Rhododendron vialii: 131304306
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Entry
131304306 CDS
T09330
Name
(RefSeq) ribosomal RNA small subunit methyltransferase, mitochondrial
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131304306
Enzymes [BR:
rvl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
131304306
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
131304306
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
UPF0020
PrmA
MTS
Ubie_methyltran
Methyltransf_18
CMAS
Methyltransf_23
PCMT
Methyltransf_4
Met_10
tRNA_U5-meth_tr
DREV
Spermine_synth
Methyltransf_15
DOT1
Methyltransf_24
NodS
MetW
Methyltransf_3
Cons_hypoth95
Methyltransf_28
Motif
Other DBs
NCBI-GeneID:
131304306
NCBI-ProteinID:
XP_058187495
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Position
10a:39573041..39574504
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AA seq
394 aa
AA seq
DB search
MLSRSKSLSVYVSRLILGRHNLLQLFHSKSSSGRRRHNLRDDEDSDKIRFQETKEHQEEG
YIRLLKSRGQHILTNPRVLDTIVRKSVIKPNDTVLEIGPGTGNLTLRLLQACEKVIAVEI
DKRMVEILRSRAAESGLEDRLTVICSDALKIEFPRFDLVVANIPYGISSPLVAKLVFGMN
QFRSATLLFQKEFARRLLANPGDSEFNRLAVNVKLVADVEFIMDVSKRDFLPCPKVDSSV
VKIWPKAQVPDVDLHEWWAFTRTCFGKKNKTLGATFKQKKKVMELYHLSGKSVCNDENIG
SWHHKGKFSHVEVDGDGASDEGGCSSFSCSGVEMSLFREKIVWVLQSNGFEDKRPSKLSN
EELLDLLSSFNQAGIYFNDHKRTRDANNAILATS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccgttcaaaatctctatcagtctacgtttccagactcattctcggccgacat
aatcttttacagctttttcattcaaagtctagtagtggtcgccgccgccataacctcaga
gacgacgaagacagtgataaaattcggttccaagagacaaaggaacatcaagaagagggg
tatatacgtctgttgaaaagcagaggtcagcacattctcacaaacccacgagttcttgat
accatcgttcgtaaatctgtcataaaacccaatgatacggtactagagatcggacccggc
acaggaaaccttactttgaggctcctccaagcttgtgaaaaggtcatagcagtcgagatt
gataagagaatggtggagattcttcgtagtcgagctgcagaaagtggacttgaggaccgg
cttacagttatatgcagcgatgcattgaaaattgagtttccaaggtttgatcttgttgta
gccaacattccctatggaatatcttcgcctctcgtggcgaagttggtctttgggatgaac
cagtttcggagtgcaacacttctctttcagaaggagtttgcacgacgcctattggccaat
cctggagattcggagtttaatcgcttagctgtaaatgtgaagctggtggctgatgtggaa
tttatcatggatgtaagcaagagggactttctaccatgtcccaaagttgattcatcagtg
gtaaagatctggcctaaagctcaagttccagacgtggatcttcacgagtggtgggccttc
acgagaacgtgttttggtaaaaagaacaaaacgttgggtgccacatttaagcagaagaag
aaggtgatggagctttaccatttatctggaaagagtgtctgcaacgatgaaaatattggc
agctggcatcacaaaggcaaatttagccatgttgaagttgacggagatggagcaagtgat
gaagggggctgctcttcgttttcttgctcgggagtagagatgagtttgtttagggagaaa
attgtttgggttcttcaatccaatggatttgaagataagaggccttcaaagctgtccaat
gaagagttgctggatttgctttcttccttcaatcaagctggaatatacttcaatgatcat
aaaagaacaagggacgcaaacaatgccatattggctacttcttaa
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