Rahnella victoriana: J9880_08380
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Entry
J9880_08380 CDS
T07871
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
rvc
Rahnella victoriana
Brite
KEGG Orthology (KO) [BR:
rvc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
J9880_08380 (hmsP)
Enzymes [BR:
rvc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
J9880_08380 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
DUF4018
Motif
Other DBs
NCBI-ProteinID:
UHM92329
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All DBs
Position
1815354..1817336
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AA seq
660 aa
AA seq
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MRVRRSLTIKQMAAVSSIAAITICIFIVIQLFHFVQQRRDDYAQQLENIAHSVRVPLSQA
VLDVDLEETQDILNTLQPVGILSRADVVMPNQIAALHTHFPPGRPVPQWVTRGFNLPVTI
SVPLYSAAASPKDPKPLAYLVLQADSYRMYQFIVSALSTMLTTYLLLALILSISLSWIIN
RLIVKPLRSIASDLESLPESDVPHHQLTLPPRHEDDEIGMLVRSYNRNQQQREKARPPVT
EMLLPSEGALNSEEQFMQRLQHRLHGAELEKGFHLLLIGIESLRDDGHVDCPLISSIMEV
LPEHCLMARLSYNEFAVLAGDIPRPFMAMRLARHIMERINAPQESHAGNMSLHPTGSIGI
VQYTGEFPVSAQQLMVNARAARVSAYQQGKNQILFFEPELTAKIQKRLLQENEILHAMEQ
NDFTLFIQPQVNMKTGEVVGAEALLRRKMTDGSYGLESDFIVLAEEIGVMSLLGYKILEL
GCQILADWQRRGITLPLSVNLSGAQVQQRNFLPELRSLLSRYKINPGQLVLEITETARID
DLDRALLLLSELRAVGVSIELDDFGLGYSGLEYLNRLRSLPIDVIKIDRSFVSVLPDDEV
MVNIVASIGRAMNIQLVAEGVENEAQRRWLLKENIHIGQGYLFSAPLSKKEFERQFCQPS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtcaggcgttcactaacgatcaaacagatggcggcggtatccagtattgcggca
atcaccatttgtattttcatcgtcatccagctgtttcactttgtgcagcagcggagggat
gattacgcccagcaacttgaaaacatagctcattctgtccgggttccgctgtctcaggcg
gtgctggatgtcgatctggaagaaacgcaggatatcctgaacaccctgcaaccggtgggc
atattaagccgcgccgatgtcgtgatgcctaaccaaatcgccgcgctgcacacgcatttc
ccgcctggccgcccggtgccgcaatgggtcacccggggctttaatttaccggtgacgatt
tccgttcctctctattctgcggcggccagcccgaaagatcccaaaccgctggcttatctg
gtgttgcaggcagattcctaccgcatgtatcagtttattgtcagcgcgctgtcgaccatg
ctgacgacgtaccttttactggcgctgatcctgtcgatttccctgagctggattattaac
cggctgatcgttaaaccgctgcgcagcatcgccagtgatctggaatccctgccggaaagt
gatgtgccacaccatcagctgaccctgccgccacgccatgaagacgatgaaatcggcatg
ctggtgcgcagctataaccgcaatcagcagcagcgggaaaaagcccgtccgcctgtcacc
gaaatgctgctgccgtcagagggtgcgctgaacagcgaagaacagtttatgcagcgcctg
caacaccgtctgcatggcgcggagctggaaaaaggtttccatctgctgctgatcggcatt
gagagcctgcgcgatgacggccatgtcgattgtccgctgatctcatccatcatggaggtg
ctgccggagcattgcctgatggcgcgtctgagctacaacgagtttgcggtgctggcgggc
gatattccccggccctttatggcgatgcgtctggccagacacatcatggagcgcatcaat
gcgccgcaggaaagccatgcgggcaatatgtcgctgcatccgaccggcagtattggcatc
gtgcaatacaccggcgaattcccggtgagcgcgcagcaactgatggtcaacgcgcgggcg
gcgagagtgtcggcgtatcagcaggggaaaaaccagatcctgttctttgaaccggaactg
acggcgaaaatccagaagcgcctgttgcaggaaaacgaaatcctgcatgcgatggagcag
aacgacttcaccttgtttatccagccgcaggtcaatatgaaaaccggcgaggtggtcggt
gcggaagccctgttgcgccgcaaaatgacggacggcagttacgggctggaaagcgatttt
attgtgctggccgaagaaattggcgtcatgagtttgctgggatacaaaattcttgaactg
ggctgtcagatcctggcggactggcaacggcgcggcatcacgttaccgttgtccgtgaat
ctttccggtgctcaggtgcagcagcgtaatttcctgccggagctgcgcagcctgctgagc
cgctataaaatcaatccggggcaactggtgctggaaatcaccgaaacggcacgtattgat
gatttagatcgcgcgctgctgttactcagcgaactgcgcgctgtcggcgtttcgattgaa
ctggatgatttcggtctgggttactccggtctcgaatacctcaaccggctgcgttcgctg
ccgattgacgtgattaaaattgaccgcagtttcgtcagcgttctgcctgacgatgaagtg
atggtgaatatcgtggcctcgataggccgcgccatgaatattcagctggtggcggaaggt
gtcgaaaatgaagcccagcgccgctggctgctgaaggaaaatattcacatcggacagggg
tatttattctccgcaccgctttccaaaaaagagtttgaacgccagttctgccagccttcc
tga
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