Rhagoletis zephyria (snowberry fruit fly): 108375163
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Entry
108375163 CDS
T08513
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108375163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108375163
Enzymes [BR:
rze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108375163
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108375163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
108375163
NCBI-ProteinID:
XP_017486749
LinkDB
All DBs
Position
Unknown
AA seq
1651 aa
AA seq
DB search
MGTQKTLEIDMFPAELEFGVFTSDEIKRLSVVKIITGLTFDPLGHPLPGGLYDNLMGTYG
RRMEPCGTCYNIQACPGHMGYIELNALVFNPFFIKLVQKMLGIFCLNCFKIQLKDHVCEV
LTLQLRLLEAGYIVEAQELEIFKSEVVCQNEENLVKQEGGDYVHPHIAAMFELLKKGESN
ASNNTKTSCAVRSAIVHAALQRVTLKKCMHCQKPLRNIRYLYRKLVYYVTAAEMNSSMPE
AKQTTGQNKSIFADECRKILRQIYVNYPDLLNLLFPLLKQNASRSDCPVDIFFMDTVPVI
PPKARPPNILHDHIVEHPQTAIYRAIIENNAVLRVVMKHLKGLRDELSEEAQRVYETTRG
KSSYEKLYNAWQTLQTSVDMLLDITASRDAPSNQGLKQVLEKKEGLIRKHMMGKRVNYAA
RTVITPDPNINVEEVGIPDIFARKLSYPVPVTPWNVAELRKMVMNGPDIHPGANYIQDEK
GYTTLIPADNAAKRESMAKLLFNYPENGIKVVHRHVINGDVLLLNRQPSLHRPSIMAHKA
RILPGEKTFRLHYSNCKAYNADFDGDEMNAHFPQSEVARAEAYNLVNVASNYLVPKDGTP
LGGLIQDHVISGVKLSIRGRFFNREDYQQLVYQGLSHLRENIKLLPPTILKPTVLWSGKQ
ILSTIIINLIPEGYARINLHTQAKINSKTWIVSQPHEAACSPVGGSDLCESNVIIHKGEL
LTGVLDKQQYGATTYGLIHCMYELYGGEVSTRMLTSFTKVFTSFLQREGFTLGVQDILVT
AEADTQRRHIVKECREIGDSAVAAALDLDEIPSLDMLIQKMEEAYAKDPKFRVILDRKYK
SLLDGFTNDINRTCLPNGLISKFPQNNLQLMVLSGAKGSMVNTMQISCLLGQIELEGKRP
PLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKTSRSG
YLQRCLIKHLEGLTVGYDMTVRDSDNSVVQYLYGEDGLDILKSKFFNTNFCMQFLALNYS
AIIHTNELTSFKDEHTLMKISRHVKKIRKWQRQHNDRHGLEEPKRRLSAFSAFSTDVQAK
GNLNEVNGKTGRSFRDEYKQKLWRKADTETKEHYKRLNVHCPDPTTALYRQDSYYGSVSE
RLEKVVEDYMKKYPNSKAGIDDIMHLKNLKALVSPGEPVGLLAAQSIGEPSTQMTLNTFH
FAGRGEMNVTLGIPRLREILMLASANIKTPSMDIPIKMSLAKNADKLRIKLNRVTLADIL
QYVNVKIKLVLKPERAYQYKLKFQFLPREAYQDDFCVRPKKVLKYMSEVFFKLLFRAVIK
SSKGKASIIDINDGKGNGNKESDDKDLDEDETGNDLNGELKNGKSSNSADVDSSDDENND
DDDATGRKFKSRKEDENEYDDPEDVEEIKDANDDDELAGAEDDVEEVAVTADTDDAMVES
VLNNAMVREYSYDKERHQWCKLTFNLSMIYKKPDISSTIRELAGKCVVHQVQNIKRAIIY
KGDKNAHLLKTDGINIVEMFKHKEILDLNRLYTNDIHAIAKTYGIEAAAQVIIKEVTNVF
KVYGITVDRRHLSLIADYMTFDGTFQPLSRKGMEHSSSPLQQMSFESCLQFLKNASGSGR
VDELSSPSSRLMVGLPVRNGTGAFELLTKIC
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atgggtacccaaaaaactttggagatcgacatgtttccagcagaactggaattcggtgta
tttactagtgatgaaatcaaacgactcagcgttgtcaaaattatcactggcttaacattc
gacccactaggacatcctctgcctggcggcttgtacgataacttaatgggcacttacggg
cgtcgtatggaaccttgcggtacttgttataacatacaagcctgtcccggccacatggga
tacattgagttgaatgcacttgttttcaatccgttttttattaaacttgtgcaaaaaatg
ttgggtattttttgcctaaactgtttcaagattcaattaaaagatcatgtatgtgaagtg
ctgacattgcaattacgtcttctagaggcggggtatatcgtggaagcgcaagagcttgaa
atattcaaatcggaggtcgtctgtcaaaatgaagagaatttggtgaaacaagaaggtggc
gattatgtgcatccacatatagccgctatgttcgaacttttaaagaaaggagaatcaaac
gcttctaataacacgaaaacttcgtgtgcagttcgatcagccatagtacatgcagcgctt
caacgtgttactttgaagaaatgtatgcattgtcaaaagcccttgcggaatattcgttac
ctgtatcgaaaactagtttactatgttactgcggcagagatgaatagttccatgcccgaa
gcaaaacagaccactgggcaaaataagtctattttcgctgatgaatgtcgcaaaattttg
agacaaatttacgtcaattacccggacttattaaaccttttgtttccgcttttaaagcaa
aatgctagtagaagtgattgcccagttgatatatttttcatggatactgtaccagttata
ccgccgaaagcgcgtccgccaaatatattgcatgatcatattgttgaacatccacaaact
gcaatttacagggctataattgaaaataatgccgtattgcgtgtagttatgaagcatctt
aaaggtttacgcgatgagctctcagaagaagcccaacgtgtttacgaaactacacgaggg
aaatcgtcttatgaaaaactgtataatgcttggcaaactttgcaaacatctgttgacatg
ttgttagatataaccgccagcagagatgctccctctaatcaaggtctgaagcaagtcttg
gaaaagaaggagggcctcatacgtaagcatatgatgggcaagcgtgttaactatgcggca
agaactgtcataacgcccgacccaaatattaacgttgaggaagtgggtataccagatatt
ttcgcacgaaaactcagttatccagtgccggtgacaccatggaacgttgcagagttgcgt
aaaatggtgatgaatgggccggatattcaccctggtgccaactatatacaagacgaaaaa
ggttataccacacttataccagctgataatgctgccaagcgtgaaagcatggcaaaatta
cttttcaattatcctgaaaatggtatcaaggttgtgcatcgtcatgtcataaatggagat
gtacttctgctcaatcgtcaaccgtcactccatcgaccatccataatggctcataaggca
cgcatactgcctggtgaaaagacatttcgacttcattactcaaactgcaaggcatacaat
gccgatttcgatggtgatgaaatgaatgcacactttccacaaagcgaagtggcaagagcg
gaggcttataatttggtaaatgtggcaagcaactatttggtgcctaaagacggtacaccc
ctaggaggtttaattcaggatcatgttatttcgggcgtaaaattatctataaggggacgt
ttttttaatcgcgaagactatcaacagctggtataccagggcctttcgcatttacgtgaa
aatataaaattattgcctccaaccattttaaaaccgaccgtgttgtggtctggaaaacag
attctttcaactattatcataaatttgataccagagggatatgcgcgtataaacttgcat
acgcaagctaaaattaattcaaagacttggattgtgtcgcaaccgcatgaagctgcctgc
tctcctgttggtggcagtgatttgtgtgaaagtaatgttataattcataagggagagctg
ctgactggagttttagacaagcaacagtatggtgcaaccacttatggtttaatccattgc
atgtatgagctatatggtggcgaagtatccacacgtatgctaacgtcttttactaaagtt
tttacatcatttttacaacgcgaaggattcacgctaggcgtacaggatattcttgttaca
gctgaagcagacacgcaaaggcgtcatatcgtcaaagaatgccgcgaaattggcgattca
gccgttgctgctgcattagatttggatgaaataccctcgcttgatatgcttattcaaaaa
atggaggaggcatatgcaaaagatcccaaatttcgagtaatcttagatcgtaagtacaag
tcattgttagatggttttactaacgatataaatcgtacctgcttgcccaatggtttgata
tcgaaattcccacaaaataatttgcaattaatggtgttatctggcgcgaagggttccatg
gtgaatactatgcaaatttcatgcttactggggcaaattgaattggaaggcaaacgccca
cctctaatgatttctggaaaatcactaccaagtttcacatccttcgaaacatcaccaaaa
tcgggtggcttcattgatggccgttttatgaccggcatccagccgcaagacttcttcttt
cattgcatggctgggcgcgaaggtcttatcgacactgctgtgaaaacttcacgttcaggc
tacttgcaacgatgtcttataaagcatcttgaaggtctcacagttggttacgatatgaca
gtgcgtgatagtgataacagtgtcgtacagtatttgtatggcgaagatgggctagatata
ctgaagtcgaaatttttcaatacaaatttctgtatgcaattcttggctcttaattactcc
gcaataatacatacaaacgagttgacaagtttcaaagatgagcacacgcttatgaaaatc
tccagacatgtgaagaagatacgaaaatggcaaagacagcataatgataggcatggttta
gaagaaccgaagagaagactctcggcattctccgccttttcaacagatgtgcaagcgaaa
ggcaacttaaatgaggtaaatggtaaaacgggccgtagttttagagatgaatataaacag
aagctgtggagaaaagctgatacagaaacgaaagagcattacaaaaggttaaatgtgcat
tgtcctgatcccacaactgctttatacagacaggatagctattatggcagtgtttccgaa
cgattggagaaagtagtagaggactatatgaagaaatatccaaatagtaaagctggaatt
gatgatataatgcatttaaaaaatcttaaggcattagtctcgccgggcgaacccgttggt
ctcttggccgcccaatcaattggtgaaccttctactcagatgacactgaatactttccat
tttgctggtcgtggtgagatgaacgtcacgctgggtataccacgcttgcgtgaaatttta
atgttggcatcagcaaatatcaaaacgccatcaatggatattccaataaagatgagtctt
gcgaagaatgccgataagttacgcatcaagctgaatcgggtaacgcttgcggacatattg
cagtatgttaatgtgaaaattaagctagttctgaagcctgaacgcgcatatcaatataag
ctgaaattccaatttctgccgcgcgaagcctatcaggacgatttctgcgtgcgtcccaaa
aaggtactgaaatatatgagcgaggtttttttcaagctgctgtttcgcgctgttataaag
tcttcaaagggcaaagcttctattattgatattaacgatggaaaaggaaacggcaacaag
gagagcgacgacaaggatttagacgaagatgaaacaggaaatgatctgaatggcgaattg
aaaaacggaaagtcatcgaattcggcagatgtagattcctctgacgacgaaaataatgac
gatgatgacgccactggcagaaaattcaaatcgcgcaaagaagatgaaaatgaatatgat
gatcctgaagatgtggaagaaatcaaagatgctaacgatgatgatgagttggcaggggct
gaagacgacgtcgaagaggttgcggtcacggctgacacagatgacgctatggtcgagagt
gtattgaacaatgcaatggtgcgagaatattcctacgataaggaaagacatcaatggtgc
aagctaacctttaatctatccatgatatacaagaagccagatatttcatccaccatacgt
gaattagcaggcaaatgtgttgtgcaccaagtacagaatataaaacgcgctattatttat
aaaggtgacaaaaatgcccacctactcaaaacagacgggattaatattgtcgaaatgttc
aaacacaaagaaattttagacttgaaccgcctttataccaatgatatacatgccatagca
aagacttatggcatcgaggcagcggcgcaagttataattaaggaagtaacaaatgttttc
aaagtgtacggaattactgttgatagacgtcatctctccttaattgccgattatatgact
tttgatggtactttccaaccactttcccgaaagggcatggaacattcatcttcacctttg
caacaaatgtcctttgaatcttgcttacaatttctgaaaaatgcgtccggaagtggtcgg
gtagatgagcttagttcaccatcaagtcggttaatggttggactaccagtacgaaatggc
acaggtgccttcgaattgttgacgaaaatttgttaa
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integrated database retrieval system
