Rhagoletis zephyria (snowberry fruit fly): 108361565
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Entry
108361565 CDS
T08513
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108361565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108361565
Enzymes [BR:
rze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108361565
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
108361565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
108361565
NCBI-ProteinID:
XP_017469700
LinkDB
All DBs
Position
Unknown
AA seq
1377 aa
AA seq
DB search
MPKEQFREADVIKKISHVQFCISSPEEIQQESHLRIVSKNLYQGQRQPVPYGVLDKRMGV
STKDATCDTCGQGLNECIGHFGYLDLALPVFHIGHFRATISILQMICKSCSHVMLREPDK
RAYEKKLLNPNLSYLAKKALHGQILTKAKKQAKCPDCEAPNGGVKKGPGLLKILHDPCKG
KKPDAIMTDALNELLQATENNRELQQMLTTYNQVEELNPLTVLELFKTIPKSDIPLLGMT
SDNASPANLIVTRVFVPPVCIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQKHMTGGG
KIELIQEDWDFLQLHVALYFHSEISGIPLNMAPKKTTRGIVQRLKGKQGRFRGNLSGKRV
DFSGRTVISPDPNLMIHQVGVPERVAKILTYPERVNPANVQKMKELVKNGTQKHPGANYV
QQRGSTFKKYLAYGNRDKVAHDLKCGDIVERHLSDGDIVLFNRQPSLHKMSIMCHQAKVQ
PQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARAEALILMGNKSNLITPKNGEILIAA
TQDFITGGYLLTQKDEFLTKEQAMQLAACFLAGPDANMRIDMPPPAILKPRKLWTGKQIF
SLLLRPNKQCPVKTNLITKGRNYTSNYDLCVRDSWVIVRNSELICGSMDKSTLGSGTKNC
IFYVILRDFGELYATKCMWRLARIASFFIQNRGFSFGISDVTPSNKLLEEKQKLLERGYA
KCDEYILEMKKGTLQCQPGCTPEQTLEAVMLRELSSIREQAAKACFRELHPTNSALIMAL
SGSKGSNINISQMIACVGQQAINGKRVPNGFENRALPHFEKFSAIPAARGFVQNSFYSGL
TPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGSVRNAIGEIVELIY
GGDGLDPVFMEVKNKPVDMVRQLNHLRAIVPDRKGTPLPASEIPPVARKIISEDEFTMSR
KDFQNEIISFIDKVAQKIAGVQAKYRRHPKLAHEIERLTEEQIRTFMRWVNDKYNRAVTE
PGTAVGAVAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAE
IENNISMEFARKVKSRIEKTTLGEISSYIEEVYRSDDCFLVIRLDLNRIKVLGLEINAET
VRYSICTSKLRIKPALVDVVGASVITVHIDTSKHGASLNAELQRLTISIQNVVVAGLPNI
SRAVIAIDDAHSPPTYKLCIEGAGLRDVMATFGVVGARTKSNNIWEVYNTLGIEAARTTI
MTEITDVMEGHGMTVDHRHVMLLASQMTSRGEVLGITRHGLAKMRESVFNLASFEKTADH
LFDAAYFGQTDAVDGVSERIILGMPASIGTGLFKLIHNHEDTALPEVDPPLFHAVTA
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagaacagttccgcgaagctgacgttatcaagaaaatttcccatgtgcagttt
tgcatcagcagtcctgaggaaatccaacaggaatcacatttacgcatcgtttcaaaaaac
ctgtatcagggtcaacgtcaaccagttccttatggcgtgctggacaaacgcatgggcgtg
agcaccaaagacgccacctgcgacacatgtggccaaggtctgaatgaatgtattggacat
ttcggttatttagatctcgcgttgccggtattccacattggtcattttcgagcaacgatt
tcaattttgcaaatgatttgtaaaagttgctcgcatgtaatgcttcgagagccggataag
cgcgcatacgaaaagaagcttctaaatccgaacttgtcatatttagcaaaaaaggccttg
catggacaaattttaactaaggccaagaaacaagcaaaatgtcccgattgcgaagcgcca
aatggtggcgtaaagaaaggtccaggcttactaaagatcttacatgatccctgtaagggt
aaaaagccagacgctatcatgactgatgcgctaaatgagttattgcaggcgacggaaaat
aatcgcgagctgcagcaaatgttaacaacatacaatcaagtggaggagttaaatccctta
acagttttggaattgtttaaaactatacccaaaagcgatataccattgctcggcatgact
tcagataacgccagcccagcaaatctaattgtaacacgcgtttttgtaccgcctgtctgc
attagaccttcggtgctgtccgaagttaaggcgggaaccactgaagatgatttaacaatg
aaacaaagtgaaatcttgctcatcaacgatgtcatacaaaagcatatgactggtggtggc
aagatcgagctcatccaggaagattgggactttttacaattgcacgtagcactgtatttt
cacagcgaaatctctggtataccgctgaatatggcgccaaagaaaacgacacgcggtatt
gtgcaacgtttgaaaggcaagcagggtcgctttcgtggcaatctgtcaggcaaacgtgtg
gacttctctggacgaactgttatctcacccgatcctaacttaatgatacaccaagtgggc
gtaccagaacgtgttgccaagatacttacctatccagagcgtgtcaaccccgcaaatgta
caaaaaatgaaagaactggtcaaaaatggtacacaaaagcatccaggcgcaaattacgtg
cagcagcgtggttcaacattcaaaaaatatctggcctatggtaatcgggataaagttgca
catgatctaaaatgtggcgacattgttgagcgtcatttaagcgatggcgatatagtactc
ttcaatcgtcaaccttcactacataaaatgtccattatgtgtcaccaggctaaggtgcaa
ccacagcgcacattccgcttcaacgaatgcgcatgcactccttacaatgctgattttgat
ggtgatgaaatgaatttgcacttaccacaaacagaggaggcacgtgccgaggctttaata
ctcatgggcaacaaatctaatttgataacaccgaaaaatggcgaaatacttatagcagcc
acacaagatttcattacaggcggctacttgctaacacaaaaagatgaatttctaaccaag
gagcaggcaatgcaactggcagcttgtttcctagctggacccgatgctaatatgcgcata
gatatgccacctccagcaatattaaagccgcgcaaactctggacaggcaaacaaatattc
agcctactgctgcgtccgaacaagcaatgcccagtgaagacaaatttaataacaaaaggt
cgcaactacactagtaactatgacttgtgtgttcgagattcgtgggtaattgtgcggaac
tcagagcttatttgtggttcaatggacaaaagtacgctgggttctggaacgaaaaattgc
atattctacgttatattgcgtgattttggggaactctacgctaccaaatgcatgtggcgt
ttagcgaggatcgcttcatttttcatacaaaatcgtggcttctcttttggaatcagcgat
gttacacctagcaataaactgcttgaggaaaaacaaaaattgttggaaagaggctacgcc
aaatgcgatgaatacattttagagatgaaaaagggtacattacaatgtcagcccggttgt
acgccagaacaaacgctcgaagcagtaatgttgcgtgaactctcctcaattcgcgaacag
gcagctaaagcttgcttccgtgaactacatcccacaaacagtgcacttattatggcacta
tccggttcgaaaggttccaacatcaatatttcacagatgattgcctgtgtcgggcagcag
gccataaacggcaagcgtgtgccaaatggatttgaaaatcgtgcgctgccacatttcgag
aagttctcggctataccggcggcgcgtggttttgtgcaaaatagtttttactctggcctt
acgcctacggaattcttcttccacacaatggctggtcgtgaaggtttggtcgatacagct
gtaaaaacggcggaaactggttatctccagcgtcgtttggtgaagtgtctggaagatctg
gtagtgcattacgatggctccgtacgcaacgcaattggtgaaatagtcgagcttatttac
ggtggtgacggtttagatccggttttcatggaagttaaaaacaagccagtggatatggtg
cgtcaattaaatcatttgcgcgccattgtaccggatcgcaagggtacaccactacctgca
tctgaaattccgcctgtagcacgtaaaattatttcagaagacgaattcaccatgagccga
aaagattttcaaaacgaaattatctccttcattgataaggtggctcaaaagatcgctggc
gtacaagcaaagtacaggcgacatccgaaattagcacatgaaattgaacgtctcaccgaa
gaacaaattcgtactttcatgcgttgggtaaacgacaaatacaatcgcgctgtcactgag
cctggcactgctgtaggggctgtagcggcgcaaagtatcggtgagccgggcacacaaatg
acattgaagacgttccattttgctggtgtcgcctccatgaacattacacagggtgtaccg
cgtatcgttgagattataaacgctaccaaaaccatttcaacgccaattataacagcggaa
attgagaataacattagcatggaatttgcgcgtaaagtaaagtcgcgcattgagaagacc
acgttaggggagatttcatcgtacattgaggaagtttacaggtcagatgactgcttctta
gtcatacgtttagacttgaatcgtattaaagtattaggcttagagattaacgccgaaact
gtacgttattcgatttgcacctcaaaactacgaatcaagccagcgctagtggatgttgtc
ggcgcgtcagtgatcacagtacatattgatacctcaaaacatggtgcctcactcaatgct
gagctacaacgtctaaccatttccatacaaaatgttgtcgtagctggtttgccgaacatc
tcacgcgctgtcattgctatagacgacgcacactcaccgcccacctataagttatgcatt
gaaggcgctggtttgcgtgatgttatggccacattcggcgttgtgggcgcacgcaccaaa
agtaacaacatctgggaagtgtataatacgttgggtattgaggcagcgcgtaccactatt
atgactgaaatcacagatgtaatggagggccacggcatgactgtggatcatcgtcatgta
atgttgctggcaagccagatgacgtcacgtggtgaagttttgggcataactcggcatggt
ttggcgaagatgcgagagtctgtattcaatttagcatcgttcgaaaaaaccgccgatcac
ctattcgatgccgcgtactttggccaaaccgatgctgttgatggcgtctccgagcgtatt
atcctaggcatgcccgcctcaattggtaccggactctttaagcttatacacaatcacgag
gacaccgcgttgccggaagtggatccgccattatttcatgctgtaacagcgtga
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