Rahnella victoriana: J9880_03460
Help
Entry
J9880_03460 CDS
T07871
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rvc
Rahnella victoriana
Pathway
rvc00330
Arginine and proline metabolism
rvc00480
Glutathione metabolism
rvc01100
Metabolic pathways
rvc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
J9880_03460 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
J9880_03460 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
J9880_03460 (speF)
Enzymes [BR:
rvc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
J9880_03460 (speF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
CAGE1
Motif
Other DBs
NCBI-ProteinID:
UHM91431
LinkDB
All DBs
Position
complement(706591..708753)
Genome browser
AA seq
720 aa
AA seq
DB search
MKHLKLAASISVAPYLQTSRLVVDLRRADYADVAAIIISVGDLNHGRLAEIETLGFGIPA
FVAVQGTEQVSPEFLPSLKGVITLSDANQAFYAAQIESAAQGYEEALFPPFFDTLKKYVE
MENATFACPGHQGGEFFRRHPAGRQFYDFYGPNIFRSDMCNADVKLGDLLIHEGSAKDAQ
KYAAKVFSADKTYFVLNGTSAANKVVTNALLTRDDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPFGFIGGIDAACFDEAYLRQQIREVAPQRAEEKRPFRLAIIQLGTYDGTVYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKECSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDNHIKGQKRHCSHKKLNNAFMMHASTSPFYPLFAALDVNARIHAGGSGKHM
WMECVKLGIETRKMLLDQCSMILPFVPPVVAGKRWQDHETNEMANDVRFFDFVPGERWHA
FEGYAEKQYFVDPCKLLLTTPGIDASSGQYTQFGIPATILANYLRENGIVPEKCDLNSIL
FLLTPAETPAKMQLLVEELVRFEQYIEEDAPLSEVLPTVYRKNEDRYRNYTIRQLCQEMH
NLYVSFDVKELQKEMFREKSFPQVVMNAQDAHNEFIRDNIELIAIADAEGRIAAEGALPY
PPGVLCVVPGELWGGAVQRYFMALEEGINLLPGFSPELQGVYIEKKPVGWKRVMGYVVAQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacttaaaactagcagctagcatctctgtcgcgccttatctccagacctcgcgt
ctggtcgttgacctgcgccgtgcggattacgccgatgtggcggccatcattatttctgtc
ggcgatctgaatcacggcagactggcggagatcgaaacgctgggatttggcattcctgcg
tttgtcgctgtgcagggaaccgagcaggtttcgcctgagtttttaccgtcgctgaaaggc
gtgatcaccttgtcggatgccaatcaggcattctatgccgcgcagattgagtctgccgcg
cagggttatgaggaagcgttgttcccgccgtttttcgatacgctgaaaaagtatgtcgag
atggaaaacgccacatttgcctgcccggggcatcagggcggtgagtttttccgccgccat
ccggccggacgccagttttatgatttctacggcccgaacattttccgttccgacatgtgt
aatgccgacgtcaaactgggcgatttactgatccacgaaggctcggcgaaagatgcacaa
aaatatgccgccaaagtctttagcgccgacaaaacctatttcgtgctcaacggcacctct
gcggccaataaagtcgtgaccaatgcgctgctgacccgcgacgatctggtgttgttcgac
cgcaacaatcataaatctaaccaccacggtgcgttattgcaggcgggcgccacgccggtg
tatctcgaaacggcacgcaacccgtttggttttatcggcggcatagacgcggcctgcttt
gacgaagcgtatctgcgtcagcaaatccgggaagtggccccacagcgtgcagaggagaaa
cgcccgttccgtctggccattattcagctcggcacttatgacggcaccgtgtacaacgcc
cgtcaggtggtcgataaaatcggtcatttgtgcgattacatcctgtttgactccgcatgg
gtcggctatgagcaattcatcccaatgatgaaagaatgctcaccgttgctgctggagctg
aatgaaaacgatccgggcattattgtcactcagtcggtacacaagcagcaggccgggttc
tcccagacctcgcaaatccacaaaaaagacaatcatatcaagggacaaaagcgccattgc
agccataaaaagctcaacaatgcctttatgatgcacgcctcgaccagcccgttttacccg
ctgtttgccgcgctggacgtcaatgcgcgtatccatgccggtggcagcggaaaacatatg
tggatggaatgcgtgaagctgggtatcgagacccgcaaaatgctgctcgatcaatgttcg
atgattttgccgttcgtgccgccggtggtggccggtaaacgctggcaggatcatgagacg
aatgagatggccaacgatgtccgtttcttcgactttgtgccgggtgaacgctggcatgcc
tttgagggatatgcggaaaaacagtatttcgtcgatccgtgcaagctgttgctgaccacg
ccgggtattgatgcttccagcggtcaatacacgcagttcggcattccagcgactattctg
gcgaactatctgcgtgaaaacggcatcgtgccggagaaatgcgatctcaactctatcctg
ttcctgctgaccccggcagaaacgcctgccaagatgcaactcctggtggaagaactggtg
cgctttgagcaatacatcgaagaagatgcgccgctcagcgaagtgctgccgacggtgtat
cgcaaaaacgaagatcgttaccgcaactacaccatccgtcagttatgtcaggaaatgcat
aatctgtacgtcagttttgacgtcaaagagctgcaaaaagagatgttccgcgagaagagt
ttcccgcaggtggtgatgaatgcccaggatgcgcacaacgaatttatccgcgataacatc
gaactgatcgccattgcagatgcagagggcaggatcgccgcagaaggcgcgctgccgtat
ccgccgggcgtgttgtgtgtcgtgccgggagaattatggggcggggcagtacagcgttac
tttatggcgctggaggaagggatcaacctgctgccgggcttctcgcctgaattgcagggt
gtgtatattgagaaaaaaccggtcggctggaagcgcgtgatggggtatgtcgtggcgcag
tag
DBGET
integrated database retrieval system