Rhododendron vialii: 131320812
Help
Entry
131320812 CDS
T09330
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131320812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131320812
Enzymes [BR:
rvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131320812
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
131320812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
131320812
NCBI-ProteinID:
XP_058207666
LinkDB
All DBs
Position
3a:complement(1451308..1472289)
Genome browser
AA seq
1666 aa
AA seq
DB search
MAHATEGVSESVEAVRFSFLTDEEVRKHSVVKITNPIFLDRVERPVPGGLYDPAMGPIND
QSPCKSCGQRAFHCPGHCGHIDLILPVYNPLLFHMLHNLLQSTCFYCLHFRASKSQVGKC
ASQLELIAKGDIVGAKRLDSVSPSESIDPEDSDGSHVSCTTVHSGAETDNSEDWNQGWTS
LQFTEAMLVLNKLLKLKTKECKNCEAKNPKITKPTFGWFHMMALSDENERANIIEGHKFG
GTLSGVTEEIPSSEVVNADDAESDSFTDITNVAEGSKQEKPGKSKRERVPRALIKQKNSI
SGPLLPSEVRDIVKRLWENEAHLCSFICDIEHQRFSIFGNRSGYTMFFIEALLVPPTKFR
PATKGGDNIMEHPQTVLLGKVLESNIALGNSHVNNLERSKIVNRWMDLQQSVNVLFDSKT
ATGQAKREFASGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFAL
RLTYPERLTPWNAGNLRDAIINGSEIHPGATHYVDKLSTVKLPPSKKTRISISRKLPSSR
GVVTQYGKSCDYEFEGKTVYRHLRDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHY
ANCNSYNADFDGDEINVHLPQDEISRAEGYNIVNANHQYIVPTRGDTVRGLIQDHIVSAV
LLTMKDTFLTQVQFNQLLYGSGLFGAACGSSSAKPNRKISTIYSEDLMLPVLPAVWKPKP
LWTGKQVITALLNNLTRDYTPFTVEKDGKIPSSYFGSRAGQSQPSKDGENEDNGEHRLLI
QKNELVHGVIDKAQFGKYGLVHTVQELYGSNTAGILLSALSRLFTVFLQINGFTCGVDDL
LILPRNDEQRKKELEGEDIGEKVHCDFFNFKPGTIGSMKLQTEIEKAIHNIGQSVVTTLD
LKMKNTLHDKTSNIHKDLLLKGLLKPFPKNSISLMTISGAKGSSVNFQQISSCLGQQELE
GKRVPRMVSGKTLPCFPAWDFSSRAGGFISDRFLTGLRPQEYYFHCMAGREGLVDTAVKT
SRSGYLQRCLVKNLECLKVCYDYTVRDADGSIIQFTYGEDGVDAHQTSFISQFKALAANQ
PILGKKFNHELEFNNYITKLPKRLKKEAKKYIKELEENKIPSELKKPKDLLNLVSQKYIS
SLAHAGEPVGVIAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASSDIKTP
IMTCPLLQNKLKKDAERLVKKVKVVTVADIIESMEVSLLPVPIEHHHVSRLYKLRMKLSE
SKVSSSDDYEETLEVWFLRELEDAIQNHLGLLSRINGIKNFVPELQSTASDGTDEDPSSN
NQREEDDDAVDDERGDDLGLDAEKRKKQATDEMDYEDGSEDEINEGETLDGKETDQGENE
GEVTEEGEIGALDDNEDDEASEMPDEQALPSKPSKSHDETTKAKAMGKKKVKAVLVRKDS
DRSIFVATNGLEFEVHFRFTTEPHILMLQIAQKTAKKVYLKSSGKINTCQAVKFANNDQV
LWEEGSNGKAQNKDGNAGPWALKTAGVDFLALWEMQDDLDVKRIYSNNIHAMLITYGVEA
ARETIIREIKHGFSSYGVEIDYRHLSLIAEFMTHSGGYRAMSRFGGIAESISPFLKMSFE
TATKFIVEAASHGLTDDLETPSSRICLGLPVKMGTGCFDLMHKLEI
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgcaactgagggtgtgtcagagagtgtggaggcggttaggttcagtttcctt
acggacgaggaggtgaggaagcacagtgttgtgaagattacaaaccccattttcctcgac
cgcgtggagaggcctgtcccaggaggtctgtatgatccggcaatggggccaataaatgac
caatcaccctgtaaatcatgtggacaacgtgcatttcattgcccaggtcattgtggtcat
attgaccttatcctaccagtctacaatccgttgctattccacatgctccataatcttcta
caaagtacttgtttctattgcttacattttagggcaagcaaaagtcaggttggaaaatgt
gcttcgcaattggaactaattgcaaagggtgacattgttggagccaaaaggttggattca
gtctcaccaagtgaatcaatcgatccagaggatagtgatgggagccatgtatcttgtact
actgttcattctggcgcagagactgacaactctgaggattggaatcaaggctggacctct
ctccagtttactgaagcaatgttagtattgaataaacttctaaagctaaaaacaaaagag
tgcaagaactgcgaggccaaaaatcctaagatcactaaacctacttttggctggtttcat
atgatggctttatctgatgagaacgagagagcaaacatcattgagggtcacaagtttggt
ggcacactcagtggtgtaactgaggagattccttcctctgaggttgtaaatgctgatgat
gctgaaagtgattcatttacggacatcactaatgtagccgaaggttctaagcaagaaaag
cctggaaaaagtaaacgggagcgcgtgcctcgtgcacttattaagcagaagaattcaatt
tcggggcctctcttaccatctgaggttagagacattgtaaagaggctttgggagaatgag
gcacacctctgctcttttatctgtgatattgagcatcagcgattcagtatatttggaaac
agatctggttacactatgttcttcatagaggcccttcttgttcccccaaccaagttccgc
cctgcaaccaagggtggtgataatatcatggagcatccccaaactgttctgctaggcaaa
gttctggagtccaacattgctttgggaaattctcatgttaacaatcttgaacgctcaaag
attgtcaaccggtggatggatcttcaacagtctgtgaatgtattatttgatagcaagact
gccacgggtcaagctaaaagagagtttgcttctggaatatgtcaattactggagaaaaag
gagggaatcttccgccagaaaatgatggggaagagggtcaattttgcctgccgatccgtt
atatctccagatccttatttggcagttaacgaaattggaattcctccatattttgcttta
agattgacctatccggagagattgactccctggaatgctggcaatttgagagatgcaatt
attaatggctctgaaatacatcctggggctacacattatgttgataaactgtcaactgtc
aaactacctccaagcaagaaaacacgtatctcgatttcaagaaaattaccttcttccaga
ggggtggttacacagtatgggaagagttgtgactatgaatttgaagggaaaactgtatat
cggcatttgcgggatggcgatgttgtgctggtcaatcggcagccaactcttcacaagcca
agtatcatggcacatgtagttcgtgtattgaaaggggagaaaactcttcggatgcattat
gctaattgcaattcctataatgctgattttgatggtgatgaaattaatgttcatctacct
caagacgaaatttcccgtgctgaaggttataatattgtcaatgctaatcatcaatatatt
gtcccaacgaggggtgatactgtcagaggcttgattcaggatcacattgtaagtgctgtg
cttctcacaatgaaagatacatttcttacgcaagtccagtttaatcagctcctctatggt
tctggtttgtttggtgctgcatgcggttcatcttctgccaaaccaaatcgaaaaatttct
actatatattctgaagatctgatgctgccagttttgcctgctgtatggaaaccaaagcct
ctttggactgggaaacaggtcattacagcactgcttaataatttgacgagagattacaca
ccatttactgttgaaaaagatgggaagatcccatcatcctattttggcagccgggctggt
caaagccaacctagcaaagatggcgaaaatgaagacaatggggaacataggttgttaatt
caaaagaacgagcttgtgcatggtgtgattgacaaagctcagtttggcaagtatggtttg
gttcatactgtgcaggagctttatggttcaaatactgcaggcattttgctttctgctcta
agtcgcttatttacagtgtttttgcagattaatgggttcacctgtggggtggatgacctt
ctgatattaccaagaaatgacgagcaaaggaagaaggaacttgagggtgaagatattggt
gaaaaagttcactgtgatttcttcaatttcaagcccggtaccataggctccatgaagctg
caaacggaaattgagaaagcaatccacaatatcggacaatctgtcgtaacaaccttggat
ttgaagatgaagaatacgcttcatgacaagacttctaatatccacaaagatctactgctt
aaaggattattaaaaccttttccaaagaacagcatttcgcttatgaccattagtggagct
aaaggaagttcggttaatttccaacaaatatcatcttgtctgggccagcaagagttagaa
gggaaacgagtacctcggatggtttctgggaaaaccctaccctgctttccggcatgggat
ttttcatctcgagctggaggttttatttctgatcgcttccttactggtcttcgtcctcag
gaatattatttccactgcatggctggtcgtgaagggttagtcgatacagcagtaaaaaca
tctcgtagtggatacctgcaaaggtgcctggtaaaaaatctagagtgcctgaaagtttgt
tatgactacacagtccgtgatgctgatggttctatcattcagtttacttacggagaagat
ggtgttgatgctcaccaaaccagttttatttctcaattcaaagcactggcagcgaatcaa
ccaatccttgggaaaaaatttaatcatgagcttgaattcaataattacattacgaagttg
cctaaacgtctcaagaaggaagcaaaaaagtacataaaggaattggaggaaaacaagata
ccttcggagctgaaaaagcccaaggacttactgaatttagtgagtcaaaaatacatatct
agtcttgcacatgcaggggaaccagtcggtgtaattgctgctcaatctgtaggtgaacca
tcaacccagatgacgcttaacaccttccatcatgctgggcgtggagaaatgaacgtgaca
cttggtattccacgtttacaggagattttgatgactgcgtcaagtgatatcaagactcct
ataatgacatgtccattgctacagaataagttgaagaaggatgctgagcgccttgtgaaa
aaagtgaaggtggtcactgttgcggacattatagagagcatggaagtaagtcttttgcca
gtacccattgaacatcaccatgtatctaggttatataaacttaggatgaagctctctgaa
tccaaagtgtcttcatctgatgactatgaggaaaccctagaagtttggtttctaagagaa
ctggaagacgccatacaaaatcatttgggtttactctccagaatcaacggcataaaaaac
tttgtgccagagttgcaatcaacagcatcggatgggacagatgaggatccttctagcaac
aaccaacgggaggaagatgatgatgccgttgatgacgaaaggggtgatgatctgggtttg
gatgcagaaaaaagaaaaaagcaagcgacagatgagatggattatgaggatggttccgaa
gatgaaatcaatgaaggggagactttggatggtaaagaaacagatcaaggggagaacgaa
ggggaggttacagaggaaggtgaaattggagcattagatgataatgaagatgatgaagcc
tctgaaatgccagatgagcaggcattgccctccaagcctagtaaatcacatgacgaaact
accaaagcaaaagcgatgggtaaaaagaaggtgaaagccgtgctagttagaaaggactct
gatagatcaatcttcgttgctacaaacggattggaatttgaggttcatttcaggtttacc
accgagcctcatattttgatgcttcagattgctcagaagactgccaagaaggtctatctc
aagagctccgggaagatcaatacgtgtcaagcggttaagtttgctaataatgatcaagtt
ctttgggaagaaggcagtaacggcaaagcacaaaacaaggatggcaatgcaggcccgtgg
gctctgaagacggccggagtggatttcttggcgctttgggaaatgcaagatgaccttgac
gtcaagcgcatatattccaacaacatccatgctatgctaatcacttacggagtggaagct
gcgagggaaaccatcattagggagattaagcacggatttagtagttacggcgtggaaatt
gattaccggcatttgtccctaattgcagagtttatgacgcattcaggcgggtaccgtgcg
atgagtcgttttggggggatagcggagtctatatcccctttccttaaaatgtctttcgaa
accgcaaccaagttcatcgtcgaagcagcgtctcacgggttgacggacgatttggagacc
ccgtcgtctaggatctgccttggcttgccggttaagatggggacaggttgttttgaccta
atgcataaactagagatctga
DBGET
integrated database retrieval system
