Rhododendron vialii: 131330326
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Entry
131330326 CDS
T09330
Name
(RefSeq) ornithine decarboxylase 1B, chloroplastic-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00330
Arginine and proline metabolism
rvl00480
Glutathione metabolism
rvl01100
Metabolic pathways
rvl01110
Biosynthesis of secondary metabolites
rvl04148
Efferocytosis
Module
rvl_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
131330326
09106 Metabolism of other amino acids
00480 Glutathione metabolism
131330326
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131330326
Enzymes [BR:
rvl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
131330326
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
131330326
NCBI-ProteinID:
XP_058219857
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Position
6a:complement(1410233..1420615)
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AA seq
684 aa
AA seq
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MAIAFPASIAPAAVATMAAPSCFSEDLMARQGSGVVAGLAVAVILEAVTVVGFTAVRDGM
TTAAEVTAIFSERIFLGAIRSLFVYVVDLKTGENREQVDFNMVLVVVEVCSLLRDRLRAG
TRKFVQGLLLGRGIRATKKDMVLGMRLHPEGLQLGFRVLKQVSASVFQVQLCDAASATLV
EIKAGIDNGSIDTMARALNTFSIGDYVRSQCCMAHQINFMPSGARSRQHLSCMEFLYVAE
EGGFLLGVPKQHNKFQTHLLCKTLPFFSPAMVSNPKSLQIIMGAPGVKGKKMTALPEDGL
TDLILSVISKRQEFKEPFYVLDLGVVASLMEKWSRSLPSVRPFYAVKCNPDLAFLGAMAA
LGSSFDCASRAEIEAVLSLGVSPDRVVYANPCKAESHIKYAAAVGVNLTTFDSKDEVEKI
RKYHPKCALLIRVKAPDDGGARCPLGPKYGALPEEVTTLLQAAQAAKLTVSGVSFHIGSG
ATNSSAYRAAIAAVKTVFDTATRLGLPKMHVLNIGGGFTAGPDFDDAANAVKSALQEYFK
NEPGLTVISEPGRFFAESAFTLATNIIGKRVRGELREYWINDGVYGSMNCILYDHASVDA
TPFACTSNCGNPTCRGMRTYPSTVFGPTCDALDTVLTGHQLPELQVNDWLVFPNMGAYTA
AAGSNFNGFNTAAITTHLVYSNLS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgcgtttcctgcaagcattgcaccagctgcggtggcaaccatggcagcgccg
agttgttttagtgaggatttgatggcgaggcaggggagcggggtggtggcgggtttagcg
gtggcggtgattcttgaggcggtcacggtggtgggttttacggcggtgagggacgggatg
acgacagcggcagaggtgacagccattttttcggagaggatttttttgggagcgataagg
tcgttgtttgtgtatgtggtggatttgaaaacaggggaaaacagagagcaagtggatttt
aatatggtacttgtggtggtggaggtgtgttcacttttaagggatagacttagggccggc
acaaggaagtttgtgcagggcttattgttaggaagggggatacgcgcgacaaagaaagat
atggtgcttggcatgaggcttcatcccgaggggctgcagcttgggttcagagtgttaaaa
caagtctccgcctctgtatttcaagtccagctttgcgatgcagcttcggcgactttggtg
gaaatcaaagctgggatcgataatgggagcattgacacaatggcacgtgcactgaataca
ttttctattggtgactacgttaggagtcaatgctgcatggcccaccagataaatttcatg
ccatctggtgcgagatcaaggcaacacctctcatgcatggaattcctatatgttgctgaa
gagggggggtttttgctgggcgtgccaaagcaacacaacaagtttcaaacccatctgctt
tgtaaaacactcccatttttttccccagccatggtttcgaaccctaagagcctccaaatc
ataatgggcgcaccaggggtgaaagggaagaagatgacggccctaccggaagacggcctg
acggatctcatactatccgtcatctccaagaggcaagaattcaaagaacccttctacgtg
cttgacttgggtgtggtggcgtctctcatggagaaatggtctcgcagcctcccgtccgtc
cgtcctttctacgccgttaaatgcaaccccgacctggctttcctcggagccatggccgcc
ctcggctcaagcttcgactgcgccagccgggccgagatcgaagctgttttgtccctcgga
gtttctccggatcgtgtcgtttacgctaacccgtgcaaagccgagtctcacatcaagtat
gccgccgcggttggtgttaacttgaccacgtttgattcaaaagacgaagtcgaaaagatc
cgtaagtatcacccgaaatgcgcgctgctcatccgggtgaaagccccggatgacggtggc
gccagatgcccgcttgggccaaagtacggcgcgctcccggaagaagtcacaacgctcctt
caagcagcccaagccgcgaaactaaccgtctcgggcgtctcattccacatcgggagcgga
gccaccaattccagcgcttaccgagccgcaatagccgctgtgaaaacagtctttgacacg
gctacacggctcggcttgccgaaaatgcacgtgctaaacatcggtggcggtttcacagcg
ggaccagatttcgacgacgctgcaaacgccgttaaatcagcccttcaagagtacttcaaa
aatgaaccgggcctaactgtcatttccgaaccggggaggtttttcgccgagtcggctttc
actctagcgaccaacataatcgggaagcgcgtgaggggggagctgagggagtactggata
aacgacggcgtttacgggtccatgaactgcatactctatgaccatgcctcggtcgatgcg
acgccatttgcgtgcacgtcgaactgtggcaaccccacttgtcgggggatgaggacttac
ccttcgacagtgtttgggccgacgtgcgacgcccttgacacggtgttgacgggtcaccag
ttaccggaattgcaggtgaatgattggctggtgtttccaaacatgggggcgtatacggcg
gcggctggttccaacttcaatggatttaacacggcggcaatcacgactcacctcgtgtac
tccaatctcagctaa
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