Rhagoletis zephyria (snowberry fruit fly): 108367167
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Entry
108367167 CDS
T08513
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rze03016
]
108367167
Enzymes [BR:
rze01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
108367167
Transfer RNA biogenesis [BR:
rze03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
108367167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
108367167
NCBI-ProteinID:
XP_017477251
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MTLGDIEDLTKELTTAATNDEAAINFKVRVHPRYRKEDLEDEAETKDEDTSNPNTTTEYR
SFLPGKYSIFLKTWGCTHNSSDSEYMAGLLSQAGYRIVEDRAAADLWLLNSCTVKNPAED
HFRNEITAATAAGKRLVVAGCVPQSDYRKEPAYLRRLSIIGVQQIDKVVEVVEQTLQGNT
VRYLSMAKDRDGSGRKTGGASLAMPKVRRNPLVEILSINTGCLNECTYCKTKHARGKLGS
YRPEEIVSRAVAAFAEGVRELWITSEDTGAYGRDIGTNLPALLSELVKVIPSGCRLRIGM
TNPPYILEHLEAMAAILRHPRVYAFLHIPVQAGADEVLADMKRQYCIDDFCTIVDFLKQR
VEGITIATDIICGFPTETAANFEESLRLIERYRFPVLFINQFYPRPGTPAAKMRRVPTAE
VKRRSKAASELFQAIQPYEGRVGARYRGVLITEEAADGRHLVGHNKCYEQILLEKGAEGV
AMGALIDEVEIVSTGKYYMIGRPISPSIISKLMAKVEQHQHQNLLFTASALLLAAALLYR
GYRHFTG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgacgttaggcgacattgaggatctcacaaaggagctgacgacagccgcaaccaatgat
gaagccgcaatcaacttcaaagttcgcgtccatcctcgctaccgaaaggaggatctggag
gatgaagcagaaactaaagatgaggacacctcaaaccccaacaccaccactgaataccga
agctttcttccgggaaaatattccatcttcctcaaaacctggggctgcacgcacaacagc
tcggacagcgagtacatggccggactgctctcgcaggcgggctatcgcatcgtcgaggac
cgtgccgccgccgacctgtggctgctcaacagctgtacggtgaagaaccccgcggaggac
cactttcgaaatgagatcaccgcggcgacggccgccggcaagcgactggtggtggccggc
tgcgtgccccagtctgactaccgcaaggagcccgcctaccttcgccgcctgagcatcatc
ggcgtccagcagatcgacaaggtggtggaggtggtggagcagacgctgcagggcaacacc
gtccgctacctgagcatggccaaggaccgggacgggagcgggcggaagacgggcggcgcc
tcgctggcgatgcccaaggtgcgccgcaacccgctcgtggagatactgtccatcaacacc
ggctgcctgaatgagtgcacgtactgcaagacgaagcacgcccgcggcaagctgggcagc
taccgaccggaggagattgtcagcagggcggtggccgcctttgccgagggcgtccgcgag
ctgtggatcaccagcgaggacacgggcgcctacgggcgagacattggcaccaacctgccg
gcgcttctaagcgagctggtgaaggtcataccgagtggatgtcggctgaggattgggatg
accaacccgccctacattttggagcacctcgaggcgatggcggccattctgcggcacccg
cgcgtctacgcctttctgcacattccggtgcaggcgggcgccgacgaggtgctcgccgac
atgaagcgccagtactgcatcgacgacttctgcaccattgtcgactttctcaagcagaga
gtggaaggcatcaccatcgccactgacatcatctgcggcttccccaccgagacggcggcg
aactttgaggagtcgctgcgactgattgagcgctaccgctttccggtccttttcatcaac
cagttctacccgcggccgggcacgccggcggccaagatgcgccgcgtgcccaccgcggag
gtgaagcgccggagcaaggccgccagcgagctcttccaggccattcagccgtacgagggc
cgtgtgggggcccgctaccggggcgtgctgatcaccgaggaggccgccgacggccgtcac
ctggtcggccacaacaagtgctacgagcagatactgctggagaagggcgccgaaggggtg
gccatgggcgccctcatcgacgaggtggagatcgtctccactgggaagtactacatgatc
ggccggcccatttcgcccagtattatctcaaagctgatggccaaagttgagcagcaccaa
caccagaacctgctcttcaccgcctcggcgcttctcctcgccgctgcgctgctctaccga
gggtaccgccatttcaccggctaa
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