPVAE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagccggtagcagagcgggccgcatccaacgcgcccaaggtgggatttgtcagc
ctcggctgcgcgaaggcgctggtcgactccgagcgcatcctcacccggcttcgcgccgag
ggctacgtgatctcgcccgactatgacggcgcggacgttgtcgtcgtgaacacctgcggc
ttcctcgacagcgcgaaagccgaaagcctcgacgccatcggcgaggccatggccgaaaac
ggccgcgtgatcgtcacggggtgtttcggtgtcgaagatcgtcgtattcgtgattcgttc
ccgggtgttctggccgtaaccggcccgcaccaatacgacgccgtggtgaacgcgatccac
gccgccgcgcccgcgccgcatgcgccgttcctcgatctcgtgccgcgcgccgggctccgc
ctcacgccgccgcattacgcgtatctcaagatctccgagggctgccataaccgctgctcg
ttctgcatcatcccgcagcttcgcggcgacctagccagccgccccgccgccgatgtgctc
gcggaagccgaagcgcttgtcgaaggcggtgcgaaggaattgctcgtcatcagtcaggac
acgagcgcttacggactcgacctgaaatacaccgcaagcgactggcgcggctcacccgtg
aaggcgcgactcaccgagctttgcgacgcgctcgggtcgcttggcgcatgggtgcggctg
cactacgtctatccttatccgcatgtggacgagcttctgccgctgatggcggagggcaag
atcctgccgtatctcgacattccgtttcagcacgcctcgctctccgtgctgaaggcgatg
cgccgccccgccaatcaggaaaagacgctcgaaaccatccgccgctggcgcgaggccgtg
ccggacctcggccttcgctcgaccttcatcgtcggcttccccggcgagacggaggaggat
tttgcagtcctgctcgactggctgcgcgaggcaaagctgacgcgtgtcggctgtttcaaa
tatgaaaacgtggaaggtgcgccgagccgcgcgctcgacggtcaggtgccggaagatgtg
aaggccgaacgcttcgcgcggctcatggaggtgcaacgcgaggtgagcgccgccgtgctc
gcgggtcaggtcggcaagaccatcgacgtcatcatcgacgaagtggacgaagacggcgcc
acggggcgcggtccgtgggacgcgccggaaatcgatggctcggtgctgttcgaggatgcg
ggcgacatggagccgggcgacatggtccgcgcgaccatcattgaggcggacgactacgac
ctgtgggcggagccggtcgcggaatag
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