Rhododendron vialii: 131327311
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Entry
131327311 CDS
T09330
Name
(RefSeq) PWWP domain-containing protein 1-like isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00270
Cysteine and methionine metabolism
rvl01100
Metabolic pathways
rvl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
131327311
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131327311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rvl03000
]
131327311
03032 DNA replication proteins [BR:
rvl03032
]
131327311
03036 Chromosome and associated proteins [BR:
rvl03036
]
131327311
Enzymes [BR:
rvl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
131327311
Transcription factors [BR:
rvl03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
131327311
DNA replication proteins [BR:
rvl03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
131327311
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
131327311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
131327311
NCBI-ProteinID:
XP_058216398
LinkDB
All DBs
Position
5a:complement(28471672..28478145)
Genome browser
AA seq
1134 aa
AA seq
DB search
MISAMRDKGLELDRNSDSIPDVPLGKARVSADVGSDSDASGAEVGVLEELESNRAYDSDF
GSRVSVAEGRVSVGGESERHRVLEGDERRDSDFRNDDLGRVVDDRRRGEKGRALESRWSR
VGSDEFDTKEKGVGSRASVRKSNVSTFDDFVANGKGEVTGVGLSTSVGYGYEIGDMIWGK
VKSHPWWPGVIYNESFASPSVRRTKSEGHVLVAFFGDSSYGWFEPEELIPFESNYSEKSR
QTNSRTFVKAVEDAVDEVNRRSGLGLACRCRNPYNFRPGNAQGYYAVDLNDYETGAVYSV
SQIRKARESFQPRDTVAFIKQLALIARDEVYTSIYFVKNKATALAYRKAVFEEFDETYAQ
AFGQQPVRPSRESLAAVAQPVRAPLSGPMVMAEALGKRRKNSTKPSKLKEHENKEKYLFK
RRDEPSEVKIHQKGQGAFSRQVEGSAASMVEPPFTFAETSSWGQASNSSFDNGKGALLES
KGGDGTMNLKHDRQRATTSGLDEDFHQPPSLPDTNDEGKRVSREIDPKLHGQDPRAHIVT
GKKKAKLLKRPVGELGVEKSASGEKKKRKIEIGIKTSSDLGVEKSAPGEKKKKQKKKIEF
GSETSSDLGVEKSAPGEEKKKKKQEMEFCVERSSDLMQNQSATGKSGTISSLLPDSIGKR
STFGMGDTDLKLPQLLGDLQALALNPFHGVDMSISPTVQKAFLKFRSIVYEKSFSPAETE
ANEVHASKSAAGSSGAFEVPSRGIKELPSPKHPKPLIRPDDPTKGGRKRGPSDRQEEMAS
KRMKKVEELKSLAVEKKAAQIPLEIHRDGKEAVAIRPPKLLKPDSIKKTTESPSKARVPT
MLVMKFPPNTNLPSGSELKARLARFGPLDHSATRVFWQSFTCRVVFLYRADAEAAHKHLS
GSNSLFGNVNVKSSIRTTGAMGPDSEGKAQREDAVEQKPPKPQPVVQLKSCLKKAAGEEA
AGAVTTGGGSNGNGSSRGTPRVKFVLEGGESSGGGGGEQLIVGTNKNNYFNNTTSFADVG
GKSSSSSSSSSHGMEFNTRNFQKGILPLPPATAKLPNTSNNMGYGEVEPRNTHNFSANMA
RAGPSPTNIDIAQQMLVPPTKIDIAQQMLGLLTKCNDLVTNVSSFLGYVPYHPL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagcgatgcgcgacaagggtttggagttggatcgaaactccgattcgatccca
gacgtacctctaggaaaagctagggtttcggctgacgtcggctccgatagtgacgctagt
ggtgcggaggtcggggttttagaggagctcgagagtaatcgagcttatgatagtgatttt
ggttctagggtttcggttgcggagggcagagtttcggtgggtggtgaatctgaaagacat
agggttttggagggtgatgagagaagggattctgattttcgaaacgatgatttgggacgg
gtggtggatgaccgtagacggggggagaagggaagagcgctggagtcacggtggtctagg
gtggggagtgatgagttcgataccaaggaaaagggtgttggttcgagagcaagtgtccgc
aagtcgaatgtttcaacgtttgatgatttcgtggctaatgggaagggcgaggtgacgggg
gttgggctgtcgacctctgtgggttatggttatgaaataggggatatgatttgggggaag
gtgaaatcacacccgtggtggccgggtgttatttataatgagtcatttgcatcgccttca
gttcgtcggacaaagagtgaaggtcatgtgttggttgctttctttggtgacagtagctat
ggatggtttgagccagaagagctcattccatttgaaagtaattactctgagaagtcgagg
caaacgaattcgagaacttttgttaaggctgtggaagatgcagttgatgaggttaaccgg
agaagtggtctgggtttggcttgccgctgcaggaacccatataattttaggccgggtaat
gctcaaggatactatgctgttgatttgaatgattatgagactggagcggtttactccgtc
agtcagattaggaaagccagagagagttttcagccgagagatactgttgcttttatcaag
cagttggcattgattgctagagatgaggtgtataccagtatttattttgtcaagaataag
gctactgctttggcttatcgaaaagcagtgttcgaggagtttgatgagacctatgctcaa
gcatttggtcagcagccggtgcgtccttcccgtgaatcattggcagcagttgctcagcct
gttagggctccattgagtgggccaatggtgatggcagaggccttgggtaagcggagaaag
aactctacaaaacccagtaaattgaaagagcatgaaaataaagagaaatacctctttaaa
aggagagacgaaccaagtgaggtgaaaatccaccaaaaggggcaaggagcattctctagg
caagtagaggggtctgcagctagtatggttgagcccccttttacctttgctgagacttct
tcatgggggcaggcttcaaattcttcttttgataatgggaagggtgctctgctggaatca
aaaggtggtgatgggacaatgaacttgaaacatgatcgtcaaagggcaactacatcgggg
ttagatgaagacttccatcaacctccaagtctaccagatacaaatgacgaaggaaaacgt
gtttcacgggagattgatccgaagcttcatggtcaggatccaagagcgcatatcgtcact
gggaaaaagaaggccaagcttcttaaacgtcctgttggggaactgggtgttgagaaatct
gcctcaggagaaaagaagaagagaaagatagaaattggtatcaaaacatcctctgatctg
ggtgttgagaaatctgccccaggggaaaagaagaaaaaacagaagaaaaagatagaattt
ggtagcgaaacatcctctgatctgggtgttgagaaatctgccccaggggaagagaagaag
aaaaagaagcaagagatggagttttgtgtcgagaggtcctctgatctcatgcagaatcaa
tctgctactgggaaaagtgggacaattagttcattgttgcctgattctattgggaagcgg
tcaacatttggcatgggtgatactgatctcaagcttccacagttactgggtgatttgcaa
gctctggccctcaatcccttccatggggtggatatgagtatttctccaactgtacagaag
gcctttttgaaattccggtcgattgtttacgagaaaagcttttccccagctgagactgag
gcaaacgaagttcatgcctcgaaatcggcagctggcagttctggggcttttgaagttcca
tcccgagggattaaagagctgccatctccaaaacacccgaagcctctaatcaggcctgat
gacccgacaaaaggcggccggaaacgtggcccgtctgatcgtcaagaggaaatggcctca
aaaaggatgaagaaagtagaggagttgaagtctctggctgttgaaaagaaggctgctcaa
atacccctagaaatccatagagatggaaaagaagcagtggctattagaccgccgaaacta
ttgaaaccagattctatcaagaaaacaaccgagtccccatcaaaggcacgtgtacctaca
atgttggttatgaagtttcctcccaatacaaacctcccatccggatctgagcttaaggct
aggctagctcgttttggtccgttggatcattcggccacccgggttttctggcagtctttc
acatgccgtgttgtctttctttatagagctgatgctgaggctgcacacaagcatctttcc
ggaagtaattccttgtttggcaatgtgaatgtgaaatccagcatccggacaacgggagca
atgggacccgattcggaaggcaaagctcaaagagaagatgcagtcgaacaaaagcctccg
aagccgcagccggtggttcagctcaagtcatgtctgaagaaggcggcgggcgaggaggcg
gcgggggcagtcaccaccggtggcggcagcaatggtaatggtagcagtagagggacccct
cgtgtaaaatttgtgttggagggtggagagagtagtggcggtgggggtggtgagcaattg
atagttggtactaataagaacaactacttcaacaatacaactagttttgctgatgttggt
ggtaaatcttcttcttcttcatcatcatcatctcatggaatggaatttaatactaggaat
tttcaaaagggcattctacctcttcctcctgctacagcaaaacttccaaacacttcaaat
aatatgggctatggtgaagtagaacctagaaatactcacaattttagtgccaatatggct
cgggctgggccaagcccaacaaacatagacattgcccaacaaatgctcgtgcccccaaca
aaaatagacattgctcaacagatgctcggccttctcaccaagtgtaatgatctagtaacc
aacgtgagtagctttctgggttatgtaccctatcatcccctctga
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